Definition Helicobacter pylori 26695, complete genome.
Accession NC_000915
Length 1,667,867

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Identifier: 15644663

GI number: 15644663

Start: 30071

End: 31852

Strand: Reverse

Name: Not Available

Synonym: HP0030

Alternate gene names: NA

Gene position: 31852-30071 (Counterclockwise)

Preceding gene: 15644678

Following gene: 15644662

Centisome position: 1.91

GC content: 36.7

Gene sequence:

>1782_bases
ATGCTATTGAATTACGATTTTTTAGAATTTGTTGATGAGCCGAAAAGAAACACTTCTTTGACAGCATCTATTGATAAAGC
GTTAGCGGACAGGAAGTTAGCTAGACAAAATAAACCTAGCGTTAGGGTGCTTGGTAAGGCGATGCCCTTAAGCAAGTTTT
TAGATGCTGTTGGCGATGAAATCTCACGACTTAAATATGATATGAGCCACAAGACTATTAAAGGCTCTACAATTGAGAGT
TCTAATCTTATCAGCATTTATAAAAAGATTGCGAGCGGACTACCTTTTGGGACTATCTCGGCGTTTAGACCTTTTAAAGA
CGCTTTTTATAAAGACTTTACCGAAAAAGAACAAAACGCTCTAATCTATGCTTATAAGAGCGGAGCAGACCCTAAAAATG
CGGACATAATAGCCAAATATTGGTTAAGTCAATCTGTGGATTTAGACCCATACGACCCTATTAAAGTTGTAGATTTCTTT
CACCCACAACCTGAAAATGGTAAAGAGACTACAAAATTTAAGAACTACAAAGATAGGATTGAGAACATTTATGCGACACT
CTATAACACATTGGGTAGGGGTTATGTGGATAAATTTTTTAAAAAAGAAGCCACAATGAGGGACTTTATGTCTAGCGATA
AATTTGTTGAGAGATACCGCTACACTAGAAAAGAAAATATGGCAAGGACACAAGCATTAAAAGACATAATGAATATTGAC
AGAGATTTCATTGGTTATATTGAAGTGTTAGGGTATTGGAAAGACAACCCTAAAGACAATATCTTACCAGACAAAGAGGT
TAGCTTTTTTGTATTCCAAAACGAACCTAGTAGCACATTTGATTTGAAAAACCACTTATTGATATGGGGTAAACAATTCA
GACAAGTAGCGATTTGCTATGGCGGACAATTGATTGCTAATAAGAATAAGACTTATAGGATAGATTTGATAAGTTGCAGA
CCTGATAATTTTGGTGAGGTTTGGGCTAAATTCACAGGGATTAAATTTTCAGTTCCTAGCGACTTACCACAAGCTCTCAC
ACGCATAAATGACAGCGTTTATACTTTTCTCTCTAGGAATAAAGAGGGTATCGGTCTTAATAAACTCGCTCTCAATAAAG
TCGTTAAGACAGAATTAAAAGCGACTTGTATGCCCTATGATTACTCTAAATTGGGTATAGAGACTATTGGCGAGGACATT
AGAAGCAATATTAAAGCATTACAGAAAATGTCTCGTGGGTATGGACACCCTAAAGAGTTCTTTTTGGACGCAATGATAAA
AAAACAGGAAAATGCGATTAAACGCATAGAAGCACGAAAATGTGCGGTAAGCGATGACTTCAAACAAGGTATGAAACGAA
ACATTAAAGTTAATAACCTTGTTAAAGCTATGCGACAAGGCAAAAAAGTGAGTAGGACATTGATTGCTAAAGTGCTTGCT
AACACCATAGACACCGATGCGGGTTATTGCTTCATTTCGCCGACAGATTTAGCGACACAACTTGGCAACATCAGCCCTAG
ACTATCTAAAAGCATAGTTACCGCCATAGAGCAAGCAGAGGGCGTGAGACTGAATTATGCGTTGATTGACAAAATCACCT
ATAACTCACTCCACAATATCTTAAGTTTCATTTTTGATATTGATAACCCTTTAAGCGACCAAGTGTTTGAGAGATTAGTC
ATTGAAGTCCCAAGAGAAGCACTTAAAAATGTGAAGTTGCCACAAATCAAAAATGTATTGACTTCTCAAATCTTTGATGG
CGCTTACCACTTTAAAAGTTAA

Upstream 100 bases:

>100_bases
ACCTTAAATGAAGTTTTGGTATTATACCAAATAAACCCTAATGACCCGCTGAAAGCTCAAAGATAAAGCGCTACAATCTC
GCTTAGAAAAAGGACACAAA

Downstream 100 bases:

>100_bases
ACCATGCTCTTTATCAGCGCAACTAACACGAATGCCGGAAAAACCACATGCGCTAGGCTATTAGCCCAGTATTGCAACGC
TTGTGGCGTTAAAACTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGDEISRLKYDMSHKTIKGSTIES
SNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQNALIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFF
HPQPENGKETTKFKNYKDRIENIYATLYNTLGRGYVDKFFKKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMNID
RDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVAICYGGQLIANKNKTYRIDLISCR
PDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRNKEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDI
RSNIKALQKMSRGYGHPKEFFLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAKVLA
NTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSLHNILSFIFDIDNPLSDQVFERLV
IEVPREALKNVKLPQIKNVLTSQIFDGAYHFKS

Sequences:

>Translated_593_residues
MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGDEISRLKYDMSHKTIKGSTIES
SNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQNALIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFF
HPQPENGKETTKFKNYKDRIENIYATLYNTLGRGYVDKFFKKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMNID
RDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVAICYGGQLIANKNKTYRIDLISCR
PDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRNKEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDI
RSNIKALQKMSRGYGHPKEFFLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAKVLA
NTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSLHNILSFIFDIDNPLSDQVFERLV
IEVPREALKNVKLPQIKNVLTSQIFDGAYHFKS
>Mature_593_residues
MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGDEISRLKYDMSHKTIKGSTIES
SNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQNALIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFF
HPQPENGKETTKFKNYKDRIENIYATLYNTLGRGYVDKFFKKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMNID
RDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVAICYGGQLIANKNKTYRIDLISCR
PDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRNKEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDI
RSNIKALQKMSRGYGHPKEFFLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAKVLA
NTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSLHNILSFIFDIDNPLSDQVFERLV
IEVPREALKNVKLPQIKNVLTSQIFDGAYHFKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67898; Mature: 67898

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGDE
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHH
ISRLKYDMSHKTIKGSTIESSNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQNA
HHHHHHHHCCCEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCE
LIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFFHPQPENGKETTKFKNYKDRI
EEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH
ENIYATLYNTLGRGYVDKFFKKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMNID
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVAICY
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHCCCCEEEECHHHHEEHHHC
GGQLIANKNKTYRIDLISCRPDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRN
CCEEEECCCCEEEEEEEEECCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCC
KEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDIRSNIKALQKMSRGYGHPKEF
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
FLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAKVLA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHH
NTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSLHNI
HHCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
LSFIFDIDNPLSDQVFERLVIEVPREALKNVKLPQIKNVLTSQIFDGAYHFKS
HHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGDE
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHH
ISRLKYDMSHKTIKGSTIESSNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQNA
HHHHHHHHCCCEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCE
LIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFFHPQPENGKETTKFKNYKDRI
EEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH
ENIYATLYNTLGRGYVDKFFKKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMNID
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVAICY
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCHHCCCCEEEECHHHHEEHHHC
GGQLIANKNKTYRIDLISCRPDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRN
CCEEEECCCCEEEEEEEEECCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCC
KEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDIRSNIKALQKMSRGYGHPKEF
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
FLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAKVLA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHH
NTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSLHNI
HHCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
LSFIFDIDNPLSDQVFERLVIEVPREALKNVKLPQIKNVLTSQIFDGAYHFKS
HHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA