Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302221

Identifier: 146302221

GI number: 146302221

Start: 5422614

End: 5424299

Strand: Direct

Name: 146302221

Synonym: Fjoh_4494

Alternate gene names: NA

Gene position: 5422614-5424299 (Clockwise)

Preceding gene: 146302219

Following gene: 146302222

Centisome position: 88.94

GC content: 34.4

Gene sequence:

>1686_bases
ATGCACTTCGCAATTCGATATTTATTTTATCTTTATCTTATGTATAGATCAGCTTTTTTTACCATTTTTTTAGTGCTATT
GTTTACATCATGTAAGCAGTATACGGAGTTCGTCAAATCTGATGTAACCTATTATAAAGATGACGATAAACCACATGATT
ATCTGGGTTCATCACCAGATTCTATATTTAAGGTTAATATTGATGTTGATCTTTACAAACGAGAAAATCCCTCTGCTCCG
CTGGGACTGCAGATTAATGCTTTTGGTGCTTTTGACGTTTATTGGGACGGTGTATTAGTGGGAAGCAACGGTAAAATGGC
AAAATCTGGTCAGAGCGAAGTACCGGGAACAGAAATGAGCTATTACCAAATACCCGAAAAACTGGCTGGTAAAGGCAAAC
ATATTGTAACCATAACAGGAACACAAATGCAGCTTAGAGAAACCCTGCGCGGCATAGATGTAAAACTCGAAAGTTATTTA
AGGCTGCACCGCGCACCGCTTATTGTTATGTCTTTTATGAACCTCATGGCTGGGGCTTTTCTCATTGCATCAATTTATTA
TTTTTTTCTATACATCAACAGCACTCGAAAAGAAGCAACAGTTTTGCTTTTCGGAATAATCTGTCTGCTCTTTTTCTGTC
TGCTTATTATAGAATACATAAAATTTTATATCGATATTCCGTATACACACTTTTATACACGGCTGCAAATTGTAGGCTTG
CTTACTTTTATAATTTCCATATTGGTTCCGTGGTATTTTATGCTGCAGTTTGGCTTTAAAAGAAAGCGGTTATTTCTATT
TCTTTTGTTTGCAGGTCTTGTAATAATCTATGTTAAACATTACGGACATTACGACAAAACAGCCATATATTTTAGCTATG
TAATGTGCTTTGTCTCTATTATTATTGCAGCCGATGCGGCATTTCGAAAAATTAAAGGCGGAGTAATAGTAGTTGCGGGT
TTATTGGCCAGCATTGTGGTAAATAAGTTTATATTTTATGATTTTGGATTGTTTATCTCTTTTACCATTATCGTATTGTC
AATGCTTTACCTGCATACCATTAAAACTAAAGCTTTAGAAGAAGCTCATAATGCATCGTTATTACTTTCGTCCAGATTAC
AGCTTGAACTTGTTAAGAAAAATATTCAGCCTCATTTTCTTCGCAATACCCTTACTTCTCTAATTGACTGGATCGAAGAA
TCGCCGCAACAGGGCGTTGTGTTTATTCGGGCGCTGGCAGATGAATTTGATATTATGAATTCAATTTCTGAAGATACCTT
AATACCTGTAAGGCAGGAGATTGAATTATGCAAAAAACATTTAGAAGTAATGTCTTTTAGAAAAGAATTGAATTACAAAT
GGGAAGAAAAAAATATTGATGAAAATGAAGAAATTCCGCCTGCTATTATTCACACCATTATAGAAAATGGCATTACACAC
AGTTTACCTTCAAAAGACGGTTCAATTACTTTCTGTTTAAGTTTTATAAGAGAAAAAAAATACAAACAATATACTTTGCT
TACCGTGGCAAAAAATCGAAATAAAAAGAAAAGCGACCTCAGCGGAACAGGTTTTAAATATATAAAGGCCCGATTAAATG
AAAGTTATGGCAATAACTGGCAGTTTGATTCTTTTGCTGTTGAAGAAGGATGGCTCACAGAAATTAAAATTTTTGATACA
AAATGA

Upstream 100 bases:

>100_bases
TATTACTGTTTTCATGTTTATTGGTTTTATGATACAAGATTACTTTATAAAACAAACCAGTGTTCTTTAAAACATTCAAA
CGGCTCTAAGAGCTTTTGAA

Downstream 100 bases:

>100_bases
AAATTCTAATTATTGAAGACGAAGCGAGAATTGCAAAACGAATCGAAAGAATGACCAGAGGTTTTTTTAATAAAGATGTC
CAGATTTTTCTTTCTGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MHFAIRYLFYLYLMYRSAFFTIFLVLLFTSCKQYTEFVKSDVTYYKDDDKPHDYLGSSPDSIFKVNIDVDLYKRENPSAP
LGLQINAFGAFDVYWDGVLVGSNGKMAKSGQSEVPGTEMSYYQIPEKLAGKGKHIVTITGTQMQLRETLRGIDVKLESYL
RLHRAPLIVMSFMNLMAGAFLIASIYYFFLYINSTRKEATVLLFGIICLLFFCLLIIEYIKFYIDIPYTHFYTRLQIVGL
LTFIISILVPWYFMLQFGFKRKRLFLFLLFAGLVIIYVKHYGHYDKTAIYFSYVMCFVSIIIAADAAFRKIKGGVIVVAG
LLASIVVNKFIFYDFGLFISFTIIVLSMLYLHTIKTKALEEAHNASLLLSSRLQLELVKKNIQPHFLRNTLTSLIDWIEE
SPQQGVVFIRALADEFDIMNSISEDTLIPVRQEIELCKKHLEVMSFRKELNYKWEEKNIDENEEIPPAIIHTIIENGITH
SLPSKDGSITFCLSFIREKKYKQYTLLTVAKNRNKKKSDLSGTGFKYIKARLNESYGNNWQFDSFAVEEGWLTEIKIFDT
K

Sequences:

>Translated_561_residues
MHFAIRYLFYLYLMYRSAFFTIFLVLLFTSCKQYTEFVKSDVTYYKDDDKPHDYLGSSPDSIFKVNIDVDLYKRENPSAP
LGLQINAFGAFDVYWDGVLVGSNGKMAKSGQSEVPGTEMSYYQIPEKLAGKGKHIVTITGTQMQLRETLRGIDVKLESYL
RLHRAPLIVMSFMNLMAGAFLIASIYYFFLYINSTRKEATVLLFGIICLLFFCLLIIEYIKFYIDIPYTHFYTRLQIVGL
LTFIISILVPWYFMLQFGFKRKRLFLFLLFAGLVIIYVKHYGHYDKTAIYFSYVMCFVSIIIAADAAFRKIKGGVIVVAG
LLASIVVNKFIFYDFGLFISFTIIVLSMLYLHTIKTKALEEAHNASLLLSSRLQLELVKKNIQPHFLRNTLTSLIDWIEE
SPQQGVVFIRALADEFDIMNSISEDTLIPVRQEIELCKKHLEVMSFRKELNYKWEEKNIDENEEIPPAIIHTIIENGITH
SLPSKDGSITFCLSFIREKKYKQYTLLTVAKNRNKKKSDLSGTGFKYIKARLNESYGNNWQFDSFAVEEGWLTEIKIFDT
K
>Mature_561_residues
MHFAIRYLFYLYLMYRSAFFTIFLVLLFTSCKQYTEFVKSDVTYYKDDDKPHDYLGSSPDSIFKVNIDVDLYKRENPSAP
LGLQINAFGAFDVYWDGVLVGSNGKMAKSGQSEVPGTEMSYYQIPEKLAGKGKHIVTITGTQMQLRETLRGIDVKLESYL
RLHRAPLIVMSFMNLMAGAFLIASIYYFFLYINSTRKEATVLLFGIICLLFFCLLIIEYIKFYIDIPYTHFYTRLQIVGL
LTFIISILVPWYFMLQFGFKRKRLFLFLLFAGLVIIYVKHYGHYDKTAIYFSYVMCFVSIIIAADAAFRKIKGGVIVVAG
LLASIVVNKFIFYDFGLFISFTIIVLSMLYLHTIKTKALEEAHNASLLLSSRLQLELVKKNIQPHFLRNTLTSLIDWIEE
SPQQGVVFIRALADEFDIMNSISEDTLIPVRQEIELCKKHLEVMSFRKELNYKWEEKNIDENEEIPPAIIHTIIENGITH
SLPSKDGSITFCLSFIREKKYKQYTLLTVAKNRNKKKSDLSGTGFKYIKARLNESYGNNWQFDSFAVEEGWLTEIKIFDT
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64997; Mature: 64997

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFAIRYLFYLYLMYRSAFFTIFLVLLFTSCKQYTEFVKSDVTYYKDDDKPHDYLGSSPD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHCCCCCC
SIFKVNIDVDLYKRENPSAPLGLQINAFGAFDVYWDGVLVGSNGKMAKSGQSEVPGTEMS
CEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCH
YYQIPEKLAGKGKHIVTITGTQMQLRETLRGIDVKLESYLRLHRAPLIVMSFMNLMAGAF
HHHCCHHHCCCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIASIYYFFLYINSTRKEATVLLFGIICLLFFCLLIIEYIKFYIDIPYTHFYTRLQIVGL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LTFIISILVPWYFMLQFGFKRKRLFLFLLFAGLVIIYVKHYGHYDKTAIYFSYVMCFVSI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IIAADAAFRKIKGGVIVVAGLLASIVVNKFIFYDFGLFISFTIIVLSMLYLHTIKTKALE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAHNASLLLSSRLQLELVKKNIQPHFLRNTLTSLIDWIEESPQQGVVFIRALADEFDIMN
HHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
SISEDTLIPVRQEIELCKKHLEVMSFRKELNYKWEEKNIDENEEIPPAIIHTIIENGITH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
SLPSKDGSITFCLSFIREKKYKQYTLLTVAKNRNKKKSDLSGTGFKYIKARLNESYGNNW
CCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
QFDSFAVEEGWLTEIKIFDTK
CCCCEEECCCCEEEEEEEECC
>Mature Secondary Structure
MHFAIRYLFYLYLMYRSAFFTIFLVLLFTSCKQYTEFVKSDVTYYKDDDKPHDYLGSSPD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHCCCCCC
SIFKVNIDVDLYKRENPSAPLGLQINAFGAFDVYWDGVLVGSNGKMAKSGQSEVPGTEMS
CEEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEECCEEECCCCCCCCCCCCCCCCCCCH
YYQIPEKLAGKGKHIVTITGTQMQLRETLRGIDVKLESYLRLHRAPLIVMSFMNLMAGAF
HHHCCHHHCCCCCEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIASIYYFFLYINSTRKEATVLLFGIICLLFFCLLIIEYIKFYIDIPYTHFYTRLQIVGL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LTFIISILVPWYFMLQFGFKRKRLFLFLLFAGLVIIYVKHYGHYDKTAIYFSYVMCFVSI
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IIAADAAFRKIKGGVIVVAGLLASIVVNKFIFYDFGLFISFTIIVLSMLYLHTIKTKALE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAHNASLLLSSRLQLELVKKNIQPHFLRNTLTSLIDWIEESPQQGVVFIRALADEFDIMN
HHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
SISEDTLIPVRQEIELCKKHLEVMSFRKELNYKWEEKNIDENEEIPPAIIHTIIENGITH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
SLPSKDGSITFCLSFIREKKYKQYTLLTVAKNRNKKKSDLSGTGFKYIKARLNESYGNNW
CCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
QFDSFAVEEGWLTEIKIFDTK
CCCCEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA