| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is ywrD [H]
Identifier: 154244147
GI number: 154244147
Start: 189946
End: 191556
Strand: Reverse
Name: ywrD [H]
Synonym: Xaut_0189
Alternate gene names: 154244147
Gene position: 191556-189946 (Counterclockwise)
Preceding gene: 154244149
Following gene: 154244144
Centisome position: 3.61
GC content: 72.13
Gene sequence:
>1611_bases ATGCTGCCGGCCGAAGCCCACGAGAGCCTTCACGCCATGGGGGGCATGGTCGCCGCCCCGCACCAGCTGGCGGCGGAGGC GGGACGCGAGGTGCTGGCCGAGGGCGGCAACGCCATCGAGGCCATGGTGGCGGCAGCCGCCGCCATCGCCGTGGTCTATC CGCACATGAACCATGTGGGCGGCGACGGCTTCTGGCTCATCCGCGAGCCCTCCGGACGGGTGCGCTACATCGAGGCCTGC GGCTTCGCCGGAGCCCGCGCCACCATTCCCTTCTACCATGAGGTCGGCCTCGGGGCGGTGCCCACCCGGGGGCCGCTGGC CGCCGTCACCGTGCCCGGCGCGGTGGATGGCTGGCGCCTCGCCCTTGAGGCCGCCGCGGTCCATGGCGGCCGCATGACAC TCAAGAGGCTTCTGGAGCCCGCCGTCCGTCATGCCCGCGAGGGCGTGGCCGTCTCGCGCTCGCAGGCCGCCCTCACGGCG CAGAAGAAGGCCGAACTGGAAGACGCGCCCGGCTTCGCCGCCGCCTTCCTCACCGCGGACCGGGCGGTGCCGCAGGCGGG AACGCTCCAGCGCCAGCAGCGCCTCGCCGATACGCTGGACCATCTCGCTCGCGCCGGCCTCGCCGATTTCTATCGCGGCG ACGTGGGCCGCGAGATCGGGACCGACCTCGAGCGCATCGGCAGCCCGGTCACCCGGGAGGATCTCAAGCGCTATGCGGCG GTGGAGCGCCCGCCGCTGTCCGTGGACATCGGCGTCGGCCGGCTGTTCAACGCCCCGCCGCCCACCCAGGGGCTGGCCTC CCTGCTCATCCTCGCGCTGTTCGACCGGCTGAAGGTAAAGCGCGGCGACAGCTTCGAGCACGTGCACGGCCTCATCGAGG CCACCAAACGCGCCTTCATGGTGCGCGACAAGGTGGTGTGCGACTATGATCACCTCACCCACGACCTTGCCGCCCTGCTC ACCCCCGAGGCCATCGCCAAACGGGCTGACGGCATCGAGATGGGCCGCGCCCTCCCCTGGCCGCAGGCCAAGGCCGGCGG CGACACGGTGTGGCTCGGCGCGACGGACAAGTCCGGGCTGGTGGTGTCCTACATCCAGTCCATCTTCTTCGAGTTCGGCT CGGGCTGCGTGCTGCCTTCCACCGGTGTGCTGATGCAGAATCGCGGCGCCAGCTTCTCGCTGGAGCCGGGCGCGCTCAAT CCGCTGAAGCCCGGCCGGCGGCCGTTCCATACCCTGAACCCGGCGCTGGCGGTGCTCGCCGACGGGCGGGTGATGGCTTA TGGCACCATGGGCGGGGAAGGCCAGCCGCAGACCCAGTCCGCCATCTTCAGCCGCCACGTGCTGTTCGACGTGCCGCTGG GAGAGGCCATCGCCCGGCCGCGCTGGCTGCTGGGCCGCACCTGGGGCGATGTGGAGACCCGGCTGCGACTGGAGCCGCGC TTCGACGACGAGGTGGTGGAGCGCCTGAAGCTGGTGGGGCACGACCTGGCGCTGGTTCCGGAAGCCTACAGCGACACCAT GGGGCACGCGGGGGCGGTGGTGCTGCATCCTGGCGGACGCATGGAGGGCGCGCACGACCCGCGCTCGGACGGCGGCGCGG CGGGGGTGTAG
Upstream 100 bases:
>100_bases CTCATGCCGAAGGCCTTGGTCCTGAACGGGTCGGGAAACTGCGACGCGCGCGCCGCCGGGTCAAGTCCGACCCGCCGGAA CGCCGAGAAGGAGACCTTGC
Downstream 100 bases:
>100_bases GGCGCCGCAAGGCGCCCGCGACCACCCGGGAGGCCAAAATAAAACCGGCTGCCCCCCGGGGAGAGGGCAGCCGGCGGCTT CGGCTCTGTCTTCGGGCATA
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
>536_residues MLPAEAHESLHAMGGMVAAPHQLAAEAGREVLAEGGNAIEAMVAAAAAIAVVYPHMNHVGGDGFWLIREPSGRVRYIEAC GFAGARATIPFYHEVGLGAVPTRGPLAAVTVPGAVDGWRLALEAAAVHGGRMTLKRLLEPAVRHAREGVAVSRSQAALTA QKKAELEDAPGFAAAFLTADRAVPQAGTLQRQQRLADTLDHLARAGLADFYRGDVGREIGTDLERIGSPVTREDLKRYAA VERPPLSVDIGVGRLFNAPPPTQGLASLLILALFDRLKVKRGDSFEHVHGLIEATKRAFMVRDKVVCDYDHLTHDLAALL TPEAIAKRADGIEMGRALPWPQAKAGGDTVWLGATDKSGLVVSYIQSIFFEFGSGCVLPSTGVLMQNRGASFSLEPGALN PLKPGRRPFHTLNPALAVLADGRVMAYGTMGGEGQPQTQSAIFSRHVLFDVPLGEAIARPRWLLGRTWGDVETRLRLEPR FDDEVVERLKLVGHDLALVPEAYSDTMGHAGAVVLHPGGRMEGAHDPRSDGGAAGV
Sequences:
>Translated_536_residues MLPAEAHESLHAMGGMVAAPHQLAAEAGREVLAEGGNAIEAMVAAAAAIAVVYPHMNHVGGDGFWLIREPSGRVRYIEAC GFAGARATIPFYHEVGLGAVPTRGPLAAVTVPGAVDGWRLALEAAAVHGGRMTLKRLLEPAVRHAREGVAVSRSQAALTA QKKAELEDAPGFAAAFLTADRAVPQAGTLQRQQRLADTLDHLARAGLADFYRGDVGREIGTDLERIGSPVTREDLKRYAA VERPPLSVDIGVGRLFNAPPPTQGLASLLILALFDRLKVKRGDSFEHVHGLIEATKRAFMVRDKVVCDYDHLTHDLAALL TPEAIAKRADGIEMGRALPWPQAKAGGDTVWLGATDKSGLVVSYIQSIFFEFGSGCVLPSTGVLMQNRGASFSLEPGALN PLKPGRRPFHTLNPALAVLADGRVMAYGTMGGEGQPQTQSAIFSRHVLFDVPLGEAIARPRWLLGRTWGDVETRLRLEPR FDDEVVERLKLVGHDLALVPEAYSDTMGHAGAVVLHPGGRMEGAHDPRSDGGAAGV >Mature_536_residues MLPAEAHESLHAMGGMVAAPHQLAAEAGREVLAEGGNAIEAMVAAAAAIAVVYPHMNHVGGDGFWLIREPSGRVRYIEAC GFAGARATIPFYHEVGLGAVPTRGPLAAVTVPGAVDGWRLALEAAAVHGGRMTLKRLLEPAVRHAREGVAVSRSQAALTA QKKAELEDAPGFAAAFLTADRAVPQAGTLQRQQRLADTLDHLARAGLADFYRGDVGREIGTDLERIGSPVTREDLKRYAA VERPPLSVDIGVGRLFNAPPPTQGLASLLILALFDRLKVKRGDSFEHVHGLIEATKRAFMVRDKVVCDYDHLTHDLAALL TPEAIAKRADGIEMGRALPWPQAKAGGDTVWLGATDKSGLVVSYIQSIFFEFGSGCVLPSTGVLMQNRGASFSLEPGALN PLKPGRRPFHTLNPALAVLADGRVMAYGTMGGEGQPQTQSAIFSRHVLFDVPLGEAIARPRWLLGRTWGDVETRLRLEPR FDDEVVERLKLVGHDLALVPEAYSDTMGHAGAVVLHPGGRMEGAHDPRSDGGAAGV
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=547, Percent_Identity=26.508226691042, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI73915090, Length=547, Percent_Identity=26.508226691042, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI73915096, Length=547, Percent_Identity=26.508226691042, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI73915094, Length=547, Percent_Identity=26.508226691042, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI113429324, Length=546, Percent_Identity=26.3736263736264, Blast_Score=119, Evalue=1e-26, Organism=Homo sapiens, GI113429326, Length=552, Percent_Identity=25.7246376811594, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI109148539, Length=502, Percent_Identity=27.2908366533865, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI153266885, Length=559, Percent_Identity=25.9391771019678, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI153266901, Length=560, Percent_Identity=25.8928571428571, Blast_Score=76, Evalue=1e-13, Organism=Escherichia coli, GI1789856, Length=547, Percent_Identity=29.981718464351, Blast_Score=200, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17506189, Length=448, Percent_Identity=24.7767857142857, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI72000294, Length=550, Percent_Identity=24, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI212646519, Length=550, Percent_Identity=24, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI193208245, Length=492, Percent_Identity=24.5934959349593, Blast_Score=95, Evalue=8e-20, Organism=Caenorhabditis elegans, GI193208247, Length=492, Percent_Identity=24.5934959349593, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI18859893, Length=530, Percent_Identity=26.2264150943396, Blast_Score=122, Evalue=6e-28, Organism=Drosophila melanogaster, GI161077496, Length=518, Percent_Identity=23.5521235521236, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI161077878, Length=555, Percent_Identity=23.963963963964, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24642670, Length=555, Percent_Identity=23.963963963964, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24642666, Length=555, Percent_Identity=23.963963963964, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI45551474, Length=555, Percent_Identity=23.963963963964, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI161077880, Length=555, Percent_Identity=23.963963963964, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI18859741, Length=382, Percent_Identity=24.869109947644, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 57050; Mature: 57050
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPAEAHESLHAMGGMVAAPHQLAAEAGREVLAEGGNAIEAMVAAAAAIAVVYPHMNHVG CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHCCC GDGFWLIREPSGRVRYIEACGFAGARATIPFYHEVGLGAVPTRGPLAAVTVPGAVDGWRL CCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCHHHH ALEAAAVHGGRMTLKRLLEPAVRHAREGVAVSRSQAALTAQKKAELEDAPGFAAAFLTAD HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH RAVPQAGTLQRQQRLADTLDHLARAGLADFYRGDVGREIGTDLERIGSPVTREDLKRYAA HCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHCCHHHHCCCCCHHHHHHHHH VERPPLSVDIGVGRLFNAPPPTQGLASLLILALFDRLKVKRGDSFEHVHGLIEATKRAFM CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VRDKVVCDYDHLTHDLAALLTPEAIAKRADGIEMGRALPWPQAKAGGDTVWLGATDKSGL HHCCEEECHHHHHHHHHHHHCHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCH VVSYIQSIFFEFGSGCVLPSTGVLMQNRGASFSLEPGALNPLKPGRRPFHTLNPALAVLA HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCHHCCHHHHEEE DGRVMAYGTMGGEGQPQTQSAIFSRHVLFDVPLGEAIARPRWLLGRTWGDVETRLRLEPR CCEEEEEECCCCCCCCHHHHHHHHHHEEEECCCHHHHCCCCHHHCCCCCCCCEEEEECCC FDDEVVERLKLVGHDLALVPEAYSDTMGHAGAVVLHPGGRMEGAHDPRSDGGAAGV CCHHHHHHHHHHCCCCEECCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLPAEAHESLHAMGGMVAAPHQLAAEAGREVLAEGGNAIEAMVAAAAAIAVVYPHMNHVG CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHCCC GDGFWLIREPSGRVRYIEACGFAGARATIPFYHEVGLGAVPTRGPLAAVTVPGAVDGWRL CCEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCHHHH ALEAAAVHGGRMTLKRLLEPAVRHAREGVAVSRSQAALTAQKKAELEDAPGFAAAFLTAD HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH RAVPQAGTLQRQQRLADTLDHLARAGLADFYRGDVGREIGTDLERIGSPVTREDLKRYAA HCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHCCHHHHCCCCCHHHHHHHHH VERPPLSVDIGVGRLFNAPPPTQGLASLLILALFDRLKVKRGDSFEHVHGLIEATKRAFM CCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VRDKVVCDYDHLTHDLAALLTPEAIAKRADGIEMGRALPWPQAKAGGDTVWLGATDKSGL HHCCEEECHHHHHHHHHHHHCHHHHHHHCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCH VVSYIQSIFFEFGSGCVLPSTGVLMQNRGASFSLEPGALNPLKPGRRPFHTLNPALAVLA HHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCHHCCHHHHEEE DGRVMAYGTMGGEGQPQTQSAIFSRHVLFDVPLGEAIARPRWLLGRTWGDVETRLRLEPR CCEEEEEECCCCCCCCHHHHHHHHHHEEEECCCHHHHCCCCHHHCCCCCCCCEEEEECCC FDDEVVERLKLVGHDLALVPEAYSDTMGHAGAVVLHPGGRMEGAHDPRSDGGAAGV CCHHHHHHHHHHCCCCEECCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]