| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is ilvA [H]
Identifier: 154248214
GI number: 154248214
Start: 4761170
End: 4762447
Strand: Reverse
Name: ilvA [H]
Synonym: Xaut_4294
Alternate gene names: 154248214
Gene position: 4762447-4761170 (Counterclockwise)
Preceding gene: 154248215
Following gene: 154248213
Centisome position: 89.71
GC content: 71.28
Gene sequence:
>1278_bases ATGACAGCCCCCGCCGTCGCCTCCAGCGACCGCCCCCTCGACCTCAACGTCGACCTGCCCGTCACCCTCGCGGACGTGGA GGCGGCGCGGGCGCTGGTGAGCGGCGCGGTATTGCACACGCCCACCCTGCACGCCCCGCGCCTGTCCGCCCTCACCGGTG CGGATGTGTACGTGAAGTATGAGAATCTCCAGGTCACCGCCTCGTTCAAGGAGCGCGGCGCGCTGGTGAAGCTGGCGCGC CTCACCCCCGAGGAGGCGCGGCGGGGCGTGGTGGCCATGTCGGCGGGCAACCATGCCCAGGCGGTGGCCTATCACGGTAC GCGGCTGAAGATTTCCACCCTCATCGTCATGCCGGAGACCACCCCCCAGGTGAAGGTGGCCGCCACTGAAGCCTTCGGCG CCGAGGTGGTGCTGTTCGGCGATACGGTCGCCGACGCCTTCGAGGAGGCAACGCGCATCTCCAAGGCGCAAGGGCGCATC TTCGTCCACCCCTATGACGACGTGGACGTGATCGCCGGCCAGGGCTCGCTGGCGCTGGAGATGATGGAGGACGGGCCGGC CTTCGACGCCGTGGTGGTGCCCATCGGCGGAGGCGGGCTGATCGCCGGCATGGCGCTGGCCTTCGCCGGGCGCTCGCCGG CGACGCAGGTGGTGGGGGTCGAGACCCAGCTCTATCCCGCCATGTGGTCCGCCATGACCGGAGAGGCGCGCCCCTGCGGC GGGCCGACGCTGGCGGAGGGCATCGCGGTGCGCGACGTGGGTGTCATCACCTCGCAGATCGTGCGGCGCCTGGTACCCCA CGTGGTGCTGGTGGACGAGACCGCGCTGGAGCGGGCGGTGAACGCCTTCCTCATGCACCAGAAGACCTTGGCCGAAGGCG CCGGCGCCGCCGGCCTTGCCGCGCTCCTCGCCGAACCCGAGCGCTTCCGCGGCAAGACGGTGGGGCTGGTGGTCTCCGGC GGCAACATCGATCCGCGCATGATTGCCGGCATCCTGCTGCGCGAGCTGGAGCGGGAGGAGCGCATCGTCTCCTTCCGCCT CACCATCCTCGACCGGCCTGGCATGCTGGGGCGCATCGCCACGCTGCTCGGCAAGCTCGGGGCCAACATCCTGGAGGTGC ACCACCGGCGCACCTTCCTCGACGTGCCGGCCAAGGGCACGCGGCTCGACCTCACCGTGGAGACCCGGGACCAGGCCCAT GCCGAGCTGATCCAGAAGGCGCTGGAGGGCGAGGGCCTGCCGGTCCAGCGCCTGGGCGCCGGAGGCGCCGATTGGTGA
Upstream 100 bases:
>100_bases GCTTCACGCTCCAGCTTTTCGAGCTTGCGCATTTTCGTCACGCGGACCGGAGTCCCCCTCGCTTGAAAATGCTCAAAGCG CCCGCGCCGGGAGAGACAAG
Downstream 100 bases:
>100_bases AGTGCGCCGGCGGCGCGGACTGGTGATGCCGTGATCTTGCGCTGCAGGGAGGCCTTCACCACCTGAAGGTGTCGGAAGGA GTCTTCAACCCATGAGCAAC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTAPAVASSDRPLDLNVDLPVTLADVEAARALVSGAVLHTPTLHAPRLSALTGADVYVKYENLQVTASFKERGALVKLAR LTPEEARRGVVAMSAGNHAQAVAYHGTRLKISTLIVMPETTPQVKVAATEAFGAEVVLFGDTVADAFEEATRISKAQGRI FVHPYDDVDVIAGQGSLALEMMEDGPAFDAVVVPIGGGGLIAGMALAFAGRSPATQVVGVETQLYPAMWSAMTGEARPCG GPTLAEGIAVRDVGVITSQIVRRLVPHVVLVDETALERAVNAFLMHQKTLAEGAGAAGLAALLAEPERFRGKTVGLVVSG GNIDPRMIAGILLRELEREERIVSFRLTILDRPGMLGRIATLLGKLGANILEVHHRRTFLDVPAKGTRLDLTVETRDQAH AELIQKALEGEGLPVQRLGAGGADW
Sequences:
>Translated_425_residues MTAPAVASSDRPLDLNVDLPVTLADVEAARALVSGAVLHTPTLHAPRLSALTGADVYVKYENLQVTASFKERGALVKLAR LTPEEARRGVVAMSAGNHAQAVAYHGTRLKISTLIVMPETTPQVKVAATEAFGAEVVLFGDTVADAFEEATRISKAQGRI FVHPYDDVDVIAGQGSLALEMMEDGPAFDAVVVPIGGGGLIAGMALAFAGRSPATQVVGVETQLYPAMWSAMTGEARPCG GPTLAEGIAVRDVGVITSQIVRRLVPHVVLVDETALERAVNAFLMHQKTLAEGAGAAGLAALLAEPERFRGKTVGLVVSG GNIDPRMIAGILLRELEREERIVSFRLTILDRPGMLGRIATLLGKLGANILEVHHRRTFLDVPAKGTRLDLTVETRDQAH AELIQKALEGEGLPVQRLGAGGADW >Mature_424_residues TAPAVASSDRPLDLNVDLPVTLADVEAARALVSGAVLHTPTLHAPRLSALTGADVYVKYENLQVTASFKERGALVKLARL TPEEARRGVVAMSAGNHAQAVAYHGTRLKISTLIVMPETTPQVKVAATEAFGAEVVLFGDTVADAFEEATRISKAQGRIF VHPYDDVDVIAGQGSLALEMMEDGPAFDAVVVPIGGGGLIAGMALAFAGRSPATQVVGVETQLYPAMWSAMTGEARPCGG PTLAEGIAVRDVGVITSQIVRRLVPHVVLVDETALERAVNAFLMHQKTLAEGAGAAGLAALLAEPERFRGKTVGLVVSGG NIDPRMIAGILLRELEREERIVSFRLTILDRPGMLGRIATLLGKLGANILEVHHRRTFLDVPAKGTRLDLTVETRDQAHA ELIQKALEGEGLPVQRLGAGGADW
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=315, Percent_Identity=34.6031746031746, Blast_Score=164, Evalue=1e-40, Organism=Escherichia coli, GI1789505, Length=325, Percent_Identity=41.5384615384615, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI1790207, Length=378, Percent_Identity=33.8624338624339, Blast_Score=155, Evalue=5e-39, Organism=Caenorhabditis elegans, GI71991565, Length=421, Percent_Identity=34.4418052256532, Blast_Score=218, Evalue=5e-57, Organism=Caenorhabditis elegans, GI17537387, Length=394, Percent_Identity=32.994923857868, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI17508781, Length=285, Percent_Identity=28.7719298245614, Blast_Score=106, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6322631, Length=313, Percent_Identity=35.1437699680511, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6320930, Length=393, Percent_Identity=29.2620865139949, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6319788, Length=190, Percent_Identity=31.0526315789474, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI21355833, Length=394, Percent_Identity=37.8172588832487, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI24645328, Length=298, Percent_Identity=35.5704697986577, Blast_Score=117, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR001721 - InterPro: IPR011820 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 44858; Mature: 44727
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPAVASSDRPLDLNVDLPVTLADVEAARALVSGAVLHTPTLHAPRLSALTGADVYVKY CCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHCCEEECCCCCCCCCHHCCCCEEEEEE ENLQVTASFKERGALVKLARLTPEEARRGVVAMSAGNHAQAVAYHGTRLKISTLIVMPET ECEEEEEEHHHCCCEEEEECCCHHHHHCCEEEEECCCCEEEEEECCCEEEEEEEEEECCC TPQVKVAATEAFGAEVVLFGDTVADAFEEATRISKAQGRIFVHPYDDVDVIAGQGSLALE CCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCEEEE MMEDGPAFDAVVVPIGGGGLIAGMALAFAGRSPATQVVGVETQLYPAMWSAMTGEARPCG EECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCC GPTLAEGIAVRDVGVITSQIVRRLVPHVVLVDETALERAVNAFLMHQKTLAEGAGAAGLA CCHHHCCEEEEHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHH ALLAEPERFRGKTVGLVVSGGNIDPRMIAGILLRELEREERIVSFRLTILDRPGMLGRIA HHHCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHH TLLGKLGANILEVHHRRTFLDVPAKGTRLDLTVETRDQAHAELIQKALEGEGLPVQRLGA HHHHHHCCHHHHHHHCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHCCC GGADW CCCCC >Mature Secondary Structure TAPAVASSDRPLDLNVDLPVTLADVEAARALVSGAVLHTPTLHAPRLSALTGADVYVKY CCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHCCEEECCCCCCCCCHHCCCCEEEEEE ENLQVTASFKERGALVKLARLTPEEARRGVVAMSAGNHAQAVAYHGTRLKISTLIVMPET ECEEEEEEHHHCCCEEEEECCCHHHHHCCEEEEECCCCEEEEEECCCEEEEEEEEEECCC TPQVKVAATEAFGAEVVLFGDTVADAFEEATRISKAQGRIFVHPYDDVDVIAGQGSLALE CCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCEEEE MMEDGPAFDAVVVPIGGGGLIAGMALAFAGRSPATQVVGVETQLYPAMWSAMTGEARPCG EECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCC GPTLAEGIAVRDVGVITSQIVRRLVPHVVLVDETALERAVNAFLMHQKTLAEGAGAAGLA CCHHHCCEEEEHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHH ALLAEPERFRGKTVGLVVSGGNIDPRMIAGILLRELEREERIVSFRLTILDRPGMLGRIA HHHCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHH TLLGKLGANILEVHHRRTFLDVPAKGTRLDLTVETRDQAHAELIQKALEGEGLPVQRLGA HHHHHHCCHHHHHHHCCEEEECCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHCCC GGADW CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA