Definition Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence.
Accession NC_009784
Length 2,204,018

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The map label for this gene is 156978081

Identifier: 156978081

GI number: 156978081

Start: 1988137

End: 1988595

Strand: Reverse

Name: 156978081

Synonym: VIBHAR_06885

Alternate gene names: NA

Gene position: 1988595-1988137 (Counterclockwise)

Preceding gene: 156978082

Following gene: 156978080

Centisome position: 90.23

GC content: 48.8

Gene sequence:

>459_bases
ATGACCTGTTTGTCGGTGACGGCAACCGATCTTGATAATGCGCTTGGCCTTCTTTATCAAAAGCCGATGCTGTCTTGTAC
AGAGCAGCAAGTTAAAGATGAGCTATTGTTTCAACTCTTCGGACAACTAGATTTACTGGATCACTTGGCCTACAAAGGTT
TCAGAGTGGGGCTAGGGGCTAAAATGGTCACGCCGCAAGAGCTGGATGCTCTGTATGCCGATCACTTTCATGGCGATGTC
GTTATCAATGAAAGTGGCCAGTCTCGTTGCTGGGTCTTGCAACATGCATTAACGCAACCAACGGCTCAGAGTACGCTCTC
GACTACCGTGAAACACTTCTCTAACGTCTTCTTAAGCGGCGAGTACTTGTCTGATCCAAGGCAAACTTGGCGAGTCCCTG
TTACGCTAGAACGCTGCATTGAAACCGCCAATCTATGTGCGATGGATGTGGCTGCGTGA

Upstream 100 bases:

>100_bases
GATACCTTCGGTATTGAAGAGTAGGACGGTTGGTTTGGTCCTCGATTCTCCTTGGGGGTTAAGTTATCACGTGACCACGC
GAAATACGCCCCGAGGCGAA

Downstream 100 bases:

>100_bases
GCCCTCTCTGAGAGTGAGGAGAGTTAATGAAGTCACTGGTCTACTCCCCATTATCATGTGGGCTGTTTCTGATACTTTGC
TTAGTTTATGGCAGTGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTCLSVTATDLDNALGLLYQKPMLSCTEQQVKDELLFQLFGQLDLLDHLAYKGFRVGLGAKMVTPQELDALYADHFHGDV
VINESGQSRCWVLQHALTQPTAQSTLSTTVKHFSNVFLSGEYLSDPRQTWRVPVTLERCIETANLCAMDVAA

Sequences:

>Translated_152_residues
MTCLSVTATDLDNALGLLYQKPMLSCTEQQVKDELLFQLFGQLDLLDHLAYKGFRVGLGAKMVTPQELDALYADHFHGDV
VINESGQSRCWVLQHALTQPTAQSTLSTTVKHFSNVFLSGEYLSDPRQTWRVPVTLERCIETANLCAMDVAA
>Mature_151_residues
TCLSVTATDLDNALGLLYQKPMLSCTEQQVKDELLFQLFGQLDLLDHLAYKGFRVGLGAKMVTPQELDALYADHFHGDVV
INESGQSRCWVLQHALTQPTAQSTLSTTVKHFSNVFLSGEYLSDPRQTWRVPVTLERCIETANLCAMDVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16907; Mature: 16775

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCLSVTATDLDNALGLLYQKPMLSCTEQQVKDELLFQLFGQLDLLDHLAYKGFRVGLGA
CCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC
KMVTPQELDALYADHFHGDVVINESGQSRCWVLQHALTQPTAQSTLSTTVKHFSNVFLSG
CCCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
EYLSDPRQTWRVPVTLERCIETANLCAMDVAA
HHHCCCHHHEECCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TCLSVTATDLDNALGLLYQKPMLSCTEQQVKDELLFQLFGQLDLLDHLAYKGFRVGLGA
CEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC
KMVTPQELDALYADHFHGDVVINESGQSRCWVLQHALTQPTAQSTLSTTVKHFSNVFLSG
CCCCHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
EYLSDPRQTWRVPVTLERCIETANLCAMDVAA
HHHCCCHHHEECCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA