| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is dgkA [H]
Identifier: 150396811
GI number: 150396811
Start: 1698534
End: 1699016
Strand: Reverse
Name: dgkA [H]
Synonym: Smed_1602
Alternate gene names: 150396811
Gene position: 1699016-1698534 (Counterclockwise)
Preceding gene: 150396812
Following gene: 150396808
Centisome position: 44.92
GC content: 59.63
Gene sequence:
>483_bases ATGGTGCCGCCTTGGATTCGCCTTAATCGGAACGTCGAAGCTGTTCGCTTTCTCAACTCGCGAGACGAAATGGACGCCAA GAACACCAACCCCCGCAAAGGCGCTGCCGGGCCGGTTACCAAGCATACCGGATTTCGGCACCTGTTTGCTGCGGCCAGCT ACTCCTTCGGCGGTGCCAGGCGTCTGATCGGAGAGGCGGCATTCCGCCACGAACTCATCGCCTTTGCCGTCGCGATGGCC GCGTTCGCGACCGTCGGCGCGAACCTGTTCCAATATGTCGCCATGGCGATCCTGTTTCTGCTGATGATGGCCTTCGAAGC GATTAATACCGCGATTGAGGAGATCGTCGATCGCGTCTCGCCGGAGATCTCCGAGATGGGCAGGAACGCCAAGGATCTCG GCTCCTTCGCCTGCCTCTGCCTCATTCTCGCCAATGCGGGCTATGCCGTTTACGTGATATTTCTCGCCCGGTTGCTAGGC TGA
Upstream 100 bases:
>100_bases CTTTGCGCAGGCTGGCGTCAGTAACAAGGTGTAGCATAGGGAGTAGGCCCGAGACGCGTTACCCGTTTGCTGTCGATTGC CCGGCCTGCATGCTATCCTC
Downstream 100 bases:
>100_bases TCAGGAAGGGTTTTCCAGCCCAACGCTTTGGACTGGCTGGCAACTGTGTTTGTCAGGTGGTTCGTCGGAAGGTTGTTTTG TCCCTGATGATGGCGTTTGC
Product: diacylglycerol kinase
Products: NA
Alternate protein names: DAGK; Diglyceride kinase; DGK [H]
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MVPPWIRLNRNVEAVRFLNSRDEMDAKNTNPRKGAAGPVTKHTGFRHLFAAASYSFGGARRLIGEAAFRHELIAFAVAMA AFATVGANLFQYVAMAILFLLMMAFEAINTAIEEIVDRVSPEISEMGRNAKDLGSFACLCLILANAGYAVYVIFLARLLG
Sequences:
>Translated_160_residues MVPPWIRLNRNVEAVRFLNSRDEMDAKNTNPRKGAAGPVTKHTGFRHLFAAASYSFGGARRLIGEAAFRHELIAFAVAMA AFATVGANLFQYVAMAILFLLMMAFEAINTAIEEIVDRVSPEISEMGRNAKDLGSFACLCLILANAGYAVYVIFLARLLG >Mature_160_residues MVPPWIRLNRNVEAVRFLNSRDEMDAKNTNPRKGAAGPVTKHTGFRHLFAAASYSFGGARRLIGEAAFRHELIAFAVAMA AFATVGANLFQYVAMAILFLLMMAFEAINTAIEEIVDRVSPEISEMGRNAKDLGSFACLCLILANAGYAVYVIFLARLLG
Specific function: Recycling of diacylglycerol produced during cyclic beta- 1,2-glucan biosynthesis [H]
COG id: COG0818
COG function: function code M; Diacylglycerol kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial diacylglycerol kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790475, Length=102, Percent_Identity=38.2352941176471, Blast_Score=64, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000829 [H]
Pfam domain/function: PF01219 DAGK_prokar [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 17488; Mature: 17488
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS01069 DAGK_PROKAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPPWIRLNRNVEAVRFLNSRDEMDAKNTNPRKGAAGPVTKHTGFRHLFAAASYSFGGAR CCCCCCEECCCHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH RLIGEAAFRHELIAFAVAMAAFATVGANLFQYVAMAILFLLMMAFEAINTAIEEIVDRVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PEISEMGRNAKDLGSFACLCLILANAGYAVYVIFLARLLG HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC >Mature Secondary Structure MVPPWIRLNRNVEAVRFLNSRDEMDAKNTNPRKGAAGPVTKHTGFRHLFAAASYSFGGAR CCCCCCEECCCHHHHHHHHCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHH RLIGEAAFRHELIAFAVAMAAFATVGANLFQYVAMAILFLLMMAFEAINTAIEEIVDRVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PEISEMGRNAKDLGSFACLCLILANAGYAVYVIFLARLLG HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1335301; 11481430 [H]