Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302225

Identifier: 146302225

GI number: 146302225

Start: 5427104

End: 5428921

Strand: Reverse

Name: 146302225

Synonym: Fjoh_4498

Alternate gene names: NA

Gene position: 5428921-5427104 (Counterclockwise)

Preceding gene: 146302226

Following gene: 146302224

Centisome position: 89.04

GC content: 36.08

Gene sequence:

>1818_bases
ATGACAATGTTCATGTATTGTCTAAATGTATATCCCAAAACTGCTATAAACCACAAAACTATGAATAAAAACACACCTTT
AAATTCAGGAATTCAGCCTGATTTAAAAATAGAAACTGCTATTATTGGTGCCGGAACTTCCGGATTATACACCGCATATC
GTTTGGTAACAGATAAAAAATATACCGCAGATCAGGTGCAGATTTTTGACCTGAGCAGTAAACTGGGCGGAAGACTGGAA
TCTGTTATTATGCCGGGAATGGATTTCTGGGGCGAGTTAGGAGGAATGCGCTATCTGACTTCTCAGGAAATCGTAACTAC
TTTAATTGAAGGTTATATATCTCCAAAAGATCCTAAAAAACGTATTCCTGTTTTAAAAGATAAAATGACACCGGTTCCGT
TTCCAATGGGCAAGTCGTCAAAATTACTAATGTATCTTAGAAAAGAACGTTTTAAACAAGATGCGTGGGATGAAGCTCAG
AAAAAAGGTAAAAAACTGCCAACGAGATATTATCTTAATGAGACTGATTTAGGCTTTAGTTCAGACCAGCTTTTTAATAA
AATTATTTATGATGTTTTAATGGCAGATCCCTGGGTTGCTAAAAAATACCAAAAGAAAATCAAAAAAGGACATAATGTAT
ACGACTATACTTTTGAATTAACCAGTGAAGATTGGGATGAAATCAAACCAAGACTGGTTTACAATTTTCCAAAATCTCCT
TATGATAAAAGAAAAGTAAACGATCTGGGTTTCTGGAATTTAATTAAAGATCAGGTTTCGCAGGAAGGATATGAGTTTTT
AGCCAATGCGGGAGGTTATTATTCAAATACCATCAACTGGAATTCTGCCGAAGCTTTTCCTTATATGGTGGGCGATTTTA
CTGCAGGAACAATTTATAAAACCATTGAAGAAGGTTACGACAGTATTGCTTATGCAGTTGCCAATTCTTATATGGAACAC
AAAGGTGCGTGCATTTGGTCAGAAAACAAATTAGAGACTTTTACCAAAGAACATTCTGTAAAAACACATAAATACCAGCT
TACTTTTCTAAATATAAAAACCAACAGCAAATGGCATGTATATGCTAATTCAATTGTTTTGGCTATGCCGAGAAAATCTT
TAGAACTTTTAGACCAGAACAATTTCTTTTTCAATGTGAATGAAAATTCGGTTTTAAATGAAAATATCCGTTCTGTTATT
ATGGAGCCGGCTTTCAAAATATTAATGGGCTTTGAATATCCGTGGTGGAAAGAATTAGGAATAGATTCAGGACATTCGAT
TACCGATTTACCAATGAGACAATGCTACTACTTTGGAACCGATAAAAAAACGAAAAACTCCATGCTTTTAGGAAGCTACG
GCGATATGGAAACCGAAACATTCTGGAAAGCGCTTTCTGATGATAAAGTACTTTTTGAAGTTAAAGCGGCTAAATCGGCT
TCGTTAAAAGAGCTTCACCAGTTAAATGATGTTCAGGCAACAAAACTTATGGTAGACGAATTGATGAATCAGCTTCGCGA
ACTGCATGGTAAAGATGTAACCATACCAGAACCTTATGTAACCTATTTTAAAGACTGGACAGATGAGCCTTTTGGAGCAG
GATATCATGCGTGGAAAGCAGGATTTTCTGTTGGAGATGTCATGAAATATATGAGAAAACCAAAACATGATGAACAGATT
CATATTTGCGGTGAAGCATACTCAGATCAGCAGGGCTGGGTTGAAGGAGCATTTTGTGAGGCAGAGAAAATGCTGCAGGA
TTATTTTGGGCTGAAACGTCCGTTCTGGCTTCCTGACAATTACTATTTAGGATGGTAA

Upstream 100 bases:

>100_bases
TTCAATTTTTCATCCTGTATAAAGCATGTTTTGTGACCAATAATTTCCGCTTTGTGTCATTTTTTGATAATCGATTTTGT
ATCTGCAATAATTTAGACGC

Downstream 100 bases:

>100_bases
AAGGAGAAGTTTTTTGTTAGTAATTCAAATCATTAATTTAAAAAAGTAATAGTATGTTAAAACGTAACGGCTTTGATGAT
GAGTTAAATTTAACTCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 605; Mature: 604

Protein sequence:

>605_residues
MTMFMYCLNVYPKTAINHKTMNKNTPLNSGIQPDLKIETAIIGAGTSGLYTAYRLVTDKKYTADQVQIFDLSSKLGGRLE
SVIMPGMDFWGELGGMRYLTSQEIVTTLIEGYISPKDPKKRIPVLKDKMTPVPFPMGKSSKLLMYLRKERFKQDAWDEAQ
KKGKKLPTRYYLNETDLGFSSDQLFNKIIYDVLMADPWVAKKYQKKIKKGHNVYDYTFELTSEDWDEIKPRLVYNFPKSP
YDKRKVNDLGFWNLIKDQVSQEGYEFLANAGGYYSNTINWNSAEAFPYMVGDFTAGTIYKTIEEGYDSIAYAVANSYMEH
KGACIWSENKLETFTKEHSVKTHKYQLTFLNIKTNSKWHVYANSIVLAMPRKSLELLDQNNFFFNVNENSVLNENIRSVI
MEPAFKILMGFEYPWWKELGIDSGHSITDLPMRQCYYFGTDKKTKNSMLLGSYGDMETETFWKALSDDKVLFEVKAAKSA
SLKELHQLNDVQATKLMVDELMNQLRELHGKDVTIPEPYVTYFKDWTDEPFGAGYHAWKAGFSVGDVMKYMRKPKHDEQI
HICGEAYSDQQGWVEGAFCEAEKMLQDYFGLKRPFWLPDNYYLGW

Sequences:

>Translated_605_residues
MTMFMYCLNVYPKTAINHKTMNKNTPLNSGIQPDLKIETAIIGAGTSGLYTAYRLVTDKKYTADQVQIFDLSSKLGGRLE
SVIMPGMDFWGELGGMRYLTSQEIVTTLIEGYISPKDPKKRIPVLKDKMTPVPFPMGKSSKLLMYLRKERFKQDAWDEAQ
KKGKKLPTRYYLNETDLGFSSDQLFNKIIYDVLMADPWVAKKYQKKIKKGHNVYDYTFELTSEDWDEIKPRLVYNFPKSP
YDKRKVNDLGFWNLIKDQVSQEGYEFLANAGGYYSNTINWNSAEAFPYMVGDFTAGTIYKTIEEGYDSIAYAVANSYMEH
KGACIWSENKLETFTKEHSVKTHKYQLTFLNIKTNSKWHVYANSIVLAMPRKSLELLDQNNFFFNVNENSVLNENIRSVI
MEPAFKILMGFEYPWWKELGIDSGHSITDLPMRQCYYFGTDKKTKNSMLLGSYGDMETETFWKALSDDKVLFEVKAAKSA
SLKELHQLNDVQATKLMVDELMNQLRELHGKDVTIPEPYVTYFKDWTDEPFGAGYHAWKAGFSVGDVMKYMRKPKHDEQI
HICGEAYSDQQGWVEGAFCEAEKMLQDYFGLKRPFWLPDNYYLGW
>Mature_604_residues
TMFMYCLNVYPKTAINHKTMNKNTPLNSGIQPDLKIETAIIGAGTSGLYTAYRLVTDKKYTADQVQIFDLSSKLGGRLES
VIMPGMDFWGELGGMRYLTSQEIVTTLIEGYISPKDPKKRIPVLKDKMTPVPFPMGKSSKLLMYLRKERFKQDAWDEAQK
KGKKLPTRYYLNETDLGFSSDQLFNKIIYDVLMADPWVAKKYQKKIKKGHNVYDYTFELTSEDWDEIKPRLVYNFPKSPY
DKRKVNDLGFWNLIKDQVSQEGYEFLANAGGYYSNTINWNSAEAFPYMVGDFTAGTIYKTIEEGYDSIAYAVANSYMEHK
GACIWSENKLETFTKEHSVKTHKYQLTFLNIKTNSKWHVYANSIVLAMPRKSLELLDQNNFFFNVNENSVLNENIRSVIM
EPAFKILMGFEYPWWKELGIDSGHSITDLPMRQCYYFGTDKKTKNSMLLGSYGDMETETFWKALSDDKVLFEVKAAKSAS
LKELHQLNDVQATKLMVDELMNQLRELHGKDVTIPEPYVTYFKDWTDEPFGAGYHAWKAGFSVGDVMKYMRKPKHDEQIH
ICGEAYSDQQGWVEGAFCEAEKMLQDYFGLKRPFWLPDNYYLGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70096; Mature: 69965

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMFMYCLNVYPKTAINHKTMNKNTPLNSGIQPDLKIETAIIGAGTSGLYTAYRLVTDKK
CCCEEEEHHCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHEEECCC
YTADQVQIFDLSSKLGGRLESVIMPGMDFWGELGGMRYLTSQEIVTTLIEGYISPKDPKK
CCCCCEEEEECHHHHCCHHHHHHCCCHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCHH
RIPVLKDKMTPVPFPMGKSSKLLMYLRKERFKQDAWDEAQKKGKKLPTRYYLNETDLGFS
CCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC
SDQLFNKIIYDVLMADPWVAKKYQKKIKKGHNVYDYTFELTSEDWDEIKPRLVYNFPKSP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCCCEEEEECCCCC
YDKRKVNDLGFWNLIKDQVSQEGYEFLANAGGYYSNTINWNSAEAFPYMVGDFTAGTIYK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
TIEEGYDSIAYAVANSYMEHKGACIWSENKLETFTKEHSVKTHKYQLTFLNIKTNSKWHV
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCEEEEEEEEEEEEEECCEEEE
YANSIVLAMPRKSLELLDQNNFFFNVNENSVLNENIRSVIMEPAFKILMGFEYPWWKELG
EECEEEEEECCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC
IDSGHSITDLPMRQCYYFGTDKKTKNSMLLGSYGDMETETFWKALSDDKVLFEVKAAKSA
CCCCCCCCCCCHHHEEEECCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCC
SLKELHQLNDVQATKLMVDELMNQLRELHGKDVTIPEPYVTYFKDWTDEPFGAGYHAWKA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHC
GFSVGDVMKYMRKPKHDEQIHICGEAYSDQQGWVEGAFCEAEKMLQDYFGLKRPFWLPDN
CCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
YYLGW
CCCCC
>Mature Secondary Structure 
TMFMYCLNVYPKTAINHKTMNKNTPLNSGIQPDLKIETAIIGAGTSGLYTAYRLVTDKK
CCEEEEHHCCCCHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHEEECCC
YTADQVQIFDLSSKLGGRLESVIMPGMDFWGELGGMRYLTSQEIVTTLIEGYISPKDPKK
CCCCCEEEEECHHHHCCHHHHHHCCCHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCHH
RIPVLKDKMTPVPFPMGKSSKLLMYLRKERFKQDAWDEAQKKGKKLPTRYYLNETDLGFS
CCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC
SDQLFNKIIYDVLMADPWVAKKYQKKIKKGHNVYDYTFELTSEDWDEIKPRLVYNFPKSP
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHCCCEEEEECCCCC
YDKRKVNDLGFWNLIKDQVSQEGYEFLANAGGYYSNTINWNSAEAFPYMVGDFTAGTIYK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
TIEEGYDSIAYAVANSYMEHKGACIWSENKLETFTKEHSVKTHKYQLTFLNIKTNSKWHV
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCEEEEEEEEEEEEEECCEEEE
YANSIVLAMPRKSLELLDQNNFFFNVNENSVLNENIRSVIMEPAFKILMGFEYPWWKELG
EECEEEEEECCHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCC
IDSGHSITDLPMRQCYYFGTDKKTKNSMLLGSYGDMETETFWKALSDDKVLFEVKAAKSA
CCCCCCCCCCCHHHEEEECCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCC
SLKELHQLNDVQATKLMVDELMNQLRELHGKDVTIPEPYVTYFKDWTDEPFGAGYHAWKA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHC
GFSVGDVMKYMRKPKHDEQIHICGEAYSDQQGWVEGAFCEAEKMLQDYFGLKRPFWLPDN
CCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
YYLGW
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA