| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961422
Identifier: 157961422
GI number: 157961422
Start: 1934192
End: 1934776
Strand: Reverse
Name: 157961422
Synonym: Spea_1596
Alternate gene names: NA
Gene position: 1934776-1934192 (Counterclockwise)
Preceding gene: 157961424
Following gene: 157961416
Centisome position: 37.39
GC content: 40.34
Gene sequence:
>585_bases ATGGAAGCCAACGCCTTACCTAATGATATCGGCTCAAAAATTTCCTCAACACTCATCGAAAACTTAGATGCGGCCAACTT CTGTGACCATGTTCATCGACATTTTACCAATGTACCGCCCACGAGAGAACGAGTACTCGATCGCCTTATCGTCCATAAAT TTGAAGATTACTATACTCAAATTGTTGAAGTCATTTCAGAAAAAAAACATAAAGCCCGTCGCATAGGCGATCTATTTGAT GTTATTCCCAGAGGAGAATGTCTCGATCTATTCTTAGATTTAATAAAGGAACACTGTATGGGTACAGAACAAATTAAAAA GTTCTCCCAAGACATTGAATTGTTGACTCTAATCTTTTCCACTAAGGCAGGCATAGAGTGGGATCGGTTATACGCCAGCA ATGAATATGAAATCTGCATGACAGAGCTTTTTTCAACAATCTTCCACCGCCTTACAGACCGAAGCGTGCCGATCCCTGCG CTAAATACCAAGTTAAATGATAAATACCAAGCCGAGCGCATCAACAAACTACTACGCCATATGAGTAAATTATGGCTGAA CCAACATAGCGACTACTCAATATAG
Upstream 100 bases:
>100_bases CAATTTGAAATGTTCAAAAAAAGATTTCTGCCCGTATCCCTGCAATAGCAGACTTCCTCGACAATTCGACTCCTATATAT CCTTAGGTATAGAAAAGGTA
Downstream 100 bases:
>100_bases AAACTTTACCTACAACAAGTTATTTTGAGTAGATTACTCATCATCCAGCCTCATCGCCTCTTTGATTTCATCACTGTTGA AGCCCTTACGTGATAAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MEANALPNDIGSKISSTLIENLDAANFCDHVHRHFTNVPPTRERVLDRLIVHKFEDYYTQIVEVISEKKHKARRIGDLFD VIPRGECLDLFLDLIKEHCMGTEQIKKFSQDIELLTLIFSTKAGIEWDRLYASNEYEICMTELFSTIFHRLTDRSVPIPA LNTKLNDKYQAERINKLLRHMSKLWLNQHSDYSI
Sequences:
>Translated_194_residues MEANALPNDIGSKISSTLIENLDAANFCDHVHRHFTNVPPTRERVLDRLIVHKFEDYYTQIVEVISEKKHKARRIGDLFD VIPRGECLDLFLDLIKEHCMGTEQIKKFSQDIELLTLIFSTKAGIEWDRLYASNEYEICMTELFSTIFHRLTDRSVPIPA LNTKLNDKYQAERINKLLRHMSKLWLNQHSDYSI >Mature_194_residues MEANALPNDIGSKISSTLIENLDAANFCDHVHRHFTNVPPTRERVLDRLIVHKFEDYYTQIVEVISEKKHKARRIGDLFD VIPRGECLDLFLDLIKEHCMGTEQIKKFSQDIELLTLIFSTKAGIEWDRLYASNEYEICMTELFSTIFHRLTDRSVPIPA LNTKLNDKYQAERINKLLRHMSKLWLNQHSDYSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22720; Mature: 22720
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEANALPNDIGSKISSTLIENLDAANFCDHVHRHFTNVPPTRERVLDRLIVHKFEDYYTQ CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IVEVISEKKHKARRIGDLFDVIPRGECLDLFLDLIKEHCMGTEQIKKFSQDIELLTLIFS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH TKAGIEWDRLYASNEYEICMTELFSTIFHRLTDRSVPIPALNTKLNDKYQAERINKLLRH HHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH MSKLWLNQHSDYSI HHHHHHCCCCCCCC >Mature Secondary Structure MEANALPNDIGSKISSTLIENLDAANFCDHVHRHFTNVPPTRERVLDRLIVHKFEDYYTQ CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IVEVISEKKHKARRIGDLFDVIPRGECLDLFLDLIKEHCMGTEQIKKFSQDIELLTLIFS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH TKAGIEWDRLYASNEYEICMTELFSTIFHRLTDRSVPIPALNTKLNDKYQAERINKLLRH HHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH MSKLWLNQHSDYSI HHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA