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The map label for this gene is 154248213

Identifier: 154248213

GI number: 154248213

Start: 4760533

End: 4761078

Strand: Reverse

Name: 154248213

Synonym: Xaut_4293

Alternate gene names: NA

Gene position: 4761078-4760533 (Counterclockwise)

Preceding gene: 154248214

Following gene: 154248212

Centisome position: 89.68

GC content: 64.47

Gene sequence:

>546_bases
ATGAGCAACACCAGCGACACGTCCCGCCAGCCGCCCCCCTACGGCTATCCGGACGGTGCGCGTCCCCATGCCTTTGATCC
GGTGGCGCAGCCGGAGTTCTTCGAGGGCGTGCTCTCCCGCCGGCTCATGGCCTTTATGGTGGATGCCATGATCGTCGTGG
GCGCGGTGGTGCTCTTCTATTTGTTCGTCCTGGTGATGGGGCTGGTGACGTTCGGCCTGAGCTGGATCGCCTTCTTCTTC
ATCTGGCCCACCTTCGTGATCGTGGCGCTGGCCTACAACGCGCTCACTCTCGGCTCCCCAGCCTCGGCGACGCTCGGCAT
GCGACTCATGGATATCGAGGTGCGCACATGGTACGGCGCGCCCTGCTATAGCGTGCTCGGCGCGGTGCATGCGGTGTGCT
TCTGGGTGTCGGTTTCCATCTTCACTCCGTTCGTGCTGCTGGTCGCCCTGTTCAACGACCGGCGCCGGCTGCTGCACGAT
TTCCTTGTGGGCACGGTGGTGGTGAACAACGCCATCCGCGCGGACGCCTTGCGGTACAGGCGCTGA

Upstream 100 bases:

>100_bases
GATTGGTGAAGTGCGCCGGCGGCGCGGACTGGTGATGCCGTGATCTTGCGCTGCAGGGAGGCCTTCACCACCTGAAGGTG
TCGGAAGGAGTCTTCAACCC

Downstream 100 bases:

>100_bases
ATTTTGGCCACAGGGGCACCTTCGCCTTTGACCTCGTCCCACACAGCGGCGATGCTGTGTGTTCTTGAGGCAAGGACGTC
GTGAGCGAGCATCCGCGCGA

Product: RDD domain-containing protein

Products: NA

Alternate protein names: RDD Domain Containing Protein; Transmembrane Protein; RDD Family Protein; RDD Family

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSNTSDTSRQPPPYGYPDGARPHAFDPVAQPEFFEGVLSRRLMAFMVDAMIVVGAVVLFYLFVLVMGLVTFGLSWIAFFF
IWPTFVIVALAYNALTLGSPASATLGMRLMDIEVRTWYGAPCYSVLGAVHAVCFWVSVSIFTPFVLLVALFNDRRRLLHD
FLVGTVVVNNAIRADALRYRR

Sequences:

>Translated_181_residues
MSNTSDTSRQPPPYGYPDGARPHAFDPVAQPEFFEGVLSRRLMAFMVDAMIVVGAVVLFYLFVLVMGLVTFGLSWIAFFF
IWPTFVIVALAYNALTLGSPASATLGMRLMDIEVRTWYGAPCYSVLGAVHAVCFWVSVSIFTPFVLLVALFNDRRRLLHD
FLVGTVVVNNAIRADALRYRR
>Mature_180_residues
SNTSDTSRQPPPYGYPDGARPHAFDPVAQPEFFEGVLSRRLMAFMVDAMIVVGAVVLFYLFVLVMGLVTFGLSWIAFFFI
WPTFVIVALAYNALTLGSPASATLGMRLMDIEVRTWYGAPCYSVLGAVHAVCFWVSVSIFTPFVLLVALFNDRRRLLHDF
LVGTVVVNNAIRADALRYRR

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20223; Mature: 20092

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTSDTSRQPPPYGYPDGARPHAFDPVAQPEFFEGVLSRRLMAFMVDAMIVVGAVVLFY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVLVMGLVTFGLSWIAFFFIWPTFVIVALAYNALTLGSPASATLGMRLMDIEVRTWYGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEHHHCCCC
PCYSVLGAVHAVCFWVSVSIFTPFVLLVALFNDRRRLLHDFLVGTVVVNNAIRADALRYR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
R
C
>Mature Secondary Structure 
SNTSDTSRQPPPYGYPDGARPHAFDPVAQPEFFEGVLSRRLMAFMVDAMIVVGAVVLFY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFVLVMGLVTFGLSWIAFFFIWPTFVIVALAYNALTLGSPASATLGMRLMDIEVRTWYGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEHHHCCCC
PCYSVLGAVHAVCFWVSVSIFTPFVLLVALFNDRRRLLHDFLVGTVVVNNAIRADALRYR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA