Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150398993

Identifier: 150398993

GI number: 150398993

Start: 282010

End: 283494

Strand: Reverse

Name: 150398993

Synonym: Mevan_0239

Alternate gene names: NA

Gene position: 283494-282010 (Counterclockwise)

Preceding gene: 150398994

Following gene: 150398992

Centisome position: 16.48

GC content: 27.95

Gene sequence:

>1485_bases
ATGGACAGTAGTGTCTTGATACAGCAATGCAACGAATTTTTAGATGGGCTATCTAATTTTGGAGATAATTTTAAAAAACC
ATTTCTTGAAAAAGAAAATAGTGTAAACGAACTTCAAAAGAGTCTTGAATGTAATTTATGCATTTTAGAAAATTTAAGGG
AAAAAATGGAGTTACAGGGCTTTGAAACGCCGTATATTGGTGTTGGGCAGATTAAAGGTGGAGAAGACGATGATATTTAT
GAAATAATTAACTATTCTTCGTATTTAAGAAGAATGGTAGATGAAAAAAAAGGTTCTCTTGAAAGGGCAAAATACGCAAT
AGTTTCACACAAAATTGCAATTGGAAATCTTTTAGATGAATTTGGAAATAAAGATATACTTCAAAATTTACCTTACAACG
GTTCGTATAAAGAACACTTATCAAAAATACCCCCACTGTTTTTTAAATCATATAAAAACATTTTAAGTGCATTTGAATCA
GAAGGATTTTCAAAGCTTCGTTCTTCAAAAATTAAGGGTTTAGAACATGCTTATCCTGAAAAAGGCGTAGTAAGTTCGAT
AACTCTGTCTTTAGTTATTATTGAAAATGGGAAAAGAAAATTTAAGCGTGTAAAAATTGAAGAAGAAGATTATGAAGGAT
ATATAAAAAGGACGTATGGGGACGCCATAATTACTTCAGTAAAAAAGAACTATTCAAAAAATAAGCTACTAAATGACCAA
TATGTTAAAAAAACACTTACTTTAGCTTATTTTACAACGTATTTGCCGGAAATAAAGGAAAAAATCAATTTAGAAGTAAA
AGAGTCGCTTTCAAAAGAAGAACGGTGCTTAATTAAAAAATACAGTAACATTTGCGAAAATTTTGAAAATGATGTTTATG
AAGGCGGAATTATTGATGTTAGGGCACTTGAAGAAACGAAACTAAAAAAAATGAATATAAAAACAGATTTAGAGGAAAAA
GGACTGTATAAAAATGGAAAATTATTAGAAAATTTAAAAAAATCACTTGAAATACAAAATAGGATTTTTGAATCGATTTC
CGTTGAAATTCCGATAAAAAAGATTTCAAAAGATCTTTTTATGTACTATCTTTTAAAGTCGCCTGACGAAAGAAGTCGTT
CCCATATGTTTTCATCAATACTTGTAACTCCTTCAACTTCCCAATTGAAATGGCTTGATATTGAAGAAATTGAGCCAAAA
AAAATACTTGATTTAAAGTTTATGTTTGAAAAAGAGCTTCCAAAGTATGAAATATCGTTAAAAAATATAGGTGGAGTTTC
TATATACTTATTATATGGTATGGAAAAAGCTTTAGAGTACGGTTTTGAAAAAACAGGAATTGAAGATATTTTAAAATTAA
TTGCTGTAATTGAAGACATTAAAGAAAATTTAAAAGGAAAAATAGACTTAAAAGTTCTTGAAAAGTATTGTAAAATTAAA
AAAGAAAAAACGAAAAGCTTTTTAAATGCCCTTGGAAAACTTTAA

Upstream 100 bases:

>100_bases
TAAAAGGTCAGATAACCTATCCAAAATATATCTGTCCTGAAAATGCATTAATTAATATTGGAACTTTTGTAGAAAGAATT
TAAATTTAATTTGGGAAATC

Downstream 100 bases:

>100_bases
GAGACTTTGAAAAAATGATAAATCCAATTTATTTAATTATTGCAGACCTTTTAGATAGATACATTGGAGAGCCTCCTGAA
AAACTCCATCCTGTTGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MDSSVLIQQCNEFLDGLSNFGDNFKKPFLEKENSVNELQKSLECNLCILENLREKMELQGFETPYIGVGQIKGGEDDDIY
EIINYSSYLRRMVDEKKGSLERAKYAIVSHKIAIGNLLDEFGNKDILQNLPYNGSYKEHLSKIPPLFFKSYKNILSAFES
EGFSKLRSSKIKGLEHAYPEKGVVSSITLSLVIIENGKRKFKRVKIEEEDYEGYIKRTYGDAIITSVKKNYSKNKLLNDQ
YVKKTLTLAYFTTYLPEIKEKINLEVKESLSKEERCLIKKYSNICENFENDVYEGGIIDVRALEETKLKKMNIKTDLEEK
GLYKNGKLLENLKKSLEIQNRIFESISVEIPIKKISKDLFMYYLLKSPDERSRSHMFSSILVTPSTSQLKWLDIEEIEPK
KILDLKFMFEKELPKYEISLKNIGGVSIYLLYGMEKALEYGFEKTGIEDILKLIAVIEDIKENLKGKIDLKVLEKYCKIK
KEKTKSFLNALGKL

Sequences:

>Translated_494_residues
MDSSVLIQQCNEFLDGLSNFGDNFKKPFLEKENSVNELQKSLECNLCILENLREKMELQGFETPYIGVGQIKGGEDDDIY
EIINYSSYLRRMVDEKKGSLERAKYAIVSHKIAIGNLLDEFGNKDILQNLPYNGSYKEHLSKIPPLFFKSYKNILSAFES
EGFSKLRSSKIKGLEHAYPEKGVVSSITLSLVIIENGKRKFKRVKIEEEDYEGYIKRTYGDAIITSVKKNYSKNKLLNDQ
YVKKTLTLAYFTTYLPEIKEKINLEVKESLSKEERCLIKKYSNICENFENDVYEGGIIDVRALEETKLKKMNIKTDLEEK
GLYKNGKLLENLKKSLEIQNRIFESISVEIPIKKISKDLFMYYLLKSPDERSRSHMFSSILVTPSTSQLKWLDIEEIEPK
KILDLKFMFEKELPKYEISLKNIGGVSIYLLYGMEKALEYGFEKTGIEDILKLIAVIEDIKENLKGKIDLKVLEKYCKIK
KEKTKSFLNALGKL
>Mature_494_residues
MDSSVLIQQCNEFLDGLSNFGDNFKKPFLEKENSVNELQKSLECNLCILENLREKMELQGFETPYIGVGQIKGGEDDDIY
EIINYSSYLRRMVDEKKGSLERAKYAIVSHKIAIGNLLDEFGNKDILQNLPYNGSYKEHLSKIPPLFFKSYKNILSAFES
EGFSKLRSSKIKGLEHAYPEKGVVSSITLSLVIIENGKRKFKRVKIEEEDYEGYIKRTYGDAIITSVKKNYSKNKLLNDQ
YVKKTLTLAYFTTYLPEIKEKINLEVKESLSKEERCLIKKYSNICENFENDVYEGGIIDVRALEETKLKKMNIKTDLEEK
GLYKNGKLLENLKKSLEIQNRIFESISVEIPIKKISKDLFMYYLLKSPDERSRSHMFSSILVTPSTSQLKWLDIEEIEPK
KILDLKFMFEKELPKYEISLKNIGGVSIYLLYGMEKALEYGFEKTGIEDILKLIAVIEDIKENLKGKIDLKVLEKYCKIK
KEKTKSFLNALGKL

Specific function: Unknown

COG id: COG1771

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007503 [H]

Pfam domain/function: PF04409 DUF530 [H]

EC number: NA

Molecular weight: Translated: 57182; Mature: 57182

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSVLIQQCNEFLDGLSNFGDNFKKPFLEKENSVNELQKSLECNLCILENLREKMELQG
CCCHHHHHHHHHHHHHHHHHCCHHHCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC
FETPYIGVGQIKGGEDDDIYEIINYSSYLRRMVDEKKGSLERAKYAIVSHKIAIGNLLDE
CCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FGNKDILQNLPYNGSYKEHLSKIPPLFFKSYKNILSAFESEGFSKLRSSKIKGLEHAYPE
HCCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
KGVVSSITLSLVIIENGKRKFKRVKIEEEDYEGYIKRTYGDAIITSVKKNYSKNKLLNDQ
CCCHHHEEEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHH
YVKKTLTLAYFTTYLPEIKEKINLEVKESLSKEERCLIKKYSNICENFENDVYEGGIIDV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
RALEETKLKKMNIKTDLEEKGLYKNGKLLENLKKSLEIQNRIFESISVEIPIKKISKDLF
EEHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MYYLLKSPDERSRSHMFSSILVTPSTSQLKWLDIEEIEPKKILDLKFMFEKELPKYEISL
HHHHHCCCCHHHHHHHHHHHEECCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEE
KNIGGVSIYLLYGMEKALEYGFEKTGIEDILKLIAVIEDIKENLKGKIDLKVLEKYCKIK
ECCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KEKTKSFLNALGKL
HHHHHHHHHHHCCC
>Mature Secondary Structure
MDSSVLIQQCNEFLDGLSNFGDNFKKPFLEKENSVNELQKSLECNLCILENLREKMELQG
CCCHHHHHHHHHHHHHHHHHCCHHHCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC
FETPYIGVGQIKGGEDDDIYEIINYSSYLRRMVDEKKGSLERAKYAIVSHKIAIGNLLDE
CCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
FGNKDILQNLPYNGSYKEHLSKIPPLFFKSYKNILSAFESEGFSKLRSSKIKGLEHAYPE
HCCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
KGVVSSITLSLVIIENGKRKFKRVKIEEEDYEGYIKRTYGDAIITSVKKNYSKNKLLNDQ
CCCHHHEEEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHH
YVKKTLTLAYFTTYLPEIKEKINLEVKESLSKEERCLIKKYSNICENFENDVYEGGIIDV
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
RALEETKLKKMNIKTDLEEKGLYKNGKLLENLKKSLEIQNRIFESISVEIPIKKISKDLF
EEHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MYYLLKSPDERSRSHMFSSILVTPSTSQLKWLDIEEIEPKKILDLKFMFEKELPKYEISL
HHHHHCCCCHHHHHHHHHHHEECCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEE
KNIGGVSIYLLYGMEKALEYGFEKTGIEDILKLIAVIEDIKENLKGKIDLKVLEKYCKIK
ECCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KEKTKSFLNALGKL
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]