| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302719
Identifier: 146302719
GI number: 146302719
Start: 6028554
End: 6029741
Strand: Reverse
Name: 146302719
Synonym: Fjoh_4992
Alternate gene names: NA
Gene position: 6029741-6028554 (Counterclockwise)
Preceding gene: 146302721
Following gene: 146302717
Centisome position: 98.9
GC content: 34.43
Gene sequence:
>1188_bases ATGAAAATTAAAGAGAATTTATATAATCAAAGGATTATTTCGATTGACGCTTTACGTGGAATTACCATTTTTGTAATGAT ATTTGTAAATGAGCTTGCAAGCATCCAAAATGTACCTCAATGGATGAAACACATGCCTGCAGATGCAGATGCGATGACCT TTGTCGATTTAGTTTTCCCTGCTTTTTTATTTATAGTTGGAATGTCAGTTCCATTTGCATTTAACGCCAGATTAATAAAA GGCGACAGTCCAAAAGTAATCTGGACTCATACCTTAAAACGTGCTTTAGCATTAATCATAATTGGTGTTTATATGGTTAA TTCAAGTGAAGGTTACGACGCCTCAAAAATGATAATAACACCAGCTTTTTGGGGACTTTTAGCTTATTCAATGCCAATTC CTATCTGGAATAAATATCCAAAAGACTTTTCGGTTGTATTAAAATCCATTCTGCAATATGGCGGTATGGTGGTTTTAATT GCACTTTATTTTTTATATGTTCAGGAAGAAACAGGAAAAATAGGAATCACGCCAAAATGGTGGGGAATTCTGGGTTTAAT AGGCTGGGCTTATCTTATTTCAGTAATTTACTATTGGCTGGTTTCGGGAAAATTATGGGCAATGATTGTTTTTCTGATAG TCTGCGTTGTCGGAAATTCAGCAAACCTGACCCCAGGTGTAAATATGCCGGAATGGCTGGGATTTATTGCAGGCCATTTA ACCCATGCTACATTAGTATCAGCCGGAATCGTAATTTCGCTTTTGTTTTTTGATAGAAAAATCGAAAACAAAATCAATTG GCCGGTAATAGGTTTTATAATTTTGTTTTTTGCCGCTGGATTTTTTCTGCGTCAATATTATGGAATTTCAAAAATACATG GAACTCCTGCATGGACACTAATTTCTGCTGGAATCTGCACCGTTCTGTTTTACTTTTTGTATTGGTTAATGGAAGTTAAA AAACAAACTAAATGGAGTGAGTTTTTTATGCCTGCCGCAGCAAATCCGTTATTAATTTATATTCTGCCGGGTGTTATTTA TTATTTCTGCAAAGTTGTCAATCTTCATATAATCCCAGGATATTTTAGAGAAGGCGTTCCTGGAATTCTTTGGTCTTTAG TGTTTTCGATTATAATGCTTTACGTAATGAAAATCTTTAATAGATTTAAAATTCAGCTTCATCTTTAA
Upstream 100 bases:
>100_bases CGTTTTTATTTATGCTTAACAAAATACTTCAAAATAAAATAATGTAACAATGTAACAACATTTCAGAATTATATTATATT TGATAAAAAAGTAATATTTT
Downstream 100 bases:
>100_bases TTTTTAGTCACAGTATTCAGTCTGAGACTGTAAACTGTAAACTGTGACTGAATACTGTAGACTGAGACTGAATACTATTC TATAACAACAGATTTTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MKIKENLYNQRIISIDALRGITIFVMIFVNELASIQNVPQWMKHMPADADAMTFVDLVFPAFLFIVGMSVPFAFNARLIK GDSPKVIWTHTLKRALALIIIGVYMVNSSEGYDASKMIITPAFWGLLAYSMPIPIWNKYPKDFSVVLKSILQYGGMVVLI ALYFLYVQEETGKIGITPKWWGILGLIGWAYLISVIYYWLVSGKLWAMIVFLIVCVVGNSANLTPGVNMPEWLGFIAGHL THATLVSAGIVISLLFFDRKIENKINWPVIGFIILFFAAGFFLRQYYGISKIHGTPAWTLISAGICTVLFYFLYWLMEVK KQTKWSEFFMPAAANPLLIYILPGVIYYFCKVVNLHIIPGYFREGVPGILWSLVFSIIMLYVMKIFNRFKIQLHL
Sequences:
>Translated_395_residues MKIKENLYNQRIISIDALRGITIFVMIFVNELASIQNVPQWMKHMPADADAMTFVDLVFPAFLFIVGMSVPFAFNARLIK GDSPKVIWTHTLKRALALIIIGVYMVNSSEGYDASKMIITPAFWGLLAYSMPIPIWNKYPKDFSVVLKSILQYGGMVVLI ALYFLYVQEETGKIGITPKWWGILGLIGWAYLISVIYYWLVSGKLWAMIVFLIVCVVGNSANLTPGVNMPEWLGFIAGHL THATLVSAGIVISLLFFDRKIENKINWPVIGFIILFFAAGFFLRQYYGISKIHGTPAWTLISAGICTVLFYFLYWLMEVK KQTKWSEFFMPAAANPLLIYILPGVIYYFCKVVNLHIIPGYFREGVPGILWSLVFSIIMLYVMKIFNRFKIQLHL >Mature_395_residues MKIKENLYNQRIISIDALRGITIFVMIFVNELASIQNVPQWMKHMPADADAMTFVDLVFPAFLFIVGMSVPFAFNARLIK GDSPKVIWTHTLKRALALIIIGVYMVNSSEGYDASKMIITPAFWGLLAYSMPIPIWNKYPKDFSVVLKSILQYGGMVVLI ALYFLYVQEETGKIGITPKWWGILGLIGWAYLISVIYYWLVSGKLWAMIVFLIVCVVGNSANLTPGVNMPEWLGFIAGHL THATLVSAGIVISLLFFDRKIENKINWPVIGFIILFFAAGFFLRQYYGISKIHGTPAWTLISAGICTVLFYFLYWLMEVK KQTKWSEFFMPAAANPLLIYILPGVIYYFCKVVNLHIIPGYFREGVPGILWSLVFSIIMLYVMKIFNRFKIQLHL
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45044; Mature: 45044
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKENLYNQRIISIDALRGITIFVMIFVNELASIQNVPQWMKHMPADADAMTFVDLVFP CCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHH AFLFIVGMSVPFAFNARLIKGDSPKVIWTHTLKRALALIIIGVYMVNSSEGYDASKMIIT HHHHHHHCCCCCEECCEEEECCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEH PAFWGLLAYSMPIPIWNKYPKDFSVVLKSILQYGGMVVLIALYFLYVQEETGKIGITPKW HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHH WGILGLIGWAYLISVIYYWLVSGKLWAMIVFLIVCVVGNSANLTPGVNMPEWLGFIAGHL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH THATLVSAGIVISLLFFDRKIENKINWPVIGFIILFFAAGFFLRQYYGISKIHGTPAWTL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH ISAGICTVLFYFLYWLMEVKKQTKWSEFFMPAAANPLLIYILPGVIYYFCKVVNLHIIPG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHEECC YFREGVPGILWSLVFSIIMLYVMKIFNRFKIQLHL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEC >Mature Secondary Structure MKIKENLYNQRIISIDALRGITIFVMIFVNELASIQNVPQWMKHMPADADAMTFVDLVFP CCCHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHH AFLFIVGMSVPFAFNARLIKGDSPKVIWTHTLKRALALIIIGVYMVNSSEGYDASKMIIT HHHHHHHCCCCCEECCEEEECCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEH PAFWGLLAYSMPIPIWNKYPKDFSVVLKSILQYGGMVVLIALYFLYVQEETGKIGITPKW HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHH WGILGLIGWAYLISVIYYWLVSGKLWAMIVFLIVCVVGNSANLTPGVNMPEWLGFIAGHL HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH THATLVSAGIVISLLFFDRKIENKINWPVIGFIILFFAAGFFLRQYYGISKIHGTPAWTL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH ISAGICTVLFYFLYWLMEVKKQTKWSEFFMPAAANPLLIYILPGVIYYFCKVVNLHIIPG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHEECC YFREGVPGILWSLVFSIIMLYVMKIFNRFKIQLHL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA