| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is paaJ [C]
Identifier: 154245331
GI number: 154245331
Start: 1588725
End: 1589912
Strand: Direct
Name: paaJ [C]
Synonym: Xaut_1384
Alternate gene names: 154245331
Gene position: 1588725-1589912 (Clockwise)
Preceding gene: 154245330
Following gene: 154245334
Centisome position: 29.93
GC content: 66.58
Gene sequence:
>1188_bases ATGCCTGCAGGAGATCTGGAGAACAAGGCCGCCATCGTGGGCTGGGCCCATTCGCCGTTCGGCAAGCTCGAGGATGCCGA CACCGAAGCGCTGATGGGCCGCGTGGCCGGCGCCGCTATCGAGCATGCGGGCCTTGCCCCCTCGGATGTGGATTCCATCC ATGTGGGCGTGTTCAACGCCGGCTTCCAGAAGCAGGATTTCCAGGGCGCCATGCCAGCCCTGAGCGTGCCGGAACTCGCC CACACCCCGGCGGTGCGGGTGGAGAATGCCTGCGCCACCGGATCGGCCGCCATCCATTCGGCGCTCAACTATATCGCCAG CGGTCAGGGCCGCATCGCCCTCGTGGTGGGGGCCGAGAAGATGACCGCCAAGCCCACCGCCGAGGTGGGTGACATCCTCC TCAACGCCTCCTACCGTAAGGAAGAAGCCGACATCGACGGCGGTTTTGCCGGCGTGTTCGGCCGCATCGCGCAGCATTAT TTCCAGCGCTACGGCGATCGCTCCGAGGAACTTGCGCGCATCGCCGCCAAGAACCACAAGAACGGCGTTTCCAATCCCTA CGCCCAGATGCGCAAGGATTTCGGCTTCGAGTTCTGCAACACCATTTCCGAGAAGAACCCCTATGTGGCCGGCCCCCTGC GCCGCACCGACTGCTCGCTGGTGTCGGACGGCGCCGCGGCCCTCGTGATCGCCTCGCCCGACGTGGCGCAGACGCTGCAG CGCGCCGTCGCCTTCCGCGCCCGTGCCCATGCCAACGACATCCTGCCGTTGTCGCGGCGCGATCCCATCGCCTTCGAGGG CGCCCGCCGCGCCTGGGTGAAGGCGCTGGAGCAGGGCGGCATCAGCCTCGACGACCTCGACCTGGTGGAGACCCACGACT GTTTCACCATCGCCGAACTGCTTGAATACGAGGCCATGGGCCTCGCCAAGCCCGGCGAGGGTTACAAGGTGGTGCGCGAG GGCATCACCGAGAAGACCGGCAAGCTGCCGGTGAACGCCTCGGGCGGGCTGAAGTCCAAGGGCCATCCCATCGGCGCCAC CGGCGTGTCCATGCATGTGCTCTGCGCCATGCAGCTCATGGGCGAGGCCGGCGACATGCAGATCGCCGACGCCAAGATGG CCGGCATCTTCAACATGGGCGGTGCCGCCGTGGCCAATTACGTCTCCGTGCTCGAACGGGTGAAGTGA
Upstream 100 bases:
>100_bases GATGCCGGATGGCTTTATCGCGGGCCTGTCATAAAGACGGCCGCGTCCCTATCTCAACCAAGACCAACACAACGCGGCGT CACGCCGCCGGGAGAACGAC
Downstream 100 bases:
>100_bases GGGCAGGGGGGCCCCAGGCCCCCTTTCCCCCTCTTGGCCCCCTTTCCCGCTGGGGACGGCTTCGGCCGTTTCAAGCACCG GCCGTCGCGAGACTTATTCG
Product: acetyl-CoA acetyltransferase
Products: CoA; 3-oxoacyl-CoA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MPAGDLENKAAIVGWAHSPFGKLEDADTEALMGRVAGAAIEHAGLAPSDVDSIHVGVFNAGFQKQDFQGAMPALSVPELA HTPAVRVENACATGSAAIHSALNYIASGQGRIALVVGAEKMTAKPTAEVGDILLNASYRKEEADIDGGFAGVFGRIAQHY FQRYGDRSEELARIAAKNHKNGVSNPYAQMRKDFGFEFCNTISEKNPYVAGPLRRTDCSLVSDGAAALVIASPDVAQTLQ RAVAFRARAHANDILPLSRRDPIAFEGARRAWVKALEQGGISLDDLDLVETHDCFTIAELLEYEAMGLAKPGEGYKVVRE GITEKTGKLPVNASGGLKSKGHPIGATGVSMHVLCAMQLMGEAGDMQIADAKMAGIFNMGGAAVANYVSVLERVK
Sequences:
>Translated_395_residues MPAGDLENKAAIVGWAHSPFGKLEDADTEALMGRVAGAAIEHAGLAPSDVDSIHVGVFNAGFQKQDFQGAMPALSVPELA HTPAVRVENACATGSAAIHSALNYIASGQGRIALVVGAEKMTAKPTAEVGDILLNASYRKEEADIDGGFAGVFGRIAQHY FQRYGDRSEELARIAAKNHKNGVSNPYAQMRKDFGFEFCNTISEKNPYVAGPLRRTDCSLVSDGAAALVIASPDVAQTLQ RAVAFRARAHANDILPLSRRDPIAFEGARRAWVKALEQGGISLDDLDLVETHDCFTIAELLEYEAMGLAKPGEGYKVVRE GITEKTGKLPVNASGGLKSKGHPIGATGVSMHVLCAMQLMGEAGDMQIADAKMAGIFNMGGAAVANYVSVLERVK >Mature_394_residues PAGDLENKAAIVGWAHSPFGKLEDADTEALMGRVAGAAIEHAGLAPSDVDSIHVGVFNAGFQKQDFQGAMPALSVPELAH TPAVRVENACATGSAAIHSALNYIASGQGRIALVVGAEKMTAKPTAEVGDILLNASYRKEEADIDGGFAGVFGRIAQHYF QRYGDRSEELARIAAKNHKNGVSNPYAQMRKDFGFEFCNTISEKNPYVAGPLRRTDCSLVSDGAAALVIASPDVAQTLQR AVAFRARAHANDILPLSRRDPIAFEGARRAWVKALEQGGISLDDLDLVETHDCFTIAELLEYEAMGLAKPGEGYKVVREG ITEKTGKLPVNASGGLKSKGHPIGATGVSMHVLCAMQLMGEAGDMQIADAKMAGIFNMGGAAVANYVSVLERVK
Specific function: Thiolytic Cleavage Of Beta-Ketoadipyl-CoA To Succinate And Acetyl-CoA (By Similarity). [C]
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI302344767, Length=322, Percent_Identity=36.0248447204969, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI302344760, Length=322, Percent_Identity=36.0248447204969, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI19923233, Length=322, Percent_Identity=36.0248447204969, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI302344762, Length=351, Percent_Identity=33.6182336182336, Blast_Score=139, Evalue=6e-33, Organism=Homo sapiens, GI55956775, Length=314, Percent_Identity=32.1656050955414, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17537653, Length=394, Percent_Identity=30.2030456852792, Blast_Score=146, Evalue=1e-35, Organism=Drosophila melanogaster, GI19921506, Length=317, Percent_Identity=32.807570977918, Blast_Score=148, Evalue=6e-36, Organism=Drosophila melanogaster, GI24585051, Length=317, Percent_Identity=32.807570977918, Blast_Score=147, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: 2.3.1.16
Molecular weight: Translated: 41748; Mature: 41617
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGDLENKAAIVGWAHSPFGKLEDADTEALMGRVAGAAIEHAGLAPSDVDSIHVGVFNA CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC GFQKQDFQGAMPALSVPELAHTPAVRVENACATGSAAIHSALNYIASGQGRIALVVGAEK CCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHH MTAKPTAEVGDILLNASYRKEEADIDGGFAGVFGRIAQHYFQRYGDRSEELARIAAKNHK HCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC NGVSNPYAQMRKDFGFEFCNTISEKNPYVAGPLRRTDCSLVSDGAAALVIASPDVAQTLQ CCCCCHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCHHCCCCCEEEEEECCHHHHHHH RAVAFRARAHANDILPLSRRDPIAFEGARRAWVKALEQGGISLDDLDLVETHDCFTIAEL HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHH LEYEAMGLAKPGEGYKVVREGITEKTGKLPVNASGGLKSKGHPIGATGVSMHVLCAMQLM HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GEAGDMQIADAKMAGIFNMGGAAVANYVSVLERVK CCCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PAGDLENKAAIVGWAHSPFGKLEDADTEALMGRVAGAAIEHAGLAPSDVDSIHVGVFNA CCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC GFQKQDFQGAMPALSVPELAHTPAVRVENACATGSAAIHSALNYIASGQGRIALVVGAEK CCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHH MTAKPTAEVGDILLNASYRKEEADIDGGFAGVFGRIAQHYFQRYGDRSEELARIAAKNHK HCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC NGVSNPYAQMRKDFGFEFCNTISEKNPYVAGPLRRTDCSLVSDGAAALVIASPDVAQTLQ CCCCCHHHHHHHHCCHHHHHHHHCCCCEEECCCCCCCCHHCCCCCEEEEEECCHHHHHHH RAVAFRARAHANDILPLSRRDPIAFEGARRAWVKALEQGGISLDDLDLVETHDCFTIAEL HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHH LEYEAMGLAKPGEGYKVVREGITEKTGKLPVNASGGLKSKGHPIGATGVSMHVLCAMQLM HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GEAGDMQIADAKMAGIFNMGGAAVANYVSVLERVK CCCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA; acetyl-CoA
Specific reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]