| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is trpE [H]
Identifier: 157961416
GI number: 157961416
Start: 1928606
End: 1930189
Strand: Reverse
Name: trpE [H]
Synonym: Spea_1590
Alternate gene names: 157961416
Gene position: 1930189-1928606 (Counterclockwise)
Preceding gene: 157961422
Following gene: 157961415
Centisome position: 37.3
GC content: 49.18
Gene sequence:
>1584_bases ATGACAACCGACACTATCGCTAAAGTCGTCACTCAAAAAGAGGCGTTGGCGTATCATGAAGATCCGCTTAGCTTATACCA GCATGTGACCCAGAACGCCCCTCACACTATGCTGCTGGAATCTGCTGAAATTGATAGCAAGGACCACTTAAAGAGTATCG TGCTGACTCACGCAGCCATGCAGATCCGCTGTGACGGTTACCAACTTCAATTTAACGCATTAACAGATAATGGTAAGACT CTGCTCTCACCAATAAAGTCCTTCTTCGAAAAAGATTTTCCGACCACGGAAATAAACCACTGTGATGAGTCAAGCTTAAG CCTTACCCTGCAAAAAGAGTCTAACCAACTCGATGAGGATGCGCGTTTAAAGTCAACCTCTCCGCTTGATGGCTTAAGAA TGTTGGTTAAGCATATCCGCTGCGATGAAAGCCCCGAGTTTGAAGATCTGTTTTTAGGCGGCGTGCTCTCTTATGATTTG ATTGATACCGTTGAGCCACTGCCAAGCGTGCCTGAAGGTGATAACACCTGCCCTGATTACCTGTTTTATCTCGCCGAAAC GTTAATCCTAGTGGATCATCAGCAGCAAAGCGCTGAAATCGTCACTCACCAATTTGTTCAGCCAGTCCAAAGCGCTGTCG ATTGCATTACAAACTCACTCGCTCAGCGTATGACTGAGCTACAGCAAGCTTGCCAGTCATTGGCTCCCATTGCCGAGTTA CAAGCCGTTGAAGCTGAAACGCAAGTGAATATCTCAGACAGCGACTTTAAAGACACAGTCAATGGCCTTAAAGAGCACAT CATCGCAGGTGATATTTTCCAGGTAGTGCCATCACGCAGTTTTAGCCTGCCTTGCCCCAATACATTAGGCGCCTACCGCG CATTAAGACTGACCAACCCAAGCCCTTACATGTTCTACTTTCGCGGCGATGACTTCACCCTGTTTGGCGCCTCACCAGAG AGCGCGCTCAAGTATGAGGCCGCAAGCAACCAAGTCGAGATCTACCCGATTGCCGGAACGCGAAAGCGCGGCAAAACTGC CAGCGGTGAAATCGATTTCGATCTCGATAGCCGTAACGAGCTTGAGCTTCGCTTAGACAAGAAAGAGTTGTCCGAACATA TCATGCTTGTAGACTTGGCTCGTAACGATATCGCCCGCATCAGCCAAAGTGGTACCCGCAAAGTGCCAGAGTTATTAAAA GTCGATAGATACAGCCATGTTATGCATCTCGTTAGCCGAGTCACTGGCCAGCTTAGAACCGATTTAGATGCACTGCATGC CTACCAAGCTTGCATGAATATGGGCACTTTAACTGGCGCCCCAAAAGTGAGCGCGGCGCAGCTTATTCGCGGTGCAGAGA AAACCCGTCGCGGCAGCTACGGTGGCGCTGTCGGCTACTTAAATGGCCTAGGTGACATGGATACCTGCATTGTTATCCGC TCTGCCTTTGTCAAAGATGGCACAGCCTTTATTCAAGCAGGCGCTGGCGTGGTGTACGACTCAGACCCACAAGCCGAAGC CGATGAAACGCGCCAAAAGGCACAAGCCGTTATTTCAGCTATAAAAATGGGAGGTGGACTATGA
Upstream 100 bases:
>100_bases TAAATCGGCAAGAAGAGAGAAAACCCAGAGCAGCAGGCTTAAAGATAAAGTGAGATAAAATAATGAATAATGCGTTACCC TACAAGGCAGGAGCATAAGC
Downstream 100 bases:
>100_bases AAATCTATCTACTCGATAACTTCGACTCATTCACCTACAACTTAGTGGATCAGTTTAGAAGCTTAGGCTATGAAGTAGTC ATTTATCGTAACGACGTCGA
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MTTDTIAKVVTQKEALAYHEDPLSLYQHVTQNAPHTMLLESAEIDSKDHLKSIVLTHAAMQIRCDGYQLQFNALTDNGKT LLSPIKSFFEKDFPTTEINHCDESSLSLTLQKESNQLDEDARLKSTSPLDGLRMLVKHIRCDESPEFEDLFLGGVLSYDL IDTVEPLPSVPEGDNTCPDYLFYLAETLILVDHQQQSAEIVTHQFVQPVQSAVDCITNSLAQRMTELQQACQSLAPIAEL QAVEAETQVNISDSDFKDTVNGLKEHIIAGDIFQVVPSRSFSLPCPNTLGAYRALRLTNPSPYMFYFRGDDFTLFGASPE SALKYEAASNQVEIYPIAGTRKRGKTASGEIDFDLDSRNELELRLDKKELSEHIMLVDLARNDIARISQSGTRKVPELLK VDRYSHVMHLVSRVTGQLRTDLDALHAYQACMNMGTLTGAPKVSAAQLIRGAEKTRRGSYGGAVGYLNGLGDMDTCIVIR SAFVKDGTAFIQAGAGVVYDSDPQAEADETRQKAQAVISAIKMGGGL
Sequences:
>Translated_527_residues MTTDTIAKVVTQKEALAYHEDPLSLYQHVTQNAPHTMLLESAEIDSKDHLKSIVLTHAAMQIRCDGYQLQFNALTDNGKT LLSPIKSFFEKDFPTTEINHCDESSLSLTLQKESNQLDEDARLKSTSPLDGLRMLVKHIRCDESPEFEDLFLGGVLSYDL IDTVEPLPSVPEGDNTCPDYLFYLAETLILVDHQQQSAEIVTHQFVQPVQSAVDCITNSLAQRMTELQQACQSLAPIAEL QAVEAETQVNISDSDFKDTVNGLKEHIIAGDIFQVVPSRSFSLPCPNTLGAYRALRLTNPSPYMFYFRGDDFTLFGASPE SALKYEAASNQVEIYPIAGTRKRGKTASGEIDFDLDSRNELELRLDKKELSEHIMLVDLARNDIARISQSGTRKVPELLK VDRYSHVMHLVSRVTGQLRTDLDALHAYQACMNMGTLTGAPKVSAAQLIRGAEKTRRGSYGGAVGYLNGLGDMDTCIVIR SAFVKDGTAFIQAGAGVVYDSDPQAEADETRQKAQAVISAIKMGGGL >Mature_526_residues TTDTIAKVVTQKEALAYHEDPLSLYQHVTQNAPHTMLLESAEIDSKDHLKSIVLTHAAMQIRCDGYQLQFNALTDNGKTL LSPIKSFFEKDFPTTEINHCDESSLSLTLQKESNQLDEDARLKSTSPLDGLRMLVKHIRCDESPEFEDLFLGGVLSYDLI DTVEPLPSVPEGDNTCPDYLFYLAETLILVDHQQQSAEIVTHQFVQPVQSAVDCITNSLAQRMTELQQACQSLAPIAELQ AVEAETQVNISDSDFKDTVNGLKEHIIAGDIFQVVPSRSFSLPCPNTLGAYRALRLTNPSPYMFYFRGDDFTLFGASPES ALKYEAASNQVEIYPIAGTRKRGKTASGEIDFDLDSRNELELRLDKKELSEHIMLVDLARNDIARISQSGTRKVPELLKV DRYSHVMHLVSRVTGQLRTDLDALHAYQACMNMGTLTGAPKVSAAQLIRGAEKTRRGSYGGAVGYLNGLGDMDTCIVIRS AFVKDGTAFIQAGAGVVYDSDPQAEADETRQKAQAVISAIKMGGGL
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787518, Length=506, Percent_Identity=53.1620553359684, Blast_Score=504, Evalue=1e-144, Organism=Escherichia coli, GI1788114, Length=421, Percent_Identity=30.4038004750594, Blast_Score=176, Evalue=3e-45, Organism=Escherichia coli, GI1786809, Length=228, Percent_Identity=28.5087719298246, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082077, Length=301, Percent_Identity=25.2491694352159, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=532, Percent_Identity=33.4586466165414, Blast_Score=222, Evalue=9e-59, Organism=Saccharomyces cerevisiae, GI6324361, Length=380, Percent_Identity=22.6315789473684, Blast_Score=80, Evalue=7e-16,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 58047; Mature: 57916
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDTIAKVVTQKEALAYHEDPLSLYQHVTQNAPHTMLLESAEIDSKDHLKSIVLTHAAM CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH QIRCDGYQLQFNALTDNGKTLLSPIKSFFEKDFPTTEINHCDESSLSLTLQKESNQLDED EEEECCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCH ARLKSTSPLDGLRMLVKHIRCDESPEFEDLFLGGVLSYDLIDTVEPLPSVPEGDNTCPDY HHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LFYLAETLILVDHQQQSAEIVTHQFVQPVQSAVDCITNSLAQRMTELQQACQSLAPIAEL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QAVEAETQVNISDSDFKDTVNGLKEHIIAGDIFQVVPSRSFSLPCPNTLGAYRALRLTNP HHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEEECCC SPYMFYFRGDDFTLFGASPESALKYEAASNQVEIYPIAGTRKRGKTASGEIDFDLDSRNE CCEEEEEECCCEEEECCCCHHHHEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCC LELRLDKKELSEHIMLVDLARNDIARISQSGTRKVPELLKVDRYSHVMHLVSRVTGQLRT EEEEECHHHHHCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLDALHAYQACMNMGTLTGAPKVSAAQLIRGAEKTRRGSYGGAVGYLNGLGDMDTCIVIR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHH SAFVKDGTAFIQAGAGVVYDSDPQAEADETRQKAQAVISAIKMGGGL HHHHCCCHHHEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTDTIAKVVTQKEALAYHEDPLSLYQHVTQNAPHTMLLESAEIDSKDHLKSIVLTHAAM CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH QIRCDGYQLQFNALTDNGKTLLSPIKSFFEKDFPTTEINHCDESSLSLTLQKESNQLDED EEEECCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCH ARLKSTSPLDGLRMLVKHIRCDESPEFEDLFLGGVLSYDLIDTVEPLPSVPEGDNTCPDY HHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LFYLAETLILVDHQQQSAEIVTHQFVQPVQSAVDCITNSLAQRMTELQQACQSLAPIAEL HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QAVEAETQVNISDSDFKDTVNGLKEHIIAGDIFQVVPSRSFSLPCPNTLGAYRALRLTNP HHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEEECCC SPYMFYFRGDDFTLFGASPESALKYEAASNQVEIYPIAGTRKRGKTASGEIDFDLDSRNE CCEEEEEECCCEEEECCCCHHHHEECCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCC LELRLDKKELSEHIMLVDLARNDIARISQSGTRKVPELLKVDRYSHVMHLVSRVTGQLRT EEEEECHHHHHCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLDALHAYQACMNMGTLTGAPKVSAAQLIRGAEKTRRGSYGGAVGYLNGLGDMDTCIVIR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHH SAFVKDGTAFIQAGAGVVYDSDPQAEADETRQKAQAVISAIKMGGGL HHHHCCCHHHEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]