| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669751
Identifier: 15669751
GI number: 15669751
Start: 1532696
End: 1533634
Strand: Direct
Name: 15669751
Synonym: MJ1556
Alternate gene names: NA
Gene position: 1532696-1533634 (Clockwise)
Preceding gene: 15669750
Following gene: 15669752
Centisome position: 92.06
GC content: 28.65
Gene sequence:
>939_bases ATGATGGATAAGATAATTCAAACACTTACATTGACATTTACTTTTTTGTATTACAGCATTCCAATGCTTATTGTTGGTTT ATTTATCTCTCAAATTCTCATAGAGAGTAATATCATCAAAAAAATCTATTTTATTGGAAAGATATTTACAAGATTGGCAA ATCTTCCAGAGGAGTGTGGGATAGCTATAACAACATCTTTTATTGAACCAAGAATGGCAAACATAATGCTTGTAGATTTT TATAAAAAAGGGATTATAAACAAAAAAGAACTCTATATCTCATCTTTAATAGATGCATTTCCGGCAATGCTTAGGCACTG GGATTCTTTATTGCCAATTTTGCTTGCCACCTTAGGATTCTTTGGAATAATCTATTTTATAATCTTAGTTTTGATTGGAT TTATTCAAACACTCATTTTTATGGCTATTGGAAAGATAACATTAAAAAATAGGGAGTATAAAGAAGATAACACAGACAAA AAGATAAAACTAAATAAAGATGTTGTTTATACAGCTTTTAAAAACACTATAAAGTATGGAATTCCAATAATAAGGGATAT AACAATAGCCTCCATTATAACCTCATTTTTGATTGAATTTGGATTTTTTGACTATATAACTGAGATTATAAAAAATAAAG CTTATTATCTACCACTTTCAGTTGAAGAAATTACTGTGGCAGTTACCCAACCAATAAACTACATAGGAGCTTTTGTCTTA GCTGGAGAGTTTTTAAATAGGGGAATTTTAGATGAGATTGAAGTTGTAAGAGCTTTACTTCTTGGCTCTATATTATCAAG CATTCCAGCGTTGAGATTTTTAGCTCCATATTATATAGGCATATATGGATTTAAAGATGGTTTTAATTTGATGATGATAT CTACATTAGTTAGAATTTTGATAACTGCGTTGTTTGTGATAATAACTTTAATATTGTGA
Upstream 100 bases:
>100_bases GCAAGAGAACATTAGAGAGTGTGTTTTATTCCCAAGAGATAGGCAGAGATTAACTCCATAATTTTTAAATACTTTTTAAT GAGAAATTAATAAGATTATT
Downstream 100 bases:
>100_bases GATTATGGGTATAAAATATCAAAAGATTGGAGATGTTGTTATCGTTAAAAAAGAATTAAGTGAGGATGAAATTAGAGAGA TTGTAAAAAGAACTAAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MMDKIIQTLTLTFTFLYYSIPMLIVGLFISQILIESNIIKKIYFIGKIFTRLANLPEECGIAITTSFIEPRMANIMLVDF YKKGIINKKELYISSLIDAFPAMLRHWDSLLPILLATLGFFGIIYFIILVLIGFIQTLIFMAIGKITLKNREYKEDNTDK KIKLNKDVVYTAFKNTIKYGIPIIRDITIASIITSFLIEFGFFDYITEIIKNKAYYLPLSVEEITVAVTQPINYIGAFVL AGEFLNRGILDEIEVVRALLLGSILSSIPALRFLAPYYIGIYGFKDGFNLMMISTLVRILITALFVIITLIL
Sequences:
>Translated_312_residues MMDKIIQTLTLTFTFLYYSIPMLIVGLFISQILIESNIIKKIYFIGKIFTRLANLPEECGIAITTSFIEPRMANIMLVDF YKKGIINKKELYISSLIDAFPAMLRHWDSLLPILLATLGFFGIIYFIILVLIGFIQTLIFMAIGKITLKNREYKEDNTDK KIKLNKDVVYTAFKNTIKYGIPIIRDITIASIITSFLIEFGFFDYITEIIKNKAYYLPLSVEEITVAVTQPINYIGAFVL AGEFLNRGILDEIEVVRALLLGSILSSIPALRFLAPYYIGIYGFKDGFNLMMISTLVRILITALFVIITLIL >Mature_312_residues MMDKIIQTLTLTFTFLYYSIPMLIVGLFISQILIESNIIKKIYFIGKIFTRLANLPEECGIAITTSFIEPRMANIMLVDF YKKGIINKKELYISSLIDAFPAMLRHWDSLLPILLATLGFFGIIYFIILVLIGFIQTLIFMAIGKITLKNREYKEDNTDK KIKLNKDVVYTAFKNTIKYGIPIIRDITIASIITSFLIEFGFFDYITEIIKNKAYYLPLSVEEITVAVTQPINYIGAFVL AGEFLNRGILDEIEVVRALLLGSILSSIPALRFLAPYYIGIYGFKDGFNLMMISTLVRILITALFVIITLIL
Specific function: Unknown
COG id: COG3366
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1556_METJA (Q58951)
Other databases:
- EMBL: L77117 - PIR: C64494 - RefSeq: NP_248564.1 - ProteinModelPortal: Q58951 - GeneID: 1452464 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1556 - NMPDR: fig|243232.1.peg.1601 - TIGR: MJ1556 - OMA: PRMANIM - ProtClustDB: CLSK2517750 - BioCyc: MJAN243232:MJ_1556-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35563; Mature: 35563
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc1df7a0)-; HASH(0xe97e238)-; HASH(0xec48908)-; HASH(0xddf3bb4)-; HASH(0xef133d0)-; HASH(0xb847c78)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDKIIQTLTLTFTFLYYSIPMLIVGLFISQILIESNIIKKIYFIGKIFTRLANLPEECG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC IAITTSFIEPRMANIMLVDFYKKGIINKKELYISSLIDAFPAMLRHWDSLLPILLATLGF CEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGIIYFIILVLIGFIQTLIFMAIGKITLKNREYKEDNTDKKIKLNKDVVYTAFKNTIKYG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHC IPIIRDITIASIITSFLIEFGFFDYITEIIKNKAYYLPLSVEEITVAVTQPINYIGAFVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEHHHHHHHHHHHHHHHHHHHH AGEFLNRGILDEIEVVRALLLGSILSSIPALRFLAPYYIGIYGFKDGFNLMMISTLVRIL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH ITALFVIITLIL HHHHHHHHHHHH >Mature Secondary Structure MMDKIIQTLTLTFTFLYYSIPMLIVGLFISQILIESNIIKKIYFIGKIFTRLANLPEECG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC IAITTSFIEPRMANIMLVDFYKKGIINKKELYISSLIDAFPAMLRHWDSLLPILLATLGF CEEEHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGIIYFIILVLIGFIQTLIFMAIGKITLKNREYKEDNTDKKIKLNKDVVYTAFKNTIKYG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHC IPIIRDITIASIITSFLIEFGFFDYITEIIKNKAYYLPLSVEEITVAVTQPINYIGAFVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECEEHHHHHHHHHHHHHHHHHHHH AGEFLNRGILDEIEVVRALLLGSILSSIPALRFLAPYYIGIYGFKDGFNLMMISTLVRIL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH ITALFVIITLIL HHHHHHHHHHHH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087