Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302224

Identifier: 146302224

GI number: 146302224

Start: 5425512

End: 5427050

Strand: Reverse

Name: 146302224

Synonym: Fjoh_4497

Alternate gene names: NA

Gene position: 5427050-5425512 (Counterclockwise)

Preceding gene: 146302225

Following gene: 146302220

Centisome position: 89.01

GC content: 37.3

Gene sequence:

>1539_bases
ATGTTAAAACGTAACGGCTTTGATGATGAGTTAAATTTAACTCATTTAGATGCAAACATAGATTCAAATCAAAATGAAAT
ATCATTTAAAGGAGCTCCCGAAACCGATGGTATATTGGCGAGTATGATGAAAGGATATTCAAAAGTTCAAATTGAAACTC
CAATCAGGCCTTTTCATGAAAGCAATCTGCAGAAAATTCTAGACAATGTAGATTATGGTATTTTAAGAGCATTACAAGGA
ACCTGGGTAAGCTATAATCATAATGGAAATGGTTCAAGAGAATTAATAGGAAGCGGTATACACACTACAATTATGCCTTC
GCCGGGCACTAATGCAGGAACGATTCCCGGAAAATTTAGTTTTGAATGTGAAGAATATATCGAAAAACTGACATTTGATT
TAGTTCCTGGCGGGGTTCGCAATCGCGGCGGTGCAAACGAGCAGTTTTGCGGTGCTGTTAAATATGAACAGAGTATTAAA
AGTGTAAATGCTGTGCCGGGAGAATCAGCTTTAAAATATACGCCAATTCATGAAGAAAACGGAATGTATTTGTGGCTGAG
CGATATATTTAATTATGCTGCCACAGAAAAAACAATTGAAGAGGACCGAGGCATACATGCATTAGAACCAAATGCTCCTA
ATAGAGATTTATATAAAAGCGGTTATCAGGACGAAACGGTTTTCTTGATTATAAATGATTTAGGTGAAAAAGAATATGTA
ACTCTCGAAAATTTAAAAGGAAGACCTTATCTTTCGATTGTTCCTGCTAAAGAGTTAAAACCGGGAGCAGGGCAGACAGG
ACCTTATTTTATACCCGACTATTCTATTTCACGAAGCGGCGTAATTCCGCACGGAAGCACCATAACATTGTTAGGAGATC
TAACTAGAGGCAAGTCAGGTTATTTAATTAATACAGCACCTGAATTTCCAGAAGGTAATGAAGCGTGGGAATACGATCAC
CTTTCTATTTCAAAAACTATGGGAGGGGCAGGAGCAAGTAAAAAAGAGCCTATAAATCTTGATGAAGCTCCGCCTGCATG
GGTGTTTGAAAAGCTTAACAAGGATAATGACCCTCAGGAAAACAGGATTTATACACAGCGAATTCTGGCACATCCGTTAT
ATCCGTATTCAGTAAGACCGGACTTAAGACTGCGTGATTCTTTAAAAGGAGAAACTATAAAAAATCACGTGCTTATTCAG
ATGTCATCTAAAAATAAAACGGGAGCACAAGGCGGAATATTAAATGTTCCGTTTGTAAATCGTTTTGTTACTACAGTTGA
AATGAACATGCGAATGTGGATTGAAACTGTTGAAGAAAATGGAAAAGAAATTCTGCAGCTGCAATACGAGCAGATCATAT
TTTTTGAATTTGATTTTGGAGATGACGGCGGTACAACAAGCTGGCCTCATATACAAGTAAATACACTTCGTAAAATCGAA
GATGTTTCGCCAGAACAGAGACAATTAATGGAAGAACAGTTTCCATCTTCTCATAAAATAGAATCTCCTGCTTCAGGATG
TCCTTATCATAAAGGTTAA

Upstream 100 bases:

>100_bases
TGAAACGTCCGTTCTGGCTTCCTGACAATTACTATTTAGGATGGTAAAAGGAGAAGTTTTTTGTTAGTAATTCAAATCAT
TAATTTAAAAAAGTAATAGT

Downstream 100 bases:

>100_bases
AATTATTCTGGAGAAATAATTCAGAAACAAAAAAACACAAGAAAAAGAAAAGCCGATGAACAACTCATCGGCTTTACCAG
TATTTGTCTATCCACATTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MLKRNGFDDELNLTHLDANIDSNQNEISFKGAPETDGILASMMKGYSKVQIETPIRPFHESNLQKILDNVDYGILRALQG
TWVSYNHNGNGSRELIGSGIHTTIMPSPGTNAGTIPGKFSFECEEYIEKLTFDLVPGGVRNRGGANEQFCGAVKYEQSIK
SVNAVPGESALKYTPIHEENGMYLWLSDIFNYAATEKTIEEDRGIHALEPNAPNRDLYKSGYQDETVFLIINDLGEKEYV
TLENLKGRPYLSIVPAKELKPGAGQTGPYFIPDYSISRSGVIPHGSTITLLGDLTRGKSGYLINTAPEFPEGNEAWEYDH
LSISKTMGGAGASKKEPINLDEAPPAWVFEKLNKDNDPQENRIYTQRILAHPLYPYSVRPDLRLRDSLKGETIKNHVLIQ
MSSKNKTGAQGGILNVPFVNRFVTTVEMNMRMWIETVEENGKEILQLQYEQIIFFEFDFGDDGGTTSWPHIQVNTLRKIE
DVSPEQRQLMEEQFPSSHKIESPASGCPYHKG

Sequences:

>Translated_512_residues
MLKRNGFDDELNLTHLDANIDSNQNEISFKGAPETDGILASMMKGYSKVQIETPIRPFHESNLQKILDNVDYGILRALQG
TWVSYNHNGNGSRELIGSGIHTTIMPSPGTNAGTIPGKFSFECEEYIEKLTFDLVPGGVRNRGGANEQFCGAVKYEQSIK
SVNAVPGESALKYTPIHEENGMYLWLSDIFNYAATEKTIEEDRGIHALEPNAPNRDLYKSGYQDETVFLIINDLGEKEYV
TLENLKGRPYLSIVPAKELKPGAGQTGPYFIPDYSISRSGVIPHGSTITLLGDLTRGKSGYLINTAPEFPEGNEAWEYDH
LSISKTMGGAGASKKEPINLDEAPPAWVFEKLNKDNDPQENRIYTQRILAHPLYPYSVRPDLRLRDSLKGETIKNHVLIQ
MSSKNKTGAQGGILNVPFVNRFVTTVEMNMRMWIETVEENGKEILQLQYEQIIFFEFDFGDDGGTTSWPHIQVNTLRKIE
DVSPEQRQLMEEQFPSSHKIESPASGCPYHKG
>Mature_512_residues
MLKRNGFDDELNLTHLDANIDSNQNEISFKGAPETDGILASMMKGYSKVQIETPIRPFHESNLQKILDNVDYGILRALQG
TWVSYNHNGNGSRELIGSGIHTTIMPSPGTNAGTIPGKFSFECEEYIEKLTFDLVPGGVRNRGGANEQFCGAVKYEQSIK
SVNAVPGESALKYTPIHEENGMYLWLSDIFNYAATEKTIEEDRGIHALEPNAPNRDLYKSGYQDETVFLIINDLGEKEYV
TLENLKGRPYLSIVPAKELKPGAGQTGPYFIPDYSISRSGVIPHGSTITLLGDLTRGKSGYLINTAPEFPEGNEAWEYDH
LSISKTMGGAGASKKEPINLDEAPPAWVFEKLNKDNDPQENRIYTQRILAHPLYPYSVRPDLRLRDSLKGETIKNHVLIQ
MSSKNKTGAQGGILNVPFVNRFVTTVEMNMRMWIETVEENGKEILQLQYEQIIFFEFDFGDDGGTTSWPHIQVNTLRKIE
DVSPEQRQLMEEQFPSSHKIESPASGCPYHKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57315; Mature: 57315

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRNGFDDELNLTHLDANIDSNQNEISFKGAPETDGILASMMKGYSKVQIETPIRPFHE
CCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCHH
SNLQKILDNVDYGILRALQGTWVSYNHNGNGSRELIGSGIHTTIMPSPGTNAGTIPGKFS
HHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCC
FECEEYIEKLTFDLVPGGVRNRGGANEQFCGAVKYEQSIKSVNAVPGESALKYTPIHEEN
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCEECCC
GMYLWLSDIFNYAATEKTIEEDRGIHALEPNAPNRDLYKSGYQDETVFLIINDLGEKEYV
CEEEEHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCCEEE
TLENLKGRPYLSIVPAKELKPGAGQTGPYFIPDYSISRSGVIPHGSTITLLGDLTRGKSG
EEECCCCCCEEEEECHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCC
YLINTAPEFPEGNEAWEYDHLSISKTMGGAGASKKEPINLDEAPPAWVFEKLNKDNDPQE
EEEECCCCCCCCCCCEEECCEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHH
NRIYTQRILAHPLYPYSVRPDLRLRDSLKGETIKNHVLIQMSSKNKTGAQGGILNVPFVN
HHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEECCEEEEEECCCCCCCCCCCEEECCHHH
RFVTTVEMNMRMWIETVEENGKEILQLQYEQIIFFEFDFGDDGGTTSWPHIQVNTLRKIE
HEEEHEEHHHHHHHHHHHHCCHHHHHEEEEEEEEEEEEECCCCCCCCCCEEEEHHHHHHH
DVSPEQRQLMEEQFPSSHKIESPASGCPYHKG
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKRNGFDDELNLTHLDANIDSNQNEISFKGAPETDGILASMMKGYSKVQIETPIRPFHE
CCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCHH
SNLQKILDNVDYGILRALQGTWVSYNHNGNGSRELIGSGIHTTIMPSPGTNAGTIPGKFS
HHHHHHHHHCCHHHHHHHCCCEEEEECCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCC
FECEEYIEKLTFDLVPGGVRNRGGANEQFCGAVKYEQSIKSVNAVPGESALKYTPIHEEN
CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCEECCC
GMYLWLSDIFNYAATEKTIEEDRGIHALEPNAPNRDLYKSGYQDETVFLIINDLGEKEYV
CEEEEHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCCCCCEEEEEEECCCCCEEE
TLENLKGRPYLSIVPAKELKPGAGQTGPYFIPDYSISRSGVIPHGSTITLLGDLTRGKSG
EEECCCCCCEEEEECHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCCC
YLINTAPEFPEGNEAWEYDHLSISKTMGGAGASKKEPINLDEAPPAWVFEKLNKDNDPQE
EEEECCCCCCCCCCCEEECCEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHH
NRIYTQRILAHPLYPYSVRPDLRLRDSLKGETIKNHVLIQMSSKNKTGAQGGILNVPFVN
HHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEECCEEEEEECCCCCCCCCCCEEECCHHH
RFVTTVEMNMRMWIETVEENGKEILQLQYEQIIFFEFDFGDDGGTTSWPHIQVNTLRKIE
HEEEHEEHHHHHHHHHHHHCCHHHHHEEEEEEEEEEEEECCCCCCCCCCEEEEHHHHHHH
DVSPEQRQLMEEQFPSSHKIESPASGCPYHKG
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA