| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is hemA
Identifier: 150400490
GI number: 150400490
Start: 59127
End: 60278
Strand: Reverse
Name: hemA
Synonym: Maeo_0052
Alternate gene names: 150400490
Gene position: 60278-59127 (Counterclockwise)
Preceding gene: 150400491
Following gene: 150400489
Centisome position: 3.84
GC content: 31.08
Gene sequence:
>1152_bases ATGCTTTTATTTAGGGCGGATTATAATAACTATGCTGTATCGGAGCTCCAAAAATTAAGGTTCGATGAAGACGAATTTTA TAAAAAATATGATAATTGTGTATTGGTTCAAACCTGTAATAGGATAGAAATTTATTTCGATAAAAATGCCAAAATTATAG ATATAAATGAATTTGCTGAATTTGAAATGATAAAATCTAACAATGCAATAAAACACCTATTAAGAACGGCGTCAGGATTA AACTCTATGATAGTGGGGGAAGACCAAATAATCGGGCAAATAAAAAATAGCCATCGTAAAGCAAAGGAGCTTAAAAAAAC CACGAAATATTTGGATACAATTTTTTTAAAGGCAATACACACAGGGCAAAAAGTTAGAAATAATACCAAAATAAATAAAG GCTGTGTCTCCATCGGTAGTGCCGCCGTTCAATTAGCTGAAAAAACCGTAGGATTAAATAATAAAAATATCCTTGTAGTT GGAGCGGGAGAAATAGCTACGCTGGTGGCTAAGGCACTTATTGAGAAAAATATACGGGCTATTGTGGTATCAAATAGAAC CTATGAACGGGCGGAGCTCCTTGCAAAAAAATTAAATGGTATGGCCGTGCATTTTGACAAATTGGGAGAGGCTATAAATT ACAACGATATAATTATATGTGCCACAGGAGCTCCCCATGCAATAATAGATAAGGATAGATTAAAAAATATCAAAGGATAT AAAGTATTAATAGATATAGCAAATCCCCGAGATGTTAGCGATGATGTTATGGAGCTCCCGAATATTAAATTATACACCAT TGACGATTTAAAAATGGTATCTGAGGAGAATCTAAAAAAAAGAAAGGACGAAATACCCCGTGTTGAAAAAATTATTGAAG AGGAACTGTCTGTATTAACAAAACAACTACGAAAACTTAAATTTGAAAATACTATTAAAAATTATGATTTATATATCGAA AATCTAAGAAAAAGGGAAATGAATAAAGCCCTAAACATGATAGAAAATGGAAAAGACCCAACCGTAGTATTGGAAAAGTT TTCCAAAGTTTTTGCCAATAAACTAATTTCAGATTTTGTAAATATAGTTAATGATGATACAATAGGAGATATTGAACGAG TTGTAAATAAATTAAATAAAAATAAAATATAA
Upstream 100 bases:
>100_bases TAATTGATAAATATACTAAATAAAAAATAATAATAATAATAATAATAATATATGAAAATATGATGAATAGTAAGGAATAA AATAAACTACGGTGTGTATA
Downstream 100 bases:
>100_bases ATCGTGGTAAAATGGAAATAGAAAAAATGATAAAACAATTAAATCCAAAATTCAGAAATATAGACGGTAAAAAATTATTA ATAGCAATTGCCATTGATGA
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MLLFRADYNNYAVSELQKLRFDEDEFYKKYDNCVLVQTCNRIEIYFDKNAKIIDINEFAEFEMIKSNNAIKHLLRTASGL NSMIVGEDQIIGQIKNSHRKAKELKKTTKYLDTIFLKAIHTGQKVRNNTKINKGCVSIGSAAVQLAEKTVGLNNKNILVV GAGEIATLVAKALIEKNIRAIVVSNRTYERAELLAKKLNGMAVHFDKLGEAINYNDIIICATGAPHAIIDKDRLKNIKGY KVLIDIANPRDVSDDVMELPNIKLYTIDDLKMVSEENLKKRKDEIPRVEKIIEEELSVLTKQLRKLKFENTIKNYDLYIE NLRKREMNKALNMIENGKDPTVVLEKFSKVFANKLISDFVNIVNDDTIGDIERVVNKLNKNKI
Sequences:
>Translated_383_residues MLLFRADYNNYAVSELQKLRFDEDEFYKKYDNCVLVQTCNRIEIYFDKNAKIIDINEFAEFEMIKSNNAIKHLLRTASGL NSMIVGEDQIIGQIKNSHRKAKELKKTTKYLDTIFLKAIHTGQKVRNNTKINKGCVSIGSAAVQLAEKTVGLNNKNILVV GAGEIATLVAKALIEKNIRAIVVSNRTYERAELLAKKLNGMAVHFDKLGEAINYNDIIICATGAPHAIIDKDRLKNIKGY KVLIDIANPRDVSDDVMELPNIKLYTIDDLKMVSEENLKKRKDEIPRVEKIIEEELSVLTKQLRKLKFENTIKNYDLYIE NLRKREMNKALNMIENGKDPTVVLEKFSKVFANKLISDFVNIVNDDTIGDIERVVNKLNKNKI >Mature_383_residues MLLFRADYNNYAVSELQKLRFDEDEFYKKYDNCVLVQTCNRIEIYFDKNAKIIDINEFAEFEMIKSNNAIKHLLRTASGL NSMIVGEDQIIGQIKNSHRKAKELKKTTKYLDTIFLKAIHTGQKVRNNTKINKGCVSIGSAAVQLAEKTVGLNNKNILVV GAGEIATLVAKALIEKNIRAIVVSNRTYERAELLAKKLNGMAVHFDKLGEAINYNDIIICATGAPHAIIDKDRLKNIKGY KVLIDIANPRDVSDDVMELPNIKLYTIDDLKMVSEENLKKRKDEIPRVEKIIEEELSVLTKQLRKLKFENTIKNYDLYIE NLRKREMNKALNMIENGKDPTVVLEKFSKVFANKLISDFVNIVNDDTIGDIERVVNKLNKNKI
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family
Homologues:
Organism=Escherichia coli, GI1787461, Length=387, Percent_Identity=30.4909560723514, Blast_Score=176, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEM1_META3 (A6UT22)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324256.1 - ProteinModelPortal: A6UT22 - SMR: A6UT22 - STRING: A6UT22 - GeneID: 5326829 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0052 - eggNOG: arNOG04783 - HOGENOM: HBG732626 - OMA: GEDQIIG - ProtClustDB: PRK00045 - BioCyc: MAEO419665:MAEO_0052-MONOMER - GO: GO:0005737 - HAMAP: MF_00087 - InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR003462 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - PANTHER: PTHR13812 - PIRSF: PIRSF000445 - TIGRFAMs: TIGR01035
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH; SSF69075 4pyrrol_synth_GluRdtase_C; SSF69742 GlutR
EC number: =1.2.1.70
Molecular weight: Translated: 43752; Mature: 43752
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00747 GLUTR
Important sites: ACT_SITE 39-39 BINDING 82-82 BINDING 93-93
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLFRADYNNYAVSELQKLRFDEDEFYKKYDNCVLVQTCNRIEIYFDKNAKIIDINEFAE CEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCEEEEEECCEEEEEECCCCEEEECCHHHH FEMIKSNNAIKHLLRTASGLNSMIVGEDQIIGQIKNSHRKAKELKKTTKYLDTIFLKAIH HHHHHCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGQKVRNNTKINKGCVSIGSAAVQLAEKTVGLNNKNILVVGAGEIATLVAKALIEKNIRA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCEE IVVSNRTYERAELLAKKLNGMAVHFDKLGEAINYNDIIICATGAPHAIIDKDRLKNIKGY EEEECCCHHHHHHHHHHHCCCEEEHHHHCCCCCCCCEEEEECCCCCCEECHHHHCCCCCE KVLIDIANPRDVSDDVMELPNIKLYTIDDLKMVSEENLKKRKDEIPRVEKIIEEELSVLT EEEEEECCCCCCCHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KQLRKLKFENTIKNYDLYIENLRKREMNKALNMIENGKDPTVVLEKFSKVFANKLISDFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH NIVNDDTIGDIERVVNKLNKNKI HHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MLLFRADYNNYAVSELQKLRFDEDEFYKKYDNCVLVQTCNRIEIYFDKNAKIIDINEFAE CEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCEEEEEECCEEEEEECCCCEEEECCHHHH FEMIKSNNAIKHLLRTASGLNSMIVGEDQIIGQIKNSHRKAKELKKTTKYLDTIFLKAIH HHHHHCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGQKVRNNTKINKGCVSIGSAAVQLAEKTVGLNNKNILVVGAGEIATLVAKALIEKNIRA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCEE IVVSNRTYERAELLAKKLNGMAVHFDKLGEAINYNDIIICATGAPHAIIDKDRLKNIKGY EEEECCCHHHHHHHHHHHCCCEEEHHHHCCCCCCCCEEEEECCCCCCEECHHHHCCCCCE KVLIDIANPRDVSDDVMELPNIKLYTIDDLKMVSEENLKKRKDEIPRVEKIIEEELSVLT EEEEEECCCCCCCHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KQLRKLKFENTIKNYDLYIENLRKREMNKALNMIENGKDPTVVLEKFSKVFANKLISDFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH NIVNDDTIGDIERVVNKLNKNKI HHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA