Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

Click here to switch to the map view.

The map label for this gene is 157826333

Identifier: 157826333

GI number: 157826333

Start: 1186519

End: 1187472

Strand: Reverse

Name: 157826333

Synonym: A1C_06610

Alternate gene names: NA

Gene position: 1187472-1186519 (Counterclockwise)

Preceding gene: 157826334

Following gene: 157826332

Centisome position: 96.46

GC content: 26.62

Gene sequence:

>954_bases
ATGAATAATGCAATAGTACTTAATAACATAAATACTAATTTATTTAAAAAAGATATTGTTAATAATTTTGTCAATAATCT
TACGCAATCTACTTGCTCTACTATTGCAAATATGCTGGCTATAGATTATACGCTAAGGCTTAATTCTAAGCCGGAAGCTG
AAAAATATATTAATAAATGTATTTCTAGACTCAAAAATTATTTAGGTATGCGGGTTATTAATGATGATAATTTTTCCGTA
GCATTGGAGTTATTTGCAATAATGATTACTTCTGAAAATGAAAATGAGCAAAATAAGAATAATATTTTACAGCAATCACA
AGATATAATAGCAGAAAATCTTGTAGAGGTTTATTTTGGAGATAAAAAAATAAATAGTACCGAAAAAGAAAAAGTTAAAA
ATATATTTAAAACTCTTTTAAAAGAGAAGAATTGTGACAAAATAATAAACTATGCGGAATCTAATAAAAAATTATTTAAG
GCTTCTGTAATGTATGCAATGAAGAAATATAATAATATTGATGAAGCAACAATCTATATAAAGAAAGAATTTAATAAAAT
ATTCGAAATGTCTTTAGCATTTACACAAAAAAGTAATATGTTTAAACAAGCAACCGGAAAAATTGCCGGTGCTGTTTGTG
CTTTACTAGTCGGAGCAATTAGTGTTGCGACTGCGGGAGCGGCTTTTTCTATCATAGTTGTACCGGCATCAATTTTTGCT
GTCAGATATGCACCCGAACTTGGGGAAAAAATTGGAGGGTTAATTTTAAATAATGATAATGCAATAAAACTAGAACAAAG
CAATATAGATAAGTTTATGAAAACATTACAAAATGATAAAGAAAGTCTTCTATCTCAAGAAAAAACAAAAAACATTAAAC
AAAATATTAAAGTTTCTCCTTCTCAAATAAATGCTCAATTAACTAAGAAAGTGATTAATGAAAAATATAGATAG

Upstream 100 bases:

>100_bases
CAAGAATATATATAAACTTTCAGTGAATCATGCTCCTAATCTTATTTATGCTAAATTGATATTATATATCAGAGAATTAG
CCTCAAAATAAATTACTAAA

Downstream 100 bases:

>100_bases
GGTATCGTAATTGCGAGTGACTGTAGATGTTGCCCGTATGGTTCGAAAGACTTACTCGATGTCATTCCTGCGAGGCATTG
GCGTTATTCCATGGATAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNNAIVLNNINTNLFKKDIVNNFVNNLTQSTCSTIANMLAIDYTLRLNSKPEAEKYINKCISRLKNYLGMRVINDDNFSV
ALELFAIMITSENENEQNKNNILQQSQDIIAENLVEVYFGDKKINSTEKEKVKNIFKTLLKEKNCDKIINYAESNKKLFK
ASVMYAMKKYNNIDEATIYIKKEFNKIFEMSLAFTQKSNMFKQATGKIAGAVCALLVGAISVATAGAAFSIIVVPASIFA
VRYAPELGEKIGGLILNNDNAIKLEQSNIDKFMKTLQNDKESLLSQEKTKNIKQNIKVSPSQINAQLTKKVINEKYR

Sequences:

>Translated_317_residues
MNNAIVLNNINTNLFKKDIVNNFVNNLTQSTCSTIANMLAIDYTLRLNSKPEAEKYINKCISRLKNYLGMRVINDDNFSV
ALELFAIMITSENENEQNKNNILQQSQDIIAENLVEVYFGDKKINSTEKEKVKNIFKTLLKEKNCDKIINYAESNKKLFK
ASVMYAMKKYNNIDEATIYIKKEFNKIFEMSLAFTQKSNMFKQATGKIAGAVCALLVGAISVATAGAAFSIIVVPASIFA
VRYAPELGEKIGGLILNNDNAIKLEQSNIDKFMKTLQNDKESLLSQEKTKNIKQNIKVSPSQINAQLTKKVINEKYR
>Mature_317_residues
MNNAIVLNNINTNLFKKDIVNNFVNNLTQSTCSTIANMLAIDYTLRLNSKPEAEKYINKCISRLKNYLGMRVINDDNFSV
ALELFAIMITSENENEQNKNNILQQSQDIIAENLVEVYFGDKKINSTEKEKVKNIFKTLLKEKNCDKIINYAESNKKLFK
ASVMYAMKKYNNIDEATIYIKKEFNKIFEMSLAFTQKSNMFKQATGKIAGAVCALLVGAISVATAGAAFSIIVVPASIFA
VRYAPELGEKIGGLILNNDNAIKLEQSNIDKFMKTLQNDKESLLSQEKTKNIKQNIKVSPSQINAQLTKKVINEKYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020180
- ProDom:   PD214932 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35774; Mature: 35774

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNAIVLNNINTNLFKKDIVNNFVNNLTQSTCSTIANMLAIDYTLRLNSKPEAEKYINKC
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHH
ISRLKNYLGMRVINDDNFSVALELFAIMITSENENEQNKNNILQQSQDIIAENLVEVYFG
HHHHHHHHCEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DKKINSTEKEKVKNIFKTLLKEKNCDKIINYAESNKKLFKASVMYAMKKYNNIDEATIYI
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEH
KKEFNKIFEMSLAFTQKSNMFKQATGKIAGAVCALLVGAISVATAGAAFSIIVVPASIFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHHH
VRYAPELGEKIGGLILNNDNAIKLEQSNIDKFMKTLQNDKESLLSQEKTKNIKQNIKVSP
HHHCHHHHHHHCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SQINAQLTKKVINEKYR
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNAIVLNNINTNLFKKDIVNNFVNNLTQSTCSTIANMLAIDYTLRLNSKPEAEKYINKC
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHH
ISRLKNYLGMRVINDDNFSVALELFAIMITSENENEQNKNNILQQSQDIIAENLVEVYFG
HHHHHHHHCEEEECCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
DKKINSTEKEKVKNIFKTLLKEKNCDKIINYAESNKKLFKASVMYAMKKYNNIDEATIYI
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEH
KKEFNKIFEMSLAFTQKSNMFKQATGKIAGAVCALLVGAISVATAGAAFSIIVVPASIFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEHHHHHH
VRYAPELGEKIGGLILNNDNAIKLEQSNIDKFMKTLQNDKESLLSQEKTKNIKQNIKVSP
HHHCHHHHHHHCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SQINAQLTKKVINEKYR
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]