| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is yjeE [H]
Identifier: 148652627
GI number: 148652627
Start: 971923
End: 972408
Strand: Direct
Name: yjeE [H]
Synonym: PsycPRwf_0818
Alternate gene names: 148652627
Gene position: 971923-972408 (Clockwise)
Preceding gene: 148652626
Following gene: 148652628
Centisome position: 32.63
GC content: 51.65
Gene sequence:
>486_bases ATGACGCGCCGCAATGTACAGCTTACGCTAACCTCTGAGAGCGATACTCAGGCCTTGGCCAAACAGTTGGCCCAAGCCCA CATCAAAGGCAGTGTCTGGCTATCAGGAGATCTGGGTGCCGGAAAGACCACTTTAACTCGCTACTGGCTGCGTGCCCTAG GCCATGAGGGCGCGGTAAAAAGCCCGACCTATACTTTGGTTGAGCCTTATGAGCTAAAAAATAGCACGAATGTGGCGGTT GATCGGGTATATCATGCCGACTTGTATCGTCTACAAGACCCAGAAGAGCTGTCATTTATAGGCTTTGAAGAGTATTTGGA GGATGAGCGGGCGTTGGTAATTATCGAATGGGCCAGCCGTGCTGAGGCGTATTTGCCGCCACCGGTAATGACAGTCACCC TTACTGTGGTCAGTGATGAGCAAGGCACACGCCGAGAGGTGAGCGTGGACTTTGATGACGCTATTGATTTTGTTGCCCCA GATTAA
Upstream 100 bases:
>100_bases CTTTTATAAACCCTGAAGTGGCACTGCAAGTAAAATAATAATCAGCAGCTGATAACCAGTCATCAACCTATGGGCTACAA AGAGAATAAAAGGAGTGCCA
Downstream 100 bases:
>100_bases TGACTTGATCTTTTGCAGTGATTTGGTTGCTCATATCCTTAATTATTTGCCCTAATTTATTTGTCCTCATTTATTTATCG TCCAGCTTTGAGCTTTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTRRNVQLTLTSESDTQALAKQLAQAHIKGSVWLSGDLGAGKTTLTRYWLRALGHEGAVKSPTYTLVEPYELKNSTNVAV DRVYHADLYRLQDPEELSFIGFEEYLEDERALVIIEWASRAEAYLPPPVMTVTLTVVSDEQGTRREVSVDFDDAIDFVAP D
Sequences:
>Translated_161_residues MTRRNVQLTLTSESDTQALAKQLAQAHIKGSVWLSGDLGAGKTTLTRYWLRALGHEGAVKSPTYTLVEPYELKNSTNVAV DRVYHADLYRLQDPEELSFIGFEEYLEDERALVIIEWASRAEAYLPPPVMTVTLTVVSDEQGTRREVSVDFDDAIDFVAP D >Mature_160_residues TRRNVQLTLTSESDTQALAKQLAQAHIKGSVWLSGDLGAGKTTLTRYWLRALGHEGAVKSPTYTLVEPYELKNSTNVAVD RVYHADLYRLQDPEELSFIGFEEYLEDERALVIIEWASRAEAYLPPPVMTVTLTVVSDEQGTRREVSVDFDDAIDFVAPD
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=146, Percent_Identity=45.2054794520548, Blast_Score=115, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 18062; Mature: 17931
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRNVQLTLTSESDTQALAKQLAQAHIKGSVWLSGDLGAGKTTLTRYWLRALGHEGAVK CCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC SPTYTLVEPYELKNSTNVAVDRVYHADLYRLQDPEELSFIGFEEYLEDERALVIIEWASR CCCEEEECCEECCCCCCEEEEEEEECHHEECCCCCCCEEECHHHHHCCCCEEEEEEECCC AEAYLPPPVMTVTLTVVSDEQGTRREVSVDFDDAIDFVAPD CCCCCCCCEEEEEEEEEECCCCCCEEEEECHHHCCCCCCCC >Mature Secondary Structure TRRNVQLTLTSESDTQALAKQLAQAHIKGSVWLSGDLGAGKTTLTRYWLRALGHEGAVK CCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCC SPTYTLVEPYELKNSTNVAVDRVYHADLYRLQDPEELSFIGFEEYLEDERALVIIEWASR CCCEEEECCEECCCCCCEEEEEEEECHHEECCCCCCCEEECHHHHHCCCCEEEEEEECCC AEAYLPPPVMTVTLTVVSDEQGTRREVSVDFDDAIDFVAPD CCCCCCCCEEEEEEEEEECCCCCCEEEEECHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]