Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669737

Identifier: 15669737

GI number: 15669737

Start: 1518738

End: 1521164

Strand: Reverse

Name: 15669737

Synonym: MJ1542

Alternate gene names: NA

Gene position: 1521164-1518738 (Counterclockwise)

Preceding gene: 15669739

Following gene: 15669736

Centisome position: 91.36

GC content: 26.78

Gene sequence:

>2427_bases
ATGGTGAAATTTATGAAAATAAAGTCAATAGCCGCTAAGAATTTACTATCATTTGATGATTTTAAAATAACATTTGAGGA
TGGGGATGTTGTTACAATCTTCGGCCCCAATAATGTAGGAAAAACAAACTTATTTAGGGTTTTAAAATTACTAAGAAACA
TTATAAATGAGAAAATATCAGCAGTAGATTTGGAAATATATTTACACAATAAAAATTTAAAAGCGGCAAAGATAGAGGTA
GATGTGATATTTGACAAGAGTGATAAAGAGGTTATTGCCAAATTTCTTAAAATTTTCTTCAAAATAAATGCTCCAGATTT
GATAAGACTATGTAACAACTTAAAGCTGAACATTATCAATAGTATTATTGATTATTTTTCAGCAGGGTCATATATTTGGG
AGTGCTCTGAATTAAGGTGCTATAGACCATATTTTATGCTTAGATTGAGAAGTTTAGAAGAAGATATTGAAAAAATAAAA
ATATACTTGAAAGAACGTGAATTATCAGAGATTACACCAGATTTAATTGACCATAGTAAGGTTATACATGAGTTGGACAG
AAATGTTGAGATTATAGAAGTTACAAATGATTTAAAAAACATTATAACATCATCTGTAAATGCATTAATTACAATTTATG
AAAAAAATGAGAAATTATTCTTTAGCACATTAATTGATGGTAAGGAGAATATCACAACAAGAATTGGAGATGGAAATATA
GAAAATATTGTTGAAATCTCAATGAAAGATTTTACAAAAGACATTGAGAAATATGAAGATTGTTTTAAAAGATTAACAAT
GGATAAAAACATATTGAGAGCATTTGTTGTATTATTGGCTTTGGATAAACTCTTAGCCAATAAAATGTCAATATATGTTA
AGAAGGTTTTAGAATATTCAAAAGAAAATCCATGGGACAAAGAAATTATTGAAGATTTAAAATATATTGTAAGATTTTGT
GGATTTGATTATAGGGACATATATGAAATTAGTGATATCTCACTAAATGATATTTTATTAAAAATATATGAAAACAGTCT
AATATTTTATGAGGATTATTTACCAAATGAAGGCAAAGTAATGATTCCAGATTATATGATAGTTGAATTACTTGCTGGTT
TAAAGAATAACAGTTTAGAAAAAAATGTGAAATCTAAAATATTGGAATTATTCAAAACATCCACAACAAAAGACGATTTA
TATTTAGGTATATTAAGCATGCCATCTGAAAAATGGATACCCAGTTATTTGTTTTACTTAAAGAATAATGCAAATCTAAA
GCTAAGAAAAAGATATATGAAAATTAAAGAGATGTTTGAATATATATTTAATAGTGGAAGTCTTAGTTTTGATGTAATTT
TAGCTAATAATAAACCAGATATTGTAGTATATTCAGAAGACATTGAGATACCTCTGAACATGGTAGGACTTGGTGTGAAA
AAAATCTTAGAAATTCTAACTTTAGTATTTGGGTATGAGTCAAAGGTTATTTTACTTGATACTCCATTTAATCAACTTTA
CCCAAAATATCAAAAGAGATTTTCAAAGATTCTTAAAGATACTGAGAATATTGACTCACAGGTATTTATAATCTTACATT
CTCCATATTTCATAAACAATGAAAATATATTCAATACATTTAGATTTTATAAACCTAAAAAATCCACCAAATACATATGT
ATTGGGAGTATAATCAAAGACTTGGAAAAAACGTTTGGGACAGTAATTTTAGATAGAACTACCAGAAAGATATTACTATC
TGACGCTGTAATTCTTTTAAGCTCTGCTTTAAGGGACATTCCATTATTCGACTTAGCTGAATACGAAGATATACCAATAG
ACGAATATAATATCGAAGTTATTCGCCCGCAAAACACTTTAAGTTTTGGAAAATATTATGCTCTACTTCAATATACTTCC
ATCCCATATATTCTTATGCTTAGAAGTTGGATACTTTATAACTTATATGAAGAAATAAAAGATGGTGAAGGAAAAGTTAG
ATACAAACTATTAGAAAAAGGAAAGTATCATAAAATAGTAGAGGAACGCCTTAATTTCTTTAAAAATAGACATCCATTTT
GGATTTCTAAAGAAGAGTTCGATAAAGTTATAAATATTTATATTAAAACTTTGGAAGCTCATAGGGAAAAACTTATTGAG
TTAGGATACATATATCTCTCATCTAAAGAAGAAGTAGTTAAATACTGTATAGAACCATTAAGAAAGCAGTTAGAGGATAT
CTTAAGAAAGAAGTTGTTTATATTTACCGTCCCTACAGATTTCATAATCGAACCACAAGACTTGAAAAACATTCAGATTG
AGAAAGATAAATATATCGTTCATAACTATATTGGTTACAGAAAAGATGTATTAAAGGAATTCAAAGAATTCTTTGATTAC
TTTGTTAAATTCCACAATTTACAGTAA

Upstream 100 bases:

>100_bases
AACACAACTAAATTATAGTGAAATAAATTTAAAACATAAATGTTGGTTATAAACGATATTTAGCAATTACACGGAGAGCA
TTATCCTAAAATTAAATAGT

Downstream 100 bases:

>100_bases
TACAAGGTGAAACAGTGATATTGATAAAAAATGTATTTGTAAATGGGAAGAGACAGGATATACTAATTGAAGGAAATAAA
ATAAAAAAGATTGGAGAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 808; Mature: 808

Protein sequence:

>808_residues
MVKFMKIKSIAAKNLLSFDDFKITFEDGDVVTIFGPNNVGKTNLFRVLKLLRNIINEKISAVDLEIYLHNKNLKAAKIEV
DVIFDKSDKEVIAKFLKIFFKINAPDLIRLCNNLKLNIINSIIDYFSAGSYIWECSELRCYRPYFMLRLRSLEEDIEKIK
IYLKERELSEITPDLIDHSKVIHELDRNVEIIEVTNDLKNIITSSVNALITIYEKNEKLFFSTLIDGKENITTRIGDGNI
ENIVEISMKDFTKDIEKYEDCFKRLTMDKNILRAFVVLLALDKLLANKMSIYVKKVLEYSKENPWDKEIIEDLKYIVRFC
GFDYRDIYEISDISLNDILLKIYENSLIFYEDYLPNEGKVMIPDYMIVELLAGLKNNSLEKNVKSKILELFKTSTTKDDL
YLGILSMPSEKWIPSYLFYLKNNANLKLRKRYMKIKEMFEYIFNSGSLSFDVILANNKPDIVVYSEDIEIPLNMVGLGVK
KILEILTLVFGYESKVILLDTPFNQLYPKYQKRFSKILKDTENIDSQVFIILHSPYFINNENIFNTFRFYKPKKSTKYIC
IGSIIKDLEKTFGTVILDRTTRKILLSDAVILLSSALRDIPLFDLAEYEDIPIDEYNIEVIRPQNTLSFGKYYALLQYTS
IPYILMLRSWILYNLYEEIKDGEGKVRYKLLEKGKYHKIVEERLNFFKNRHPFWISKEEFDKVINIYIKTLEAHREKLIE
LGYIYLSSKEEVVKYCIEPLRKQLEDILRKKLFIFTVPTDFIIEPQDLKNIQIEKDKYIVHNYIGYRKDVLKEFKEFFDY
FVKFHNLQ

Sequences:

>Translated_808_residues
MVKFMKIKSIAAKNLLSFDDFKITFEDGDVVTIFGPNNVGKTNLFRVLKLLRNIINEKISAVDLEIYLHNKNLKAAKIEV
DVIFDKSDKEVIAKFLKIFFKINAPDLIRLCNNLKLNIINSIIDYFSAGSYIWECSELRCYRPYFMLRLRSLEEDIEKIK
IYLKERELSEITPDLIDHSKVIHELDRNVEIIEVTNDLKNIITSSVNALITIYEKNEKLFFSTLIDGKENITTRIGDGNI
ENIVEISMKDFTKDIEKYEDCFKRLTMDKNILRAFVVLLALDKLLANKMSIYVKKVLEYSKENPWDKEIIEDLKYIVRFC
GFDYRDIYEISDISLNDILLKIYENSLIFYEDYLPNEGKVMIPDYMIVELLAGLKNNSLEKNVKSKILELFKTSTTKDDL
YLGILSMPSEKWIPSYLFYLKNNANLKLRKRYMKIKEMFEYIFNSGSLSFDVILANNKPDIVVYSEDIEIPLNMVGLGVK
KILEILTLVFGYESKVILLDTPFNQLYPKYQKRFSKILKDTENIDSQVFIILHSPYFINNENIFNTFRFYKPKKSTKYIC
IGSIIKDLEKTFGTVILDRTTRKILLSDAVILLSSALRDIPLFDLAEYEDIPIDEYNIEVIRPQNTLSFGKYYALLQYTS
IPYILMLRSWILYNLYEEIKDGEGKVRYKLLEKGKYHKIVEERLNFFKNRHPFWISKEEFDKVINIYIKTLEAHREKLIE
LGYIYLSSKEEVVKYCIEPLRKQLEDILRKKLFIFTVPTDFIIEPQDLKNIQIEKDKYIVHNYIGYRKDVLKEFKEFFDY
FVKFHNLQ
>Mature_808_residues
MVKFMKIKSIAAKNLLSFDDFKITFEDGDVVTIFGPNNVGKTNLFRVLKLLRNIINEKISAVDLEIYLHNKNLKAAKIEV
DVIFDKSDKEVIAKFLKIFFKINAPDLIRLCNNLKLNIINSIIDYFSAGSYIWECSELRCYRPYFMLRLRSLEEDIEKIK
IYLKERELSEITPDLIDHSKVIHELDRNVEIIEVTNDLKNIITSSVNALITIYEKNEKLFFSTLIDGKENITTRIGDGNI
ENIVEISMKDFTKDIEKYEDCFKRLTMDKNILRAFVVLLALDKLLANKMSIYVKKVLEYSKENPWDKEIIEDLKYIVRFC
GFDYRDIYEISDISLNDILLKIYENSLIFYEDYLPNEGKVMIPDYMIVELLAGLKNNSLEKNVKSKILELFKTSTTKDDL
YLGILSMPSEKWIPSYLFYLKNNANLKLRKRYMKIKEMFEYIFNSGSLSFDVILANNKPDIVVYSEDIEIPLNMVGLGVK
KILEILTLVFGYESKVILLDTPFNQLYPKYQKRFSKILKDTENIDSQVFIILHSPYFINNENIFNTFRFYKPKKSTKYIC
IGSIIKDLEKTFGTVILDRTTRKILLSDAVILLSSALRDIPLFDLAEYEDIPIDEYNIEVIRPQNTLSFGKYYALLQYTS
IPYILMLRSWILYNLYEEIKDGEGKVRYKLLEKGKYHKIVEERLNFFKNRHPFWISKEEFDKVINIYIKTLEAHREKLIE
LGYIYLSSKEEVVKYCIEPLRKQLEDILRKKLFIFTVPTDFIIEPQDLKNIQIEKDKYIVHNYIGYRKDVLKEFKEFFDY
FVKFHNLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1542_METJA (Q58937)

Other databases:

- EMBL:   L77117
- PIR:   E64492
- RefSeq:   NP_248550.1
- ProteinModelPortal:   Q58937
- SMR:   Q58937
- GeneID:   1452450
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1542
- NMPDR:   fig|243232.1.peg.1587
- TIGR:   MJ1542
- OMA:   VGKTNLF
- ProtClustDB:   CLSK2517746
- BioCyc:   MJAN243232:MJ_1542-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95565; Mature: 95565

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKFMKIKSIAAKNLLSFDDFKITFEDGDVVTIFGPNNVGKTNLFRVLKLLRNIINEKIS
CCEEHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
AVDLEIYLHNKNLKAAKIEVDVIFDKSDKEVIAKFLKIFFKINAPDLIRLCNNLKLNIIN
EEEEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHH
SIIDYFSAGSYIWECSELRCYRPYFMLRLRSLEEDIEKIKIYLKERELSEITPDLIDHSK
HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VIHELDRNVEIIEVTNDLKNIITSSVNALITIYEKNEKLFFSTLIDGKENITTRIGDGNI
HHHHHCCCCEEEEEHHHHHHHHHHCCCEEEEEEECCCEEEEEEHHCCCCCCEEEECCCCH
ENIVEISMKDFTKDIEKYEDCFKRLTMDKNILRAFVVLLALDKLLANKMSIYVKKVLEYS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KENPWDKEIIEDLKYIVRFCGFDYRDIYEISDISLNDILLKIYENSLIFYEDYLPNEGKV
CCCCCHHHHHHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHCCEEEEECCCCCCCCE
MIPDYMIVELLAGLKNNSLEKNVKSKILELFKTSTTKDDLYLGILSMPSEKWIPSYLFYL
ECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEHEE
KNNANLKLRKRYMKIKEMFEYIFNSGSLSFDVILANNKPDIVVYSEDIEIPLNMVGLGVK
ECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHCCHH
KILEILTLVFGYESKVILLDTPFNQLYPKYQKRFSKILKDTENIDSQVFIILHSPYFINN
HHHHHHHHHHCCCCCEEEEECCHHHHCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEECC
ENIFNTFRFYKPKKSTKYICIGSIIKDLEKTFGTVILDRTTRKILLSDAVILLSSALRDI
CCHHHHHHEECCCCCCCEEEHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHCC
PLFDLAEYEDIPIDEYNIEVIRPQNTLSFGKYYALLQYTSIPYILMLRSWILYNLYEEIK
CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
DGEGKVRYKLLEKGKYHKIVEERLNFFKNRHPFWISKEEFDKVINIYIKTLEAHREKLIE
CCCCCEEHEEHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHH
LGYIYLSSKEEVVKYCIEPLRKQLEDILRKKLFIFTVPTDFIIEPQDLKNIQIEKDKYIV
HHEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCCCEEECCCCHH
HNYIGYRKDVLKEFKEFFDYFVKFHNLQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKFMKIKSIAAKNLLSFDDFKITFEDGDVVTIFGPNNVGKTNLFRVLKLLRNIINEKIS
CCEEHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
AVDLEIYLHNKNLKAAKIEVDVIFDKSDKEVIAKFLKIFFKINAPDLIRLCNNLKLNIIN
EEEEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHH
SIIDYFSAGSYIWECSELRCYRPYFMLRLRSLEEDIEKIKIYLKERELSEITPDLIDHSK
HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VIHELDRNVEIIEVTNDLKNIITSSVNALITIYEKNEKLFFSTLIDGKENITTRIGDGNI
HHHHHCCCCEEEEEHHHHHHHHHHCCCEEEEEEECCCEEEEEEHHCCCCCCEEEECCCCH
ENIVEISMKDFTKDIEKYEDCFKRLTMDKNILRAFVVLLALDKLLANKMSIYVKKVLEYS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KENPWDKEIIEDLKYIVRFCGFDYRDIYEISDISLNDILLKIYENSLIFYEDYLPNEGKV
CCCCCHHHHHHHHHHHHHHHCCCHHHHHEECCCCHHHHHHHHHHCCEEEEECCCCCCCCE
MIPDYMIVELLAGLKNNSLEKNVKSKILELFKTSTTKDDLYLGILSMPSEKWIPSYLFYL
ECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEHEE
KNNANLKLRKRYMKIKEMFEYIFNSGSLSFDVILANNKPDIVVYSEDIEIPLNMVGLGVK
ECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHCCHH
KILEILTLVFGYESKVILLDTPFNQLYPKYQKRFSKILKDTENIDSQVFIILHSPYFINN
HHHHHHHHHHCCCCCEEEEECCHHHHCHHHHHHHHHHHHHHCCCCCEEEEEEECCEEECC
ENIFNTFRFYKPKKSTKYICIGSIIKDLEKTFGTVILDRTTRKILLSDAVILLSSALRDI
CCHHHHHHEECCCCCCCEEEHHHHHHHHHHHHCEEEECCHHHHHHHHHHHHHHHHHHHCC
PLFDLAEYEDIPIDEYNIEVIRPQNTLSFGKYYALLQYTSIPYILMLRSWILYNLYEEIK
CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
DGEGKVRYKLLEKGKYHKIVEERLNFFKNRHPFWISKEEFDKVINIYIKTLEAHREKLIE
CCCCCEEHEEHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHH
LGYIYLSSKEEVVKYCIEPLRKQLEDILRKKLFIFTVPTDFIIEPQDLKNIQIEKDKYIV
HHEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCCCCCEEECCCCHH
HNYIGYRKDVLKEFKEFFDYFVKFHNLQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087