Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150400864

Identifier: 150400864

GI number: 150400864

Start: 451136

End: 452080

Strand: Reverse

Name: 150400864

Synonym: Maeo_0432

Alternate gene names: NA

Gene position: 452080-451136 (Counterclockwise)

Preceding gene: 150400866

Following gene: 150400863

Centisome position: 28.8

GC content: 22.86

Gene sequence:

>945_bases
ATGCTATCCGATATATTATATAAGTTATCCTCAAATAAATATGATAATAATGTTATTTATTTTTCTAAAATACTTAGTGA
TTATTATAAAAATAATAATATATTCCAATATAAAGATTATTTTGAAAGTATTGGCATTGTTGAAAAAAATGATTTGCTAT
TATATGGAAAAAACTATCCGTTATTTAGGTCTTTATTGTATTTTAATGAAGTTCCACTGTTTAAAAATGAATCCCAGTCA
ATTTTATTTTTAAAAAATAATAATTTTAATCCAAATGATAAATTGATAAATTTAAATAAAGATAAAAAAAAGAAATTGGG
AATATTGTTATTAAAAGAAATTGCCAAAAATATACCTGCTGAATATGTAAAATATGCTCCAAAATTGATATTTGGTAAAT
GCTATTATTTAAAAAAATATAATATTGAATTAAAAGAATATATTTCAAAATTAAATGCACTATATAAATTGAAAAAATAC
AATGAAATTGAAAAATGTGTAATATATCAAAAATTGCCCGATGAAGAATTAGTAAATAAATATAAAATAAAATTGGCAAA
ATCCATAAAATTATTTAATAAAGAGTTAAATAATAGAAAAATAAGATACACCACTATTGAACGAAATGGCAGGGAGCTCC
CCTGTCAATATATTTATATAAAACAATCACTATTTGACAAAATAAAGGGCTGGGTTTTTGGCTCTATTGATGGGCAACAT
TATCCAACGATTGTAAATACTGCATATTCCCATCCAAAAATAGATTATTTAAAACCATTTTTTATATTGGTGGATAATGG
CAATATTGGTGTTTTTGCCGGAGCTCCGAAACTTTTATATTTTAAGGACAACTTAACATTAAATCATTTAAATTTGACTG
GAAAACATACATATTTTGGGACTTGGGATTATGAAATGTTTGAAAAATTCATTGAGGGTAAATAA

Upstream 100 bases:

>100_bases
CGATTTCAGGGGTTAGATTTTTCATTCTTATGCCCGATGTTCCAAATAATTTCATATTACCACCAAAAATTATAAATGAT
ATTAATTAGTAGTTTGTATT

Downstream 100 bases:

>100_bases
TATACTGTTAAGGGCATATAATGTATCAAATATTATGAGTTATTAATAAATATCAGGTATGGTGAAATTGATGAATATAT
TAATAATTACAGAATATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLSDILYKLSSNKYDNNVIYFSKILSDYYKNNNIFQYKDYFESIGIVEKNDLLLYGKNYPLFRSLLYFNEVPLFKNESQS
ILFLKNNNFNPNDKLINLNKDKKKKLGILLLKEIAKNIPAEYVKYAPKLIFGKCYYLKKYNIELKEYISKLNALYKLKKY
NEIEKCVIYQKLPDEELVNKYKIKLAKSIKLFNKELNNRKIRYTTIERNGRELPCQYIYIKQSLFDKIKGWVFGSIDGQH
YPTIVNTAYSHPKIDYLKPFFILVDNGNIGVFAGAPKLLYFKDNLTLNHLNLTGKHTYFGTWDYEMFEKFIEGK

Sequences:

>Translated_314_residues
MLSDILYKLSSNKYDNNVIYFSKILSDYYKNNNIFQYKDYFESIGIVEKNDLLLYGKNYPLFRSLLYFNEVPLFKNESQS
ILFLKNNNFNPNDKLINLNKDKKKKLGILLLKEIAKNIPAEYVKYAPKLIFGKCYYLKKYNIELKEYISKLNALYKLKKY
NEIEKCVIYQKLPDEELVNKYKIKLAKSIKLFNKELNNRKIRYTTIERNGRELPCQYIYIKQSLFDKIKGWVFGSIDGQH
YPTIVNTAYSHPKIDYLKPFFILVDNGNIGVFAGAPKLLYFKDNLTLNHLNLTGKHTYFGTWDYEMFEKFIEGK
>Mature_314_residues
MLSDILYKLSSNKYDNNVIYFSKILSDYYKNNNIFQYKDYFESIGIVEKNDLLLYGKNYPLFRSLLYFNEVPLFKNESQS
ILFLKNNNFNPNDKLINLNKDKKKKLGILLLKEIAKNIPAEYVKYAPKLIFGKCYYLKKYNIELKEYISKLNALYKLKKY
NEIEKCVIYQKLPDEELVNKYKIKLAKSIKLFNKELNNRKIRYTTIERNGRELPCQYIYIKQSLFDKIKGWVFGSIDGQH
YPTIVNTAYSHPKIDYLKPFFILVDNGNIGVFAGAPKLLYFKDNLTLNHLNLTGKHTYFGTWDYEMFEKFIEGK

Specific function: Unknown

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0977 C-terminal region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37335; Mature: 37335

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDILYKLSSNKYDNNVIYFSKILSDYYKNNNIFQYKDYFESIGIVEKNDLLLYGKNYP
CHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCEEEEHHHHHHCCCEECCCEEEEECCCH
LFRSLLYFNEVPLFKNESQSILFLKNNNFNPNDKLINLNKDKKKKLGILLLKEIAKNIPA
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCH
EYVKYAPKLIFGKCYYLKKYNIELKEYISKLNALYKLKKYNEIEKCVIYQKLPDEELVNK
HHHHHCCHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHH
YKIKLAKSIKLFNKELNNRKIRYTTIERNGRELPCQYIYIKQSLFDKIKGWVFGSIDGQH
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEHHHHHHHHCCEEEECCCCCC
YPTIVNTAYSHPKIDYLKPFFILVDNGNIGVFAGAPKLLYFKDNLTLNHLNLTGKHTYFG
CCCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCEEEEEEECCCEEEEE
TWDYEMFEKFIEGK
CCCHHHHHHHHCCC
>Mature Secondary Structure
MLSDILYKLSSNKYDNNVIYFSKILSDYYKNNNIFQYKDYFESIGIVEKNDLLLYGKNYP
CHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCEEEEHHHHHHCCCEECCCEEEEECCCH
LFRSLLYFNEVPLFKNESQSILFLKNNNFNPNDKLINLNKDKKKKLGILLLKEIAKNIPA
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCH
EYVKYAPKLIFGKCYYLKKYNIELKEYISKLNALYKLKKYNEIEKCVIYQKLPDEELVNK
HHHHHCCHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHH
YKIKLAKSIKLFNKELNNRKIRYTTIERNGRELPCQYIYIKQSLFDKIKGWVFGSIDGQH
HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEHHHHHHHHCCEEEECCCCCC
YPTIVNTAYSHPKIDYLKPFFILVDNGNIGVFAGAPKLLYFKDNLTLNHLNLTGKHTYFG
CCCEEECCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEEEECCCEEEEEEECCCEEEEE
TWDYEMFEKFIEGK
CCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]