Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302219

Identifier: 146302219

GI number: 146302219

Start: 5419271

End: 5420098

Strand: Direct

Name: 146302219

Synonym: Fjoh_4492

Alternate gene names: NA

Gene position: 5419271-5420098 (Clockwise)

Preceding gene: 146302216

Following gene: 146302221

Centisome position: 88.89

GC content: 33.57

Gene sequence:

>828_bases
ATGGAACTAAAAGATCGTCTTTATAATCAAATTCAAATTAAGGCTTCACATAACAGTTATGTTGATGCATTGCCGGCTCT
GCCTACTCAATTATTGTTTGATCCAAATGATCCTGCAAAAGATGGATGCTTGGGACTCGAACTCGACATTTGGAGGCATT
CCTCAAAATATGTTCCGTATAGCTCTATACAGGAAGGATATTTTACTGTAAGTCATTCAAATGGACGTCAAACCAAATTG
AAATATTTTCTTGACATTCTAAAAACCTGGCACGAAGCCAATAAATTACATTACCCGGTTTTTGTTACTATAGACATAAA
AAGTAAATTCGGAGGATATGCCAGATTTCATGAAGAAATCGATACGTATTTGCAGCAGTATTTTGGAGATGATAAAATCT
TTATGCCAAATGCTATGATGCCAGATAGAAAAGCAGGATTATATGATAATGCCAGAGTTTACGGCTGGCATAAAATTGGT
GATATGTTAGGCAAATTTATTTTTTGCCTGAGCGGAAACAAGGGATGGAAAAAAAGATACTCTAATACTGATATTTTAGA
CCGACGCTGTTTTAGTGATATAGATATTGATGATGAAAAGGATATTAATAATATTGTTGTTTATAATATGTCAAAATCAA
AAGGTTTAAAGTATTCTTACAGAGGACCTTCAACCCGCATTACGCGTGTGTACGATGTTGACAAAGAGAAAGACTGGAAT
GATATTTTAAGATTCAATCATTCAGTAATAGCAACAAATAAAGTCAATGATACTAAATGGGCAAAGGTTAATAACACCTC
TCCTATAAATGTTAAAACAGGAGTTTAA

Upstream 100 bases:

>100_bases
TAAAGAAGTTATGCCCGCTTTGATTAAGTCGGCAGCAAGATGCTTATCTCTCGAACTTCATTCCTCTTTATTATTTTATT
AACCCCTAAATAAAAAAACT

Downstream 100 bases:

>100_bases
CTAAATAAAAAACATGCTTAATTTTTTAAGCATGTTTTTTATAAACCTGAAAGATTAATTGCGATTCGCGTTATTTGCTT
GTCTAATTCCTTTTGGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MELKDRLYNQIQIKASHNSYVDALPALPTQLLFDPNDPAKDGCLGLELDIWRHSSKYVPYSSIQEGYFTVSHSNGRQTKL
KYFLDILKTWHEANKLHYPVFVTIDIKSKFGGYARFHEEIDTYLQQYFGDDKIFMPNAMMPDRKAGLYDNARVYGWHKIG
DMLGKFIFCLSGNKGWKKRYSNTDILDRRCFSDIDIDDEKDINNIVVYNMSKSKGLKYSYRGPSTRITRVYDVDKEKDWN
DILRFNHSVIATNKVNDTKWAKVNNTSPINVKTGV

Sequences:

>Translated_275_residues
MELKDRLYNQIQIKASHNSYVDALPALPTQLLFDPNDPAKDGCLGLELDIWRHSSKYVPYSSIQEGYFTVSHSNGRQTKL
KYFLDILKTWHEANKLHYPVFVTIDIKSKFGGYARFHEEIDTYLQQYFGDDKIFMPNAMMPDRKAGLYDNARVYGWHKIG
DMLGKFIFCLSGNKGWKKRYSNTDILDRRCFSDIDIDDEKDINNIVVYNMSKSKGLKYSYRGPSTRITRVYDVDKEKDWN
DILRFNHSVIATNKVNDTKWAKVNNTSPINVKTGV
>Mature_275_residues
MELKDRLYNQIQIKASHNSYVDALPALPTQLLFDPNDPAKDGCLGLELDIWRHSSKYVPYSSIQEGYFTVSHSNGRQTKL
KYFLDILKTWHEANKLHYPVFVTIDIKSKFGGYARFHEEIDTYLQQYFGDDKIFMPNAMMPDRKAGLYDNARVYGWHKIG
DMLGKFIFCLSGNKGWKKRYSNTDILDRRCFSDIDIDDEKDINNIVVYNMSKSKGLKYSYRGPSTRITRVYDVDKEKDWN
DILRFNHSVIATNKVNDTKWAKVNNTSPINVKTGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32012; Mature: 32012

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKDRLYNQIQIKASHNSYVDALPALPTQLLFDPNDPAKDGCLGLELDIWRHSSKYVPY
CCHHHHCCCEEEEEECCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCCH
SSIQEGYFTVSHSNGRQTKLKYFLDILKTWHEANKLHYPVFVTIDIKSKFGGYARFHEEI
HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEECEEEEEEEECCCCCCHHHHHHHH
DTYLQQYFGDDKIFMPNAMMPDRKAGLYDNARVYGWHKIGDMLGKFIFCLSGNKGWKKRY
HHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHEEEEECCCCHHHHHC
SNTDILDRRCFSDIDIDDEKDINNIVVYNMSKSKGLKYSYRGPSTRITRVYDVDKEKDWN
CCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCHH
DILRFNHSVIATNKVNDTKWAKVNNTSPINVKTGV
HHHHHCCEEEEECCCCCCEEEEECCCCCEEEECCC
>Mature Secondary Structure
MELKDRLYNQIQIKASHNSYVDALPALPTQLLFDPNDPAKDGCLGLELDIWRHSSKYVPY
CCHHHHCCCEEEEEECCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCCH
SSIQEGYFTVSHSNGRQTKLKYFLDILKTWHEANKLHYPVFVTIDIKSKFGGYARFHEEI
HHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEECEEEEEEEECCCCCCHHHHHHHH
DTYLQQYFGDDKIFMPNAMMPDRKAGLYDNARVYGWHKIGDMLGKFIFCLSGNKGWKKRY
HHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHEEEEECCCCHHHHHC
SNTDILDRRCFSDIDIDDEKDINNIVVYNMSKSKGLKYSYRGPSTRITRVYDVDKEKDWN
CCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCHH
DILRFNHSVIATNKVNDTKWAKVNNTSPINVKTGV
HHHHHCCEEEEECCCCCCEEEEECCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA