Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154248341

Identifier: 154248341

GI number: 154248341

Start: 4903111

End: 4904736

Strand: Reverse

Name: 154248341

Synonym: Xaut_4421

Alternate gene names: NA

Gene position: 4904736-4903111 (Counterclockwise)

Preceding gene: 154248346

Following gene: 154248339

Centisome position: 92.39

GC content: 68.45

Gene sequence:

>1626_bases
ATGCCTTCCTCCGTGCGGCTGCCCGTGGTGCTCGCGCTCGTGGTGGCCGGCCTCATCGCCGGCCTTTGGACCCTTCTCGG
ACGGCCCGTGGCCATGCCACCCTCGCCGTTGGCACAGGGCGAGAAGCTGCCGTGCGTGTCCTATGCTCCGTTCCGCGACG
GCCAGTCGCCGTTCCAGAAGGGGTTGGTGATATCGGAAGCCCAGATCGACGAGGATTTTGCCCGCCTCGCCAAGATCACC
TCCTGCGTGCGCACCTATTCCATCGAGATGGGGCTGGACAAGGCGCCGGCCATCGCCCGCAAGCACGGCCTCACCATGCT
GCTCGGCATCTGGCTGGGGCCGGACGTGGACCGCAACCGCGTCGAGCTCGACACCGGCATCCGCCTTGCCCAGGAAAATC
AGGACGTGGTTAAGGCCGTGGTGGTGGGCAACGAGGTGCTGCTGCGCGGCGAGATGTCCGCCACCGAGTTGGCCAGTACC
ATCGCCAGCGTGAAGCGGCAGGTGGCCCCGGTTCCGGTCACCTATGCCGACGTGTGGGAATTCTGGGAGCGCAACAAGGG
TCTGACCGAGAACGTGGATTTCGTCACCATCCACATCCTGCCCTATTGGGAGGACCTGCCGGTATCCGCTTCCGAGGCCG
GCCCCCATGTGGACGAGATCCGCCAGCGCATGGCTGAGGCCTTCCCCGGCAAGGAAATCCTGATCGGCGAGACCGGATGG
CCGAGCGCCGGCCGCATGCGCGAGGAGGCGCTGCCCTCGCCCTCCAACCAGGCGCGGGTGATGCACGACGTGGTGGCGCT
GGCCAAGCGCCAGGGCTATCGGGTCAACGTCATCGAGGCGTTCGACCAACCGTGGAAGCGCCGCAGCGAGGGCACCGTCG
GCGGGCACTGGGGCATTATCGATGCCGATGCCCGCATGCCGAAATTCGCCTGGGGACAACCGGTGGAGGACTACCCCGGC
TGGCGCATGCACATCGGCGTGGGCCTGGTGGTGGTGGCCGGCGTGTTTGCCAGCGCCTTCGCCGGCGGCCGCAAGCGTGA
GGACGGGCTGCAGACGCGGGACTGGTTGGCCGTGGCAGGGATTGCGCTGTTCGGCGGCGCGACGCTTGGCGCCGCTCTTT
CCGCCATGCCGCTGGAGAGCCTCGGCTTCTTCGGCTGGCTGAGGAATGGCCTGCTGTTTGCCGTGGCGGTCGCGAGCCTG
ATCGTGATGCCGGCGGTGATCGGGCGGGGGCAGGGGCTGGCACCGTTCTCGGTGGCGCTGGATGCTCGCCGCTGGGCGGT
GTCTTCGGGCGCGGCCATTGCCGCCGCTTTGATGCTGGCGCTCGCCGCTGTGGCCGTCGGGTCGGTGGCGTTCGAGCTGG
TATTCGACCCGCGCTACAAGGATTTCCCGGTGTTTCCGCTCACCGCCATCGTGGCGGCGGTCGCCGCGCCCATGCTGGTG
CGCCGGGCGGAGCGGGACGGGGCGGGCCTCGGCGAGGTCATCGCCACCTGGGGCCTGCTGGTGGCCGGCGTCTACGTGCC
CCTGAACGAGACGCTCTCCAACTGGCAGGCGGCCTGGTTCGGCACGCTCTGCCTCATTCTTTCCTTCACGCTGTGGCGGG
TCCAGGCCGTGCAAAGGAAAGGATGA

Upstream 100 bases:

>100_bases
GGGGGTGCCGCAACGATGCCCGCGGCTGCGGGAAGGCTTCACACCGCCGGTGCAAGGCTCTATGTGGCGGCGGGGCCCTC
TCGTCTCGTCTGGAGTTTCG

Downstream 100 bases:

>100_bases
GCATCATCGCCGCCAGCGCGCCGGCCACCTCGTTGTGGAACACCAGCGCGAAGGCGGTGAACACCATCCCCACCGAGAAG
GTGGCAAGGCCCGGCGCGAT

Product: putative beta (1-6) glucans synthase

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycoside Hydrolase Family Protein; Beta Glucan Synthase; Glycosyl Hydrolase; Beta-(1-3)-Glucosyl Transferase; Glycosyltransferase; Exo-Beta-1 3-Glucanase-Like Protein; Family 2 Glycosyl Transferase; Glycoside Hydrolase; Glucan 1 3-Beta-Glucosidase; Glycosyl Transferase Group 2 Family Protein; Beta-(1-3)-Glucosyl Transferase NdvB-Like; Exo-Beta-1 3-Glucanase-Like; Glycosyl Transferase Family 2 Protein; Glycoside Hydrolase Family; Beta Glucans Synthase NdvC-Like; Glucans Synthase; Exo-Beta-1 3-Glucanase; Glycosyl Hydrolases Family; Glucosyl Transferase; Cellulose Synthase Catalytic Subunit

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MPSSVRLPVVLALVVAGLIAGLWTLLGRPVAMPPSPLAQGEKLPCVSYAPFRDGQSPFQKGLVISEAQIDEDFARLAKIT
SCVRTYSIEMGLDKAPAIARKHGLTMLLGIWLGPDVDRNRVELDTGIRLAQENQDVVKAVVVGNEVLLRGEMSATELAST
IASVKRQVAPVPVTYADVWEFWERNKGLTENVDFVTIHILPYWEDLPVSASEAGPHVDEIRQRMAEAFPGKEILIGETGW
PSAGRMREEALPSPSNQARVMHDVVALAKRQGYRVNVIEAFDQPWKRRSEGTVGGHWGIIDADARMPKFAWGQPVEDYPG
WRMHIGVGLVVVAGVFASAFAGGRKREDGLQTRDWLAVAGIALFGGATLGAALSAMPLESLGFFGWLRNGLLFAVAVASL
IVMPAVIGRGQGLAPFSVALDARRWAVSSGAAIAAALMLALAAVAVGSVAFELVFDPRYKDFPVFPLTAIVAAVAAPMLV
RRAERDGAGLGEVIATWGLLVAGVYVPLNETLSNWQAAWFGTLCLILSFTLWRVQAVQRKG

Sequences:

>Translated_541_residues
MPSSVRLPVVLALVVAGLIAGLWTLLGRPVAMPPSPLAQGEKLPCVSYAPFRDGQSPFQKGLVISEAQIDEDFARLAKIT
SCVRTYSIEMGLDKAPAIARKHGLTMLLGIWLGPDVDRNRVELDTGIRLAQENQDVVKAVVVGNEVLLRGEMSATELAST
IASVKRQVAPVPVTYADVWEFWERNKGLTENVDFVTIHILPYWEDLPVSASEAGPHVDEIRQRMAEAFPGKEILIGETGW
PSAGRMREEALPSPSNQARVMHDVVALAKRQGYRVNVIEAFDQPWKRRSEGTVGGHWGIIDADARMPKFAWGQPVEDYPG
WRMHIGVGLVVVAGVFASAFAGGRKREDGLQTRDWLAVAGIALFGGATLGAALSAMPLESLGFFGWLRNGLLFAVAVASL
IVMPAVIGRGQGLAPFSVALDARRWAVSSGAAIAAALMLALAAVAVGSVAFELVFDPRYKDFPVFPLTAIVAAVAAPMLV
RRAERDGAGLGEVIATWGLLVAGVYVPLNETLSNWQAAWFGTLCLILSFTLWRVQAVQRKG
>Mature_540_residues
PSSVRLPVVLALVVAGLIAGLWTLLGRPVAMPPSPLAQGEKLPCVSYAPFRDGQSPFQKGLVISEAQIDEDFARLAKITS
CVRTYSIEMGLDKAPAIARKHGLTMLLGIWLGPDVDRNRVELDTGIRLAQENQDVVKAVVVGNEVLLRGEMSATELASTI
ASVKRQVAPVPVTYADVWEFWERNKGLTENVDFVTIHILPYWEDLPVSASEAGPHVDEIRQRMAEAFPGKEILIGETGWP
SAGRMREEALPSPSNQARVMHDVVALAKRQGYRVNVIEAFDQPWKRRSEGTVGGHWGIIDADARMPKFAWGQPVEDYPGW
RMHIGVGLVVVAGVFASAFAGGRKREDGLQTRDWLAVAGIALFGGATLGAALSAMPLESLGFFGWLRNGLLFAVAVASLI
VMPAVIGRGQGLAPFSVALDARRWAVSSGAAIAAALMLALAAVAVGSVAFELVFDPRYKDFPVFPLTAIVAAVAAPMLVR
RAERDGAGLGEVIATWGLLVAGVYVPLNETLSNWQAAWFGTLCLILSFTLWRVQAVQRKG

Specific function: Unknown

COG id: COG5309

COG function: function code G; Exo-beta-1,3-glucanase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6323964, Length=266, Percent_Identity=27.0676691729323, Blast_Score=87, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6321721, Length=264, Percent_Identity=25.7575757575758, Blast_Score=83, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6321410, Length=266, Percent_Identity=24.0601503759398, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58298; Mature: 58167

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS00587 GLYCOSYL_HYDROL_F17

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSVRLPVVLALVVAGLIAGLWTLLGRPVAMPPSPLAQGEKLPCVSYAPFRDGQSPFQK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHC
GLVISEAQIDEDFARLAKITSCVRTYSIEMGLDKAPAIARKHGLTMLLGIWLGPDVDRNR
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEHHHCCCCCCCCE
VELDTGIRLAQENQDVVKAVVVGNEVLLRGEMSATELASTIASVKRQVAPVPVTYADVWE
EECCCCCEECCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
FWERNKGLTENVDFVTIHILPYWEDLPVSASEAGPHVDEIRQRMAEAFPGKEILIGETGW
HHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC
PSAGRMREEALPSPSNQARVMHDVVALAKRQGYRVNVIEAFDQPWKRRSEGTVGGHWGII
CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHCCCCCCCCCCCEE
DADARMPKFAWGQPVEDYPGWRMHIGVGLVVVAGVFASAFAGGRKREDGLQTRDWLAVAG
ECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
IALFGGATLGAALSAMPLESLGFFGWLRNGLLFAVAVASLIVMPAVIGRGQGLAPFSVAL
HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
DARRWAVSSGAAIAAALMLALAAVAVGSVAFELVFDPRYKDFPVFPLTAIVAAVAAPMLV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
RRAERDGAGLGEVIATWGLLVAGVYVPLNETLSNWQAAWFGTLCLILSFTLWRVQAVQRK
HHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
G
C
>Mature Secondary Structure 
PSSVRLPVVLALVVAGLIAGLWTLLGRPVAMPPSPLAQGEKLPCVSYAPFRDGQSPFQK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHC
GLVISEAQIDEDFARLAKITSCVRTYSIEMGLDKAPAIARKHGLTMLLGIWLGPDVDRNR
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEHHHCCCCCCCCE
VELDTGIRLAQENQDVVKAVVVGNEVLLRGEMSATELASTIASVKRQVAPVPVTYADVWE
EECCCCCEECCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
FWERNKGLTENVDFVTIHILPYWEDLPVSASEAGPHVDEIRQRMAEAFPGKEILIGETGW
HHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCC
PSAGRMREEALPSPSNQARVMHDVVALAKRQGYRVNVIEAFDQPWKRRSEGTVGGHWGII
CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHCCHHHHCCCCCCCCCCCEE
DADARMPKFAWGQPVEDYPGWRMHIGVGLVVVAGVFASAFAGGRKREDGLQTRDWLAVAG
ECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
IALFGGATLGAALSAMPLESLGFFGWLRNGLLFAVAVASLIVMPAVIGRGQGLAPFSVAL
HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
DARRWAVSSGAAIAAALMLALAAVAVGSVAFELVFDPRYKDFPVFPLTAIVAAVAAPMLV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
RRAERDGAGLGEVIATWGLLVAGVYVPLNETLSNWQAAWFGTLCLILSFTLWRVQAVQRK
HHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA