| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is ahcY [H]
Identifier: 154244144
GI number: 154244144
Start: 186746
End: 188143
Strand: Reverse
Name: ahcY [H]
Synonym: Xaut_0186
Alternate gene names: 154244144
Gene position: 188143-186746 (Counterclockwise)
Preceding gene: 154244147
Following gene: 154244143
Centisome position: 3.54
GC content: 65.81
Gene sequence:
>1398_bases ATGAGCAACGATTACGTGGTGAAGGACATCAACCTTGCGGACTGGGGTCGCAAGGAGCTGGACATCGCCGAAATCGAAAT GCCCGGCCTCATGGCCACCCGCGCCGAATACGGCCCGTCCCAGCCGCTGAAGGGCGCCCGCATCGCCGGCTCCCTGCACA TGACCATCCAGACCGGCGTGCTCATCGAGACGCTGAAGGCGCTGGGCGCCGACGTGCGCTGGGCCTCCTGCAACATCTAC TCCACCCAGGACCATGCCGCGGCCGCCATCGCTGCCGCCGGCGTCCCCGTCTTCGCCGTGAAGGGCGAGACGCTGGAGGA ATACTGGGAATACACCCACCGCATCTTCGAGTGGGCCGACGGCGGCGCGCCGAACATGATCCTGGACGACGGCGGCGACG CCACCCTGCTGGTCCACCTCGGCCTGCGCGCGGAGAACGGCGACACCGCCTTCCTCGACGGCGCCACCAACGAGGAGGAG GAAGTCCTCTTCGCCGCCATCAAGCGCCGCCTGAAGCACAAGCCCGGCTGGTACACCCTGCTCGCCAAGTCCATCCGCGG CGTGACCGAAGAGACCACCACGGGCGTGCACCGTCTCTACGAGATGCAGAAGAAGGGCACGCTGCTGTGGCCCGCCATCA ACGTCAACGACAGCGTCACCAAGTCCAAGTTCGACAACCTCTACGGCTGCCGTGAGTCGCTGGTGGACGGCATCCGCCGC GGCACCGACGTGATGATGGCCGGCAAGGTGGCCATGGTCGCGGGCTTCGGCGACGTGGGCAAGGGCTCCGCCGCCTCCCT GCGCAATGCCGGCTGCCGGGTGATGGTGTCGGAGGTCGATCCCATCTGCGCCCTCCAGGCCGCCATGGAAGGCTATGAGG TCACCACCATGGAGGACGCCGCCAAGCGCGCCGACATCTTCGTGACCGCCACCGGTAACCTGGACGTGATCACGGTGGAT CACATGCGGGCCATGAAGGACCGCGCCATCGTCTGCAACATCGGCCACTTCGACAGCGAGATCCAGGTGGCCGGCCTCAA GAACCTGAAGTGGCACAATGTGAAGCCGCAGGTGGACGAGGTGGAGTTCGCCGACGGCAAGCGCATCATCCTGCTGTCGG AAGGCCGCCTGGTGAACCTCGGCAACGCCACCGGCCACCCGAGCTTCGTGATGAGCGCGTCGTTCACCAACCAGACGCTG GCGCAGATCGAGCTGTTCACCAAGCCCGGCCAGTACGCCAAGGAAGTCTACACCCTGCCCAAGCACCTCGACGAGAAGGT GGCCTCGCTCCACCTCGAGAAGATCGGGGTGAAGCTCACCAAGCTCACCGACCAGCAGTCGGCCTATATCGGCGTGCCCC AGCAGGGCCCGTTCAAGAGCGAGCACTACCGCTACTGA
Upstream 100 bases:
>100_bases CATTTCTTTATATCCTTATTGCCCCAAGGGAGGCGCCGTGCTACAGGCCTCCATCCCGACCTGCGCCCGTGCGGCGCGGC GCATTCCAGCGGAGCAATCC
Downstream 100 bases:
>100_bases ACAGTATCCGGCGGCGCCTCCGCGCCCCACCCCTGATCCAGCGGAACGCCGGCCCTCGGGCCGGCGTTCTTCGTTTTTGA GGGCGATCTGGACCTGTTTC
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MSNDYVVKDINLADWGRKELDIAEIEMPGLMATRAEYGPSQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIY STQDHAAAAIAAAGVPVFAVKGETLEEYWEYTHRIFEWADGGAPNMILDDGGDATLLVHLGLRAENGDTAFLDGATNEEE EVLFAAIKRRLKHKPGWYTLLAKSIRGVTEETTTGVHRLYEMQKKGTLLWPAINVNDSVTKSKFDNLYGCRESLVDGIRR GTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVMVSEVDPICALQAAMEGYEVTTMEDAAKRADIFVTATGNLDVITVD HMRAMKDRAIVCNIGHFDSEIQVAGLKNLKWHNVKPQVDEVEFADGKRIILLSEGRLVNLGNATGHPSFVMSASFTNQTL AQIELFTKPGQYAKEVYTLPKHLDEKVASLHLEKIGVKLTKLTDQQSAYIGVPQQGPFKSEHYRY
Sequences:
>Translated_465_residues MSNDYVVKDINLADWGRKELDIAEIEMPGLMATRAEYGPSQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIY STQDHAAAAIAAAGVPVFAVKGETLEEYWEYTHRIFEWADGGAPNMILDDGGDATLLVHLGLRAENGDTAFLDGATNEEE EVLFAAIKRRLKHKPGWYTLLAKSIRGVTEETTTGVHRLYEMQKKGTLLWPAINVNDSVTKSKFDNLYGCRESLVDGIRR GTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVMVSEVDPICALQAAMEGYEVTTMEDAAKRADIFVTATGNLDVITVD HMRAMKDRAIVCNIGHFDSEIQVAGLKNLKWHNVKPQVDEVEFADGKRIILLSEGRLVNLGNATGHPSFVMSASFTNQTL AQIELFTKPGQYAKEVYTLPKHLDEKVASLHLEKIGVKLTKLTDQQSAYIGVPQQGPFKSEHYRY >Mature_464_residues SNDYVVKDINLADWGRKELDIAEIEMPGLMATRAEYGPSQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASCNIYS TQDHAAAAIAAAGVPVFAVKGETLEEYWEYTHRIFEWADGGAPNMILDDGGDATLLVHLGLRAENGDTAFLDGATNEEEE VLFAAIKRRLKHKPGWYTLLAKSIRGVTEETTTGVHRLYEMQKKGTLLWPAINVNDSVTKSKFDNLYGCRESLVDGIRRG TDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVMVSEVDPICALQAAMEGYEVTTMEDAAKRADIFVTATGNLDVITVDH MRAMKDRAIVCNIGHFDSEIQVAGLKNLKWHNVKPQVDEVEFADGKRIILLSEGRLVNLGNATGHPSFVMSASFTNQTLA QIELFTKPGQYAKEVYTLPKHLDEKVASLHLEKIGVKLTKLTDQQSAYIGVPQQGPFKSEHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=463, Percent_Identity=59.8272138228942, Blast_Score=522, Evalue=1e-148, Organism=Homo sapiens, GI239937451, Length=441, Percent_Identity=59.1836734693878, Blast_Score=493, Evalue=1e-139, Organism=Homo sapiens, GI298286489, Length=467, Percent_Identity=48.3940042826552, Blast_Score=448, Evalue=1e-126, Organism=Homo sapiens, GI195539349, Length=467, Percent_Identity=48.3940042826552, Blast_Score=447, Evalue=1e-126, Organism=Homo sapiens, GI24308043, Length=467, Percent_Identity=48.3940042826552, Blast_Score=447, Evalue=1e-126, Organism=Homo sapiens, GI195539337, Length=467, Percent_Identity=48.3940042826552, Blast_Score=447, Evalue=1e-125, Organism=Homo sapiens, GI21361647, Length=467, Percent_Identity=47.7516059957173, Blast_Score=422, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17506425, Length=466, Percent_Identity=60.7296137339056, Blast_Score=543, Evalue=1e-154, Organism=Saccharomyces cerevisiae, GI6320882, Length=481, Percent_Identity=58.4199584199584, Blast_Score=515, Evalue=1e-147, Organism=Drosophila melanogaster, GI24642172, Length=463, Percent_Identity=63.2829373650108, Blast_Score=540, Evalue=1e-154, Organism=Drosophila melanogaster, GI45553387, Length=464, Percent_Identity=50.6465517241379, Blast_Score=443, Evalue=1e-124, Organism=Drosophila melanogaster, GI24656245, Length=468, Percent_Identity=48.0769230769231, Blast_Score=443, Evalue=1e-124, Organism=Drosophila melanogaster, GI45553385, Length=463, Percent_Identity=50.5399568034557, Blast_Score=440, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 50936; Mature: 50805
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDYVVKDINLADWGRKELDIAEIEMPGLMATRAEYGPSQPLKGARIAGSLHMTIQTGV CCCCEEEEECCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCEEECEEEEEEECCH LIETLKALGADVRWASCNIYSTQDHAAAAIAAAGVPVFAVKGETLEEYWEYTHRIFEWAD HHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCC GGAPNMILDDGGDATLLVHLGLRAENGDTAFLDGATNEEEEVLFAAIKRRLKHKPGWYTL CCCCCEEEECCCCEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHH LAKSIRGVTEETTTGVHRLYEMQKKGTLLWPAINVNDSVTKSKFDNLYGCRESLVDGIRR HHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC GTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVMVSEVDPICALQAAMEGYEVTTMEDA CCCEEEECCEEEEECCCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHCCCEEEEHHHH AKRADIFVTATGNLDVITVDHMRAMKDRAIVCNIGHFDSEIQVAGLKNLKWHNVKPQVDE HCCCCEEEEECCCEEEEEHHHHHHHCCCEEEEECCCCCCEEEEECCCCCEECCCCCCCCC VEFADGKRIILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELFTKPGQYAKEVYTLP EEECCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHH KHLDEKVASLHLEKIGVKLTKLTDQQSAYIGVPQQGPFKSEHYRY HHHHHHHHHHHHHHHCEEEEEECCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure SNDYVVKDINLADWGRKELDIAEIEMPGLMATRAEYGPSQPLKGARIAGSLHMTIQTGV CCCEEEEECCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCEEECEEEEEEECCH LIETLKALGADVRWASCNIYSTQDHAAAAIAAAGVPVFAVKGETLEEYWEYTHRIFEWAD HHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCC GGAPNMILDDGGDATLLVHLGLRAENGDTAFLDGATNEEEEVLFAAIKRRLKHKPGWYTL CCCCCEEEECCCCEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHH LAKSIRGVTEETTTGVHRLYEMQKKGTLLWPAINVNDSVTKSKFDNLYGCRESLVDGIRR HHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC GTDVMMAGKVAMVAGFGDVGKGSAASLRNAGCRVMVSEVDPICALQAAMEGYEVTTMEDA CCCEEEECCEEEEECCCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHCCCEEEEHHHH AKRADIFVTATGNLDVITVDHMRAMKDRAIVCNIGHFDSEIQVAGLKNLKWHNVKPQVDE HCCCCEEEEECCCEEEEEHHHHHHHCCCEEEEECCCCCCEEEEECCCCCEECCCCCCCCC VEFADGKRIILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELFTKPGQYAKEVYTLP EEECCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHH KHLDEKVASLHLEKIGVKLTKLTDQQSAYIGVPQQGPFKSEHYRY HHHHHHHHHHHHHHHCEEEEEECCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA