Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302226

Identifier: 146302226

GI number: 146302226

Start: 5429157

End: 5430581

Strand: Reverse

Name: 146302226

Synonym: Fjoh_4499

Alternate gene names: NA

Gene position: 5430581-5429157 (Counterclockwise)

Preceding gene: 146302227

Following gene: 146302225

Centisome position: 89.07

GC content: 37.54

Gene sequence:

>1425_bases
ATGCTAAAAAAAATAGCCTATATAACTCTATTTGCATTAACGTTGACCTCTTGCAGCGATACGCTGGATGATATCAACAA
AAATCCAAATGCAACTGAAACACCATTGGCACCTTACTTGTTAACAGGAACTTTAAAACAAGGAGCTGACTTATATTGGG
GAGATGCTAATAATTTTAACTCGTCTTTACTATTTGTACAGCATTGGGCTAAAATTCAATACACTGAGCCAGACAGATAT
GATGTTTCGAACACGTCTTTTACTTCTTTATGGAATACAGGTTATGCAACCTTGATTACAGACTTGAATACCATTATTAA
TTTCCCGGATGCTCAGGCCAATTCAAATTATAAAGGAATTGCTATTGCTTTGCGTTCATGGACATTTTTATTGTTAACAG
ATGCTTACGGAAATATTCCGTACAAAGAAGCAGGTCAAAAAGTAACACCAGCATACGATAGTCAAAAAGATGTGTACACA
GGTCTGCTTGAAGATTTAAAAAAAGCCCAATCTTTGTTAGGAGCAGCAAATGGTACTGTAACTGGAGATTTAGTTTACAA
GGGAGATGTTGTAAAATGGAAAAGATTTGTGAATTCACTTCGTCTGAGAATTGCATTAAGAATTTCAGACAGAGAACCGG
TTTTAGCTAAACAAGCGGCTATTGATGCAACAAGTGATGCGGCTGGAGTATTAGCCAGTAATGCAGATACATTTAAGTTT
ACTTACATCAGCTCGCCTCAACAAAACCCTGCATCAGCCTGGTTTGAAACTCGTGATGATTTCCGTATTTCAAAAACTAT
GGTAGATAAATTAAAAGAATTTTCAGATCCGCGTTTACCGGTTTATGCACAATTGCCATCAGATGCAAGTGTTGGTACAT
ACGTTGGCGGCGGTAACGGATTATCAAACAGTGATGCCAACAGCCAGGGTTTTGCCAAAACATCAAAACCAGGAACTTAT
TTTCTGACATCAACATCACCGGCGGTAATTTATTCTTACTCTGAAGTATTGTTCAATCTTGCTGAAGCTGCAGCTAGAGG
TTATATTTCTGGAGATGCAGAACAGCTTTATAAAAATGCAATTACGGCATCTTTCAATCAATTTGGAATTACTGATGCAA
CAGTTATTTCTAATTATTTGAATCAGGCAAACGTGAAGTACGATGCGGCTAATTATGCTAAATCAATTGGTACTCAAAAA
TGGATTGCTTTCTTCGGACAAGGTTTAGATGCTTTTACAGAATGGAGAAGATTAGATTATCCAGTATTAACAGCGGGGCC
GGCTACCGTTTTAGACGGAAAAATTCCTTCTCGTTTTTTCTATCCGGGTACAGAGCAGTCACTAAATGGTGTAAGCTACC
AGGCGGCGATAGAAGCTCAGGGAAAAGATTTACTGACTACAAAATTATGGTTTGATGTAAAATAA

Upstream 100 bases:

>100_bases
TTTCAATACTGGAAATGCACAAGGTTTGGAGAGTTTAGCTTTACCAACAACTAGAAATTTCAGCCTTAATGTTAATCTTA
AATTCTAAAAATACAGAATC

Downstream 100 bases:

>100_bases
TCTGCATTAGAACTAATTTTTAAGCTGAATATATAAAAAGGCTGTCTCACAATTCGTGAGGCAGCCTTTTTTGTTTTACT
GCAAAACAGCAATTAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MLKKIAYITLFALTLTSCSDTLDDINKNPNATETPLAPYLLTGTLKQGADLYWGDANNFNSSLLFVQHWAKIQYTEPDRY
DVSNTSFTSLWNTGYATLITDLNTIINFPDAQANSNYKGIAIALRSWTFLLLTDAYGNIPYKEAGQKVTPAYDSQKDVYT
GLLEDLKKAQSLLGAANGTVTGDLVYKGDVVKWKRFVNSLRLRIALRISDREPVLAKQAAIDATSDAAGVLASNADTFKF
TYISSPQQNPASAWFETRDDFRISKTMVDKLKEFSDPRLPVYAQLPSDASVGTYVGGGNGLSNSDANSQGFAKTSKPGTY
FLTSTSPAVIYSYSEVLFNLAEAAARGYISGDAEQLYKNAITASFNQFGITDATVISNYLNQANVKYDAANYAKSIGTQK
WIAFFGQGLDAFTEWRRLDYPVLTAGPATVLDGKIPSRFFYPGTEQSLNGVSYQAAIEAQGKDLLTTKLWFDVK

Sequences:

>Translated_474_residues
MLKKIAYITLFALTLTSCSDTLDDINKNPNATETPLAPYLLTGTLKQGADLYWGDANNFNSSLLFVQHWAKIQYTEPDRY
DVSNTSFTSLWNTGYATLITDLNTIINFPDAQANSNYKGIAIALRSWTFLLLTDAYGNIPYKEAGQKVTPAYDSQKDVYT
GLLEDLKKAQSLLGAANGTVTGDLVYKGDVVKWKRFVNSLRLRIALRISDREPVLAKQAAIDATSDAAGVLASNADTFKF
TYISSPQQNPASAWFETRDDFRISKTMVDKLKEFSDPRLPVYAQLPSDASVGTYVGGGNGLSNSDANSQGFAKTSKPGTY
FLTSTSPAVIYSYSEVLFNLAEAAARGYISGDAEQLYKNAITASFNQFGITDATVISNYLNQANVKYDAANYAKSIGTQK
WIAFFGQGLDAFTEWRRLDYPVLTAGPATVLDGKIPSRFFYPGTEQSLNGVSYQAAIEAQGKDLLTTKLWFDVK
>Mature_474_residues
MLKKIAYITLFALTLTSCSDTLDDINKNPNATETPLAPYLLTGTLKQGADLYWGDANNFNSSLLFVQHWAKIQYTEPDRY
DVSNTSFTSLWNTGYATLITDLNTIINFPDAQANSNYKGIAIALRSWTFLLLTDAYGNIPYKEAGQKVTPAYDSQKDVYT
GLLEDLKKAQSLLGAANGTVTGDLVYKGDVVKWKRFVNSLRLRIALRISDREPVLAKQAAIDATSDAAGVLASNADTFKF
TYISSPQQNPASAWFETRDDFRISKTMVDKLKEFSDPRLPVYAQLPSDASVGTYVGGGNGLSNSDANSQGFAKTSKPGTY
FLTSTSPAVIYSYSEVLFNLAEAAARGYISGDAEQLYKNAITASFNQFGITDATVISNYLNQANVKYDAANYAKSIGTQK
WIAFFGQGLDAFTEWRRLDYPVLTAGPATVLDGKIPSRFFYPGTEQSLNGVSYQAAIEAQGKDLLTTKLWFDVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52025; Mature: 52025

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKIAYITLFALTLTSCSDTLDDINKNPNATETPLAPYLLTGTLKQGADLYWGDANNFN
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHCCCEEEECCCCCCC
SSLLFVQHWAKIQYTEPDRYDVSNTSFTSLWNTGYATLITDLNTIINFPDAQANSNYKGI
CEEEEEEECCEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEE
AIALRSWTFLLLTDAYGNIPYKEAGQKVTPAYDSQKDVYTGLLEDLKKAQSLLGAANGTV
EEEEECEEEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
TGDLVYKGDVVKWKRFVNSLRLRIALRISDREPVLAKQAAIDATSDAAGVLASNADTFKF
EEEEEEECCHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHCCCCCCCCHHEECCCCEEEE
TYISSPQQNPASAWFETRDDFRISKTMVDKLKEFSDPRLPVYAQLPSDASVGTYVGGGNG
EEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEECCCCC
LSNSDANSQGFAKTSKPGTYFLTSTSPAVIYSYSEVLFNLAEAAARGYISGDAEQLYKNA
CCCCCCCCCCCEECCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ITASFNQFGITDATVISNYLNQANVKYDAANYAKSIGTQKWIAFFGQGLDAFTEWRRLDY
HHHCHHHCCCCHHHHHHHHHHHCCCEECHHHHHHHHCHHHHHHHHHCCHHHHHHHHHCCC
PVLTAGPATVLDGKIPSRFFYPGTEQSLNGVSYQAAIEAQGKDLLTTKLWFDVK
CEEECCCCCEECCCCCCCEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECC
>Mature Secondary Structure
MLKKIAYITLFALTLTSCSDTLDDINKNPNATETPLAPYLLTGTLKQGADLYWGDANNFN
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHCCCEEEECCCCCCC
SSLLFVQHWAKIQYTEPDRYDVSNTSFTSLWNTGYATLITDLNTIINFPDAQANSNYKGI
CEEEEEEECCEEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCEE
AIALRSWTFLLLTDAYGNIPYKEAGQKVTPAYDSQKDVYTGLLEDLKKAQSLLGAANGTV
EEEEECEEEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
TGDLVYKGDVVKWKRFVNSLRLRIALRISDREPVLAKQAAIDATSDAAGVLASNADTFKF
EEEEEEECCHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHCCCCCCCCHHEECCCCEEEE
TYISSPQQNPASAWFETRDDFRISKTMVDKLKEFSDPRLPVYAQLPSDASVGTYVGGGNG
EEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEECCCCC
LSNSDANSQGFAKTSKPGTYFLTSTSPAVIYSYSEVLFNLAEAAARGYISGDAEQLYKNA
CCCCCCCCCCCEECCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ITASFNQFGITDATVISNYLNQANVKYDAANYAKSIGTQKWIAFFGQGLDAFTEWRRLDY
HHHCHHHCCCCHHHHHHHHHHHCCCEECHHHHHHHHCHHHHHHHHHCCHHHHHHHHHCCC
PVLTAGPATVLDGKIPSRFFYPGTEQSLNGVSYQAAIEAQGKDLLTTKLWFDVK
CEEECCCCCEECCCCCCCEECCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA