| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is mutL [H]
Identifier: 148652628
GI number: 148652628
Start: 972509
End: 974461
Strand: Direct
Name: mutL [H]
Synonym: PsycPRwf_0819
Alternate gene names: 148652628
Gene position: 972509-974461 (Clockwise)
Preceding gene: 148652627
Following gene: 148652629
Centisome position: 32.65
GC content: 49.77
Gene sequence:
>1953_bases ATGATGTTTCGCCGTAACCCGCTCGATGGCTTAGCCGACACTGGCCTACAGGTCAGCACTCAGGCTCAGCATAGTAATCG CATAAAAAAACTGCCGCCTTTATTGGTCAATCAGCTGGCAGCAGGCGAGGTGGTGACTCGGCCTGCCTCAGTGGTCAAAG AGCTGATTGAAAATGCGCTCGATGCTGGCGCGCGCCAAATTGATGTGCGCATTACTCAAGGCGGTATGGGCATTATTGAG GTGGCCGATGATGGCTGCGGCATTCATCCTGAGGATATGGTAATGGCGGTGACCCGCTTTGCCACCAGTAAAATCGCTGA TGTGGCGCATTTGCAAGGCATAGCCACTTTAGGGTTTCGTGGTGAAGCACTGGCCGCTACAGCCGCTGTGTCCCGACTGA CCTTAACCAGCTGCTGTGATGACAGCGGTATTGGCCGACAGCTTAATGTGGCCGGTATTTTAGAGGACACGCCGCAATTG GTGCCGGTAGTGCATCGCCGTGGCACCACAGTAAGCGTAAAGGACTTGTATTTTAATGTGCCGGCAAGACGTGGCAATCT AAAGGCCATCTCGACTGAGTTTATGCACATCGAGACGGTGGTCAAACAGTTGGCATTGGTAGCAAGTGATGTCAGCTTTA GCCTTTGGCATAATGACAAACGTCGTTTTAATTTTGCCGCCATCAATGCCGAGCCGTCATCGCCGTTAACCGTATCTTCG TCTAACCTTGCCTCAGAAGCCTTATCTACCCAAGTGATGCAAGCCTTGCTGACACGATTAAAATCGGTGCTACCCCCAAG TCATGAGCAAGCAAGTTTATTACATGACAACAACTTGCAGGTGTTATCCTTAGATTTAGAGGCGCTGCGTGTGCAATATG AGGGCATGCGCGGCATCAACCGCAGCCAAGAGCCACTAGGCATTGAAGGGCTGATAATTCCAAGTACAAAGGCACTGGCC AATCATCCTTATAAGCTGATTTATATCAATGGTCGCTTGGTCAAAGACAAGCGTATTGCCCAGAGCCTACGTGAGAGCAT TAATGGCTTTGATCACATTGCCAGCCTAGGCTACGTGCTGTTTTTTAATCTGCCCAAGGCGTGGCTAAATCTTAATGTGC ATCCCTCGAAGCTGTGCATAAAAATCCAAAATCTGGCCAATGTCATGGCGCACTTTGAGGTGGGCGTGCGTGAGGCCTTG CAGCGTTGGCAGAAGCGTCAGCCGATAATACAGCCGATAGTGCAGCCGCCGCAATACCAGATCAACGCCCAAGCATCAGT GCAAGTGGCGCAGTCCCACTCTCACCAGATATCTGTCAGCCAAGGCTCTAAGCGGATTGCACCATCTAATCACATAGACT ACCCGCACAATAGCAGTGCTACAGCGTCTGAGACGACAGTACCTCAGTTAAAACAGCCGGTACAGACAAATGAGTCGATA GCCTATTATCAGACACAGGGCCACCACGGCCAGTATACGCAAAGCCACCCCCATGTCGTCTCTGATTCACGCTTATCAGG TTTTGACACTGTAACAGACTTGCCTCCTGTGTCTTTTACCCAAAAAGATGGCCCAGTGCAGTGCTTATATTTGTTAAAGG ACAGTCTGTTGAATGAGAGTCTGTTGAGTGACAGTCTTTTAAGTGATCAGCAGCTGGCGTTATTACAAATACAGCACACC CTGTATGTCTTTTTAGAGACTGAGTTGATACGGTGGCTACAGGCTAGCTTCTGTACGCTGCTAGAGGACGAATGGCAGAG ACACTATAAAGACTATCAAGCCTGCGTGAGTCAAGGGCAAAAACTAGCCTGGATAAACACCCAGCTACAAAACCTAGCTA AAGCGGCTCAAAACCAATGGAAGCAGCCTTGGAGCAAGCAATTGGCCGACCAAGCGCTTGGCGAGCTGCCTTTATCGCAG CTGATTCAATTAATACTAAAAAACGACCCGTAA
Upstream 100 bases:
>100_bases TGACTTGATCTTTTGCAGTGATTTGGTTGCTCATATCCTTAATTATTTGCCCTAATTTATTTGTCCTCATTTATTTATCG TCCAGCTTTGAGCTTTATAC
Downstream 100 bases:
>100_bases AATCAGTTAGGTTTATGACAGTGTCCAAGCCGTTTATAACCGCTAATCCAATCAAAAAAAACCATAACCATAAGAGTAGA TACCATGGGTGATGTTGATA
Product: ATPase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 650; Mature: 650
Protein sequence:
>650_residues MMFRRNPLDGLADTGLQVSTQAQHSNRIKKLPPLLVNQLAAGEVVTRPASVVKELIENALDAGARQIDVRITQGGMGIIE VADDGCGIHPEDMVMAVTRFATSKIADVAHLQGIATLGFRGEALAATAAVSRLTLTSCCDDSGIGRQLNVAGILEDTPQL VPVVHRRGTTVSVKDLYFNVPARRGNLKAISTEFMHIETVVKQLALVASDVSFSLWHNDKRRFNFAAINAEPSSPLTVSS SNLASEALSTQVMQALLTRLKSVLPPSHEQASLLHDNNLQVLSLDLEALRVQYEGMRGINRSQEPLGIEGLIIPSTKALA NHPYKLIYINGRLVKDKRIAQSLRESINGFDHIASLGYVLFFNLPKAWLNLNVHPSKLCIKIQNLANVMAHFEVGVREAL QRWQKRQPIIQPIVQPPQYQINAQASVQVAQSHSHQISVSQGSKRIAPSNHIDYPHNSSATASETTVPQLKQPVQTNESI AYYQTQGHHGQYTQSHPHVVSDSRLSGFDTVTDLPPVSFTQKDGPVQCLYLLKDSLLNESLLSDSLLSDQQLALLQIQHT LYVFLETELIRWLQASFCTLLEDEWQRHYKDYQACVSQGQKLAWINTQLQNLAKAAQNQWKQPWSKQLADQALGELPLSQ LIQLILKNDP
Sequences:
>Translated_650_residues MMFRRNPLDGLADTGLQVSTQAQHSNRIKKLPPLLVNQLAAGEVVTRPASVVKELIENALDAGARQIDVRITQGGMGIIE VADDGCGIHPEDMVMAVTRFATSKIADVAHLQGIATLGFRGEALAATAAVSRLTLTSCCDDSGIGRQLNVAGILEDTPQL VPVVHRRGTTVSVKDLYFNVPARRGNLKAISTEFMHIETVVKQLALVASDVSFSLWHNDKRRFNFAAINAEPSSPLTVSS SNLASEALSTQVMQALLTRLKSVLPPSHEQASLLHDNNLQVLSLDLEALRVQYEGMRGINRSQEPLGIEGLIIPSTKALA NHPYKLIYINGRLVKDKRIAQSLRESINGFDHIASLGYVLFFNLPKAWLNLNVHPSKLCIKIQNLANVMAHFEVGVREAL QRWQKRQPIIQPIVQPPQYQINAQASVQVAQSHSHQISVSQGSKRIAPSNHIDYPHNSSATASETTVPQLKQPVQTNESI AYYQTQGHHGQYTQSHPHVVSDSRLSGFDTVTDLPPVSFTQKDGPVQCLYLLKDSLLNESLLSDSLLSDQQLALLQIQHT LYVFLETELIRWLQASFCTLLEDEWQRHYKDYQACVSQGQKLAWINTQLQNLAKAAQNQWKQPWSKQLADQALGELPLSQ LIQLILKNDP >Mature_650_residues MMFRRNPLDGLADTGLQVSTQAQHSNRIKKLPPLLVNQLAAGEVVTRPASVVKELIENALDAGARQIDVRITQGGMGIIE VADDGCGIHPEDMVMAVTRFATSKIADVAHLQGIATLGFRGEALAATAAVSRLTLTSCCDDSGIGRQLNVAGILEDTPQL VPVVHRRGTTVSVKDLYFNVPARRGNLKAISTEFMHIETVVKQLALVASDVSFSLWHNDKRRFNFAAINAEPSSPLTVSS SNLASEALSTQVMQALLTRLKSVLPPSHEQASLLHDNNLQVLSLDLEALRVQYEGMRGINRSQEPLGIEGLIIPSTKALA NHPYKLIYINGRLVKDKRIAQSLRESINGFDHIASLGYVLFFNLPKAWLNLNVHPSKLCIKIQNLANVMAHFEVGVREAL QRWQKRQPIIQPIVQPPQYQINAQASVQVAQSHSHQISVSQGSKRIAPSNHIDYPHNSSATASETTVPQLKQPVQTNESI AYYQTQGHHGQYTQSHPHVVSDSRLSGFDTVTDLPPVSFTQKDGPVQCLYLLKDSLLNESLLSDSLLSDQQLALLQIQHT LYVFLETELIRWLQASFCTLLEDEWQRHYKDYQACVSQGQKLAWINTQLQNLAKAAQNQWKQPWSKQLADQALGELPLSQ LIQLILKNDP
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=189, Percent_Identity=38.6243386243386, Blast_Score=141, Evalue=3e-33, Organism=Homo sapiens, GI4505913, Length=200, Percent_Identity=34, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI310128478, Length=203, Percent_Identity=33.4975369458128, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI4505911, Length=197, Percent_Identity=32.48730964467, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI189458896, Length=197, Percent_Identity=32.48730964467, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI189458898, Length=197, Percent_Identity=32.994923857868, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI310128480, Length=145, Percent_Identity=32.4137931034483, Blast_Score=84, Evalue=6e-16, Organism=Escherichia coli, GI1790612, Length=421, Percent_Identity=33.4916864608076, Blast_Score=200, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71991825, Length=412, Percent_Identity=28.1553398058252, Blast_Score=142, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17562796, Length=374, Percent_Identity=23.7967914438503, Blast_Score=104, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6323819, Length=189, Percent_Identity=37.5661375661376, Blast_Score=144, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6324247, Length=454, Percent_Identity=23.7885462555066, Blast_Score=113, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6325093, Length=328, Percent_Identity=26.5243902439024, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323063, Length=108, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI17136968, Length=356, Percent_Identity=30.6179775280899, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI17136970, Length=190, Percent_Identity=31.0526315789474, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 71970; Mature: 71970
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFRRNPLDGLADTGLQVSTQAQHSNRIKKLPPLLVNQLAAGEVVTRPASVVKELIENAL CCCCCCCCCCHHCCCCEEEECHHHHCHHHHCCHHHHHHHHCCHHHCCCHHHHHHHHHHHH DAGARQIDVRITQGGMGIIEVADDGCGIHPEDMVMAVTRFATSKIADVAHLQGIATLGFR HCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GEALAATAAVSRLTLTSCCDDSGIGRQLNVAGILEDTPQLVPVVHRRGTTVSVKDLYFNV CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCEEEEEHEEEEC PARRGNLKAISTEFMHIETVVKQLALVASDVSFSLWHNDKRRFNFAAINAEPSSPLTVSS CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEECCCCCCEEECC SNLASEALSTQVMQALLTRLKSVLPPSHEQASLLHDNNLQVLSLDLEALRVQYEGMRGIN CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCEEEEEECHHHHHHHHHHCCCCC RSQEPLGIEGLIIPSTKALANHPYKLIYINGRLVKDKRIAQSLRESINGFDHIASLGYVL CCCCCCCCCEEEECCCHHHHCCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHE FFNLPKAWLNLNVHPSKLCIKIQNLANVMAHFEVGVREALQRWQKRQPIIQPIVQPPQYQ EEECCHHHEECCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEE INAQASVQVAQSHSHQISVSQGSKRIAPSNHIDYPHNSSATASETTVPQLKQPVQTNESI ECCCHHEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCE AYYQTQGHHGQYTQSHPHVVSDSRLSGFDTVTDLPPVSFTQKDGPVQCLYLLKDSLLNES EEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LLSDSLLSDQQLALLQIQHTLYVFLETELIRWLQASFCTLLEDEWQRHYKDYQACVSQGQ HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KLAWINTQLQNLAKAAQNQWKQPWSKQLADQALGELPLSQLIQLILKNDP EEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure MMFRRNPLDGLADTGLQVSTQAQHSNRIKKLPPLLVNQLAAGEVVTRPASVVKELIENAL CCCCCCCCCCHHCCCCEEEECHHHHCHHHHCCHHHHHHHHCCHHHCCCHHHHHHHHHHHH DAGARQIDVRITQGGMGIIEVADDGCGIHPEDMVMAVTRFATSKIADVAHLQGIATLGFR HCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GEALAATAAVSRLTLTSCCDDSGIGRQLNVAGILEDTPQLVPVVHRRGTTVSVKDLYFNV CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCEEEEEHEEEEC PARRGNLKAISTEFMHIETVVKQLALVASDVSFSLWHNDKRRFNFAAINAEPSSPLTVSS CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEECCCCCCEEECC SNLASEALSTQVMQALLTRLKSVLPPSHEQASLLHDNNLQVLSLDLEALRVQYEGMRGIN CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCEEEEEECHHHHHHHHHHCCCCC RSQEPLGIEGLIIPSTKALANHPYKLIYINGRLVKDKRIAQSLRESINGFDHIASLGYVL CCCCCCCCCEEEECCCHHHHCCCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHE FFNLPKAWLNLNVHPSKLCIKIQNLANVMAHFEVGVREALQRWQKRQPIIQPIVQPPQYQ EEECCHHHEECCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEE INAQASVQVAQSHSHQISVSQGSKRIAPSNHIDYPHNSSATASETTVPQLKQPVQTNESI ECCCHHEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCE AYYQTQGHHGQYTQSHPHVVSDSRLSGFDTVTDLPPVSFTQKDGPVQCLYLLKDSLLNES EEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LLSDSLLSDQQLALLQIQHTLYVFLETELIRWLQASFCTLLEDEWQRHYKDYQACVSQGQ HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KLAWINTQLQNLAKAAQNQWKQPWSKQLADQALGELPLSQLIQLILKNDP EEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA