Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is 148653580

Identifier: 148653580

GI number: 148653580

Start: 2210420

End: 2211934

Strand: Direct

Name: 148653580

Synonym: PsycPRwf_1783

Alternate gene names: NA

Gene position: 2210420-2211934 (Clockwise)

Preceding gene: 148653579

Following gene: 148653583

Centisome position: 74.2

GC content: 49.44

Gene sequence:

>1515_bases
ATGAAAGCACATGTGCCGCCTTTTTTATCTGTTAAACCGGCTTTACTTACCACCGCCTTGTTGGCCACATTCACCATGGG
CGCCGCTTTTGCTCAAGCTGCCACAGAGATGCCCAGCGGTGAGCATGCCAGCGCTGATGTGGACATCACGCAGCCAATCA
AAGCCATCGATAAGCTTGAGAGCTTAAAAAACGAGCAAAAGCTTAGCCTATCCATTCCCAAGTTTCAGCACTTCACCACC
AGTAACGGTGTCCCTGTGATATTCGTCCAGACCAAGCAGCTGCCCATTGTCGATGTGGATTTGCGCTTTAACGCAGGCAG
TGCCCGTGATGAGAGTATTCGCAAACAAGGCTTTGGGCTGGCCAGCATGGTCGCCGACTTACTCACCAAAGGCACCAGAG
ATCTTGATGAGACGGCATTCGCTGAAGCGACTGAGCAGCTTGGGATTGAGCTATCCAGCGCCGCTTACAAAGACCAATTT
GTGGTAAATTTGCGCAGCTTATCTGACGCTGAGCATCTAGACCCTGCCTTGTCCTTGATGAGCAGTATAATCACCCAGCC
GCGCTTTGATGCGCAAGTGCTCGAGCGCAGTAAGGCCCAGCAAGTACTGGCGCTCAAACAAATGATGCAAAACCCCTCCT
ATTTAGCCAGTACCACCTTTAGCCAGACCCTGTACGGCTCGCATCCTTATGCCCATTCCCCTTATGGCACGCAGCAAAGC
ATTCCTGCTTTGACCCGTAATGATTTACAGAAGTTTCATGACACCTACTTTGTGGCGCAAAACGCCACTTTAAGTCTTAC
TGGAGATCTAAGCTTATCGCAGGCAAAACAGGCAGCAGAAGCCATTACCCAAGCACTGCCTCAAGGTAAGCCGGCGCCCA
AATTACCCAATCCTACCCCCATTAAACAAAGCAAGTGGGTGCATGTCGATTATGACAGCGACCAAACCTCAGTGATGATC
GGTCAACAAGGCTATCGCATAGACCCTAGTGCCAAGGGCATACAGCGTGGCACTGACTTTAGTATAGGTAATGAAGTGCT
CGCCGGTAGTGGCTTTAGCTCACGCCTCATGGGTAAAGTGCGCAAGGAGCTTGGTTATACCTATGGTATTTATGGCAGTA
TGACCCCGATGCAAGCACCAGGCCCTTATACCATCCGTTTCTCAACCCGTAATGAAAAAGCCGATGAGGCCATCGCCGCT
ACATTACAGACGGTCAATGACACCTTAAAACAAGGCATCACCGCTCAAGAATTTAAACTGACCCAAGAGAGTCTGATTAA
CAGCTATCCGATGGGCTTTGCCAGTAATGCCGGTATCAACGGTATGCTGGGTGTGCTTAATTTTAATAAGCTGCCTGACT
CGTATATTACTGACTACATCAATAGAGTCGAAGGTGCACGTATCGACCAGGTCAATACTGCCCTACGTGACACCCTGACC
CCAGATAAATTTATCATCGTCACTGTGGGCAAGCCCGACATTGCAAAAAAATCACAACTACAAAAGCTTAAGTAG

Upstream 100 bases:

>100_bases
AAAACCGCTAATTATGCGCCAATAAACGCCAGACCAATTGCCATTGACCACCAATAAAACACCCTTTTTAAAAATATAAA
ACCTAATTACGGATTTTGTT

Downstream 100 bases:

>100_bases
AGTACTGCCTTTTATTGGCGCTCTTTATATATCTAAGCGCAAAAAAAAGACACCCGCTTTACGTGGGTGTCTTTTTTTGT
GGGTAGGCTGCTTAAATGGT

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MKAHVPPFLSVKPALLTTALLATFTMGAAFAQAATEMPSGEHASADVDITQPIKAIDKLESLKNEQKLSLSIPKFQHFTT
SNGVPVIFVQTKQLPIVDVDLRFNAGSARDESIRKQGFGLASMVADLLTKGTRDLDETAFAEATEQLGIELSSAAYKDQF
VVNLRSLSDAEHLDPALSLMSSIITQPRFDAQVLERSKAQQVLALKQMMQNPSYLASTTFSQTLYGSHPYAHSPYGTQQS
IPALTRNDLQKFHDTYFVAQNATLSLTGDLSLSQAKQAAEAITQALPQGKPAPKLPNPTPIKQSKWVHVDYDSDQTSVMI
GQQGYRIDPSAKGIQRGTDFSIGNEVLAGSGFSSRLMGKVRKELGYTYGIYGSMTPMQAPGPYTIRFSTRNEKADEAIAA
TLQTVNDTLKQGITAQEFKLTQESLINSYPMGFASNAGINGMLGVLNFNKLPDSYITDYINRVEGARIDQVNTALRDTLT
PDKFIIVTVGKPDIAKKSQLQKLK

Sequences:

>Translated_504_residues
MKAHVPPFLSVKPALLTTALLATFTMGAAFAQAATEMPSGEHASADVDITQPIKAIDKLESLKNEQKLSLSIPKFQHFTT
SNGVPVIFVQTKQLPIVDVDLRFNAGSARDESIRKQGFGLASMVADLLTKGTRDLDETAFAEATEQLGIELSSAAYKDQF
VVNLRSLSDAEHLDPALSLMSSIITQPRFDAQVLERSKAQQVLALKQMMQNPSYLASTTFSQTLYGSHPYAHSPYGTQQS
IPALTRNDLQKFHDTYFVAQNATLSLTGDLSLSQAKQAAEAITQALPQGKPAPKLPNPTPIKQSKWVHVDYDSDQTSVMI
GQQGYRIDPSAKGIQRGTDFSIGNEVLAGSGFSSRLMGKVRKELGYTYGIYGSMTPMQAPGPYTIRFSTRNEKADEAIAA
TLQTVNDTLKQGITAQEFKLTQESLINSYPMGFASNAGINGMLGVLNFNKLPDSYITDYINRVEGARIDQVNTALRDTLT
PDKFIIVTVGKPDIAKKSQLQKLK
>Mature_504_residues
MKAHVPPFLSVKPALLTTALLATFTMGAAFAQAATEMPSGEHASADVDITQPIKAIDKLESLKNEQKLSLSIPKFQHFTT
SNGVPVIFVQTKQLPIVDVDLRFNAGSARDESIRKQGFGLASMVADLLTKGTRDLDETAFAEATEQLGIELSSAAYKDQF
VVNLRSLSDAEHLDPALSLMSSIITQPRFDAQVLERSKAQQVLALKQMMQNPSYLASTTFSQTLYGSHPYAHSPYGTQQS
IPALTRNDLQKFHDTYFVAQNATLSLTGDLSLSQAKQAAEAITQALPQGKPAPKLPNPTPIKQSKWVHVDYDSDQTSVMI
GQQGYRIDPSAKGIQRGTDFSIGNEVLAGSGFSSRLMGKVRKELGYTYGIYGSMTPMQAPGPYTIRFSTRNEKADEAIAA
TLQTVNDTLKQGITAQEFKLTQESLINSYPMGFASNAGINGMLGVLNFNKLPDSYITDYINRVEGARIDQVNTALRDTLT
PDKFIIVTVGKPDIAKKSQLQKLK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 54936; Mature: 54936

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAHVPPFLSVKPALLTTALLATFTMGAAFAQAATEMPSGEHASADVDITQPIKAIDKLE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
SLKNEQKLSLSIPKFQHFTTSNGVPVIFVQTKQLPIVDVDLRFNAGSARDESIRKQGFGL
HHCCCCEEEEECCCHHCEECCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHCCCH
ASMVADLLTKGTRDLDETAFAEATEQLGIELSSAAYKDQFVVNLRSLSDAEHLDPALSLM
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHEEEHHHCCCHHHCCHHHHHH
SSIITQPRFDAQVLERSKAQQVLALKQMMQNPSYLASTTFSQTLYGSHPYAHSPYGTQQS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
IPALTRNDLQKFHDTYFVAQNATLSLTGDLSLSQAKQAAEAITQALPQGKPAPKLPNPTP
CCHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IKQSKWVHVDYDSDQTSVMIGQQGYRIDPSAKGIQRGTDFSIGNEVLAGSGFSSRLMGKV
CCCCCEEEEEECCCCCEEEECCCCCEECCCCCHHCCCCCCCCCCHHEECCCHHHHHHHHH
RKELGYTYGIYGSMTPMQAPGPYTIRFSTRNEKADEAIAATLQTVNDTLKQGITAQEFKL
HHHHCCEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TQESLINSYPMGFASNAGINGMLGVLNFNKLPDSYITDYINRVEGARIDQVNTALRDTLT
HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC
PDKFIIVTVGKPDIAKKSQLQKLK
CCCEEEEECCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKAHVPPFLSVKPALLTTALLATFTMGAAFAQAATEMPSGEHASADVDITQPIKAIDKLE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
SLKNEQKLSLSIPKFQHFTTSNGVPVIFVQTKQLPIVDVDLRFNAGSARDESIRKQGFGL
HHCCCCEEEEECCCHHCEECCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHCCCH
ASMVADLLTKGTRDLDETAFAEATEQLGIELSSAAYKDQFVVNLRSLSDAEHLDPALSLM
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHEEEHHHCCCHHHCCHHHHHH
SSIITQPRFDAQVLERSKAQQVLALKQMMQNPSYLASTTFSQTLYGSHPYAHSPYGTQQS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
IPALTRNDLQKFHDTYFVAQNATLSLTGDLSLSQAKQAAEAITQALPQGKPAPKLPNPTP
CCHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IKQSKWVHVDYDSDQTSVMIGQQGYRIDPSAKGIQRGTDFSIGNEVLAGSGFSSRLMGKV
CCCCCEEEEEECCCCCEEEECCCCCEECCCCCHHCCCCCCCCCCHHEECCCHHHHHHHHH
RKELGYTYGIYGSMTPMQAPGPYTIRFSTRNEKADEAIAATLQTVNDTLKQGITAQEFKL
HHHHCCEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TQESLINSYPMGFASNAGINGMLGVLNFNKLPDSYITDYINRVEGARIDQVNTALRDTLT
HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC
PDKFIIVTVGKPDIAKKSQLQKLK
CCCEEEEECCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]