Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301823

Identifier: 146301823

GI number: 146301823

Start: 4893231

End: 4894148

Strand: Reverse

Name: 146301823

Synonym: Fjoh_4087

Alternate gene names: NA

Gene position: 4894148-4893231 (Counterclockwise)

Preceding gene: 146301824

Following gene: 146301822

Centisome position: 80.27

GC content: 34.86

Gene sequence:

>918_bases
ATGAAAAAAATATTCATCATAATAACCCTTTCACTTTTCGCGATTAGTTATTCGCAGAAAAAGAAAGATTTATATCTTTT
TACGTCGTTTAGAGAACCTGCAACAGAAGGTTTATATTTGGCCTATAGCGAAGACGGTTACAATTGGAAAGGATTAGTAG
GATCATTTTTAAAACCCGAAATCGGAGCCAGCAAAATTATGCGTGATCCGTCCATCACAAAAGGAGCAGACGGAACCTAT
CACATGGTTTGGACAACAGATTGGAAAGGTGGGAACGGTTTTGGATATGCAAGTTCAAAAGACCTGATTCATTGGTCGCA
ACAGGAATATATTCCAGTAATGAAAAACGAACCAGAAGTGGTAAACGTTTGGGCGCCGGAGATTTTTTATGATGATGTCA
AAAAAGAATACATTATTATTTGGGCATCAACAATTCCGTTCCGATTTGAAAAAGGAGTTGAAGAAGAGAAAAATAACCAC
AGAATGTATTATGTAACGACAAAAGATTTTAAAACTTTTTCAGATACAAAACTATACTACGATCCAGGTTTCAGTGTAAT
TGATTGTGTGATTGTCAAAAAAGGAAAGAAAGATTATGTTTTGGTTTTGAAAGACAATACAAGACCCATGCGAAACATAA
AAGTAGCTTTCGGGAAATCGCCTTTAGGTCCGTTTGAAAAGAGTTCTGAACCGTTAACAGAATATTTATCAGAAGGCCCG
ACAGTAGTGAAAGTCGATAAAAACTGGTTATTGTATTATGATAATTACGGTTCAAAAAATTATAAAGCGTTAAGCACAAC
AGATTTTGTTCATTTTGAAGATGTATCATCCAAAATAAGCCTTCCCGAAGGACACAAACACGGAACGATTACAACAATCT
CTGAAGACGTTTTAAAAGGATTAATTGAAAGAAAATAA

Upstream 100 bases:

>100_bases
AATGCGTTCCTGCAAGGTTTTCAAAACCTTGTAGGTTTAGTTTGTGCACATAGAAATACCTACGAGGTTTTGGAAACCTC
GCAGGAAAAGAAAACAAGAA

Downstream 100 bases:

>100_bases
AAGAATTTATTCTCAAAAAGGCTCTTTTGCCTGAACAGAATATTTTAAAATTATTTTTATCAGCAAAAGCCCCAGAGGGG
TAAAATATTTATAGAAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Alpha-N-Arabinofuranosidase; Glycosyl Hydrolase Family; Beta-Galactosidase I; Endo-1 4-Beta-Xylanase D; Arabinofuranosidase; Glycosylhydrolase; Pectinesterase; Beta-Galactosidase; Beta-Xylosidase; Alpha L-Arabinofuranosidase; Beta-Fructosidase Superfamily Protein; Xylosidase/Arabinofuranosidase; Hydrolase; Alpha-L-Arabinofuranosidase B

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MKKIFIIITLSLFAISYSQKKKDLYLFTSFREPATEGLYLAYSEDGYNWKGLVGSFLKPEIGASKIMRDPSITKGADGTY
HMVWTTDWKGGNGFGYASSKDLIHWSQQEYIPVMKNEPEVVNVWAPEIFYDDVKKEYIIIWASTIPFRFEKGVEEEKNNH
RMYYVTTKDFKTFSDTKLYYDPGFSVIDCVIVKKGKKDYVLVLKDNTRPMRNIKVAFGKSPLGPFEKSSEPLTEYLSEGP
TVVKVDKNWLLYYDNYGSKNYKALSTTDFVHFEDVSSKISLPEGHKHGTITTISEDVLKGLIERK

Sequences:

>Translated_305_residues
MKKIFIIITLSLFAISYSQKKKDLYLFTSFREPATEGLYLAYSEDGYNWKGLVGSFLKPEIGASKIMRDPSITKGADGTY
HMVWTTDWKGGNGFGYASSKDLIHWSQQEYIPVMKNEPEVVNVWAPEIFYDDVKKEYIIIWASTIPFRFEKGVEEEKNNH
RMYYVTTKDFKTFSDTKLYYDPGFSVIDCVIVKKGKKDYVLVLKDNTRPMRNIKVAFGKSPLGPFEKSSEPLTEYLSEGP
TVVKVDKNWLLYYDNYGSKNYKALSTTDFVHFEDVSSKISLPEGHKHGTITTISEDVLKGLIERK
>Mature_305_residues
MKKIFIIITLSLFAISYSQKKKDLYLFTSFREPATEGLYLAYSEDGYNWKGLVGSFLKPEIGASKIMRDPSITKGADGTY
HMVWTTDWKGGNGFGYASSKDLIHWSQQEYIPVMKNEPEVVNVWAPEIFYDDVKKEYIIIWASTIPFRFEKGVEEEKNNH
RMYYVTTKDFKTFSDTKLYYDPGFSVIDCVIVKKGKKDYVLVLKDNTRPMRNIKVAFGKSPLGPFEKSSEPLTEYLSEGP
TVVKVDKNWLLYYDNYGSKNYKALSTTDFVHFEDVSSKISLPEGHKHGTITTISEDVLKGLIERK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35098; Mature: 35098

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFIIITLSLFAISYSQKKKDLYLFTSFREPATEGLYLAYSEDGYNWKGLVGSFLKPE
CCEEEEEEEEEEHHEECCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHCCCC
IGASKIMRDPSITKGADGTYHMVWTTDWKGGNGFGYASSKDLIHWSQQEYIPVMKNEPEV
CCHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCEECCCCCE
VNVWAPEIFYDDVKKEYIIIWASTIPFRFEKGVEEEKNNHRMYYVTTKDFKTFSDTKLYY
EEEECCHHHHHCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEE
DPGFSVIDCVIVKKGKKDYVLVLKDNTRPMRNIKVAFGKSPLGPFEKSSEPLTEYLSEGP
CCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCC
TVVKVDKNWLLYYDNYGSKNYKALSTTDFVHFEDVSSKISLPEGHKHGTITTISEDVLKG
EEEEECCCEEEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHH
LIERK
HHCCC
>Mature Secondary Structure
MKKIFIIITLSLFAISYSQKKKDLYLFTSFREPATEGLYLAYSEDGYNWKGLVGSFLKPE
CCEEEEEEEEEEHHEECCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHCCCC
IGASKIMRDPSITKGADGTYHMVWTTDWKGGNGFGYASSKDLIHWSQQEYIPVMKNEPEV
CCHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCEECCCCCE
VNVWAPEIFYDDVKKEYIIIWASTIPFRFEKGVEEEKNNHRMYYVTTKDFKTFSDTKLYY
EEEECCHHHHHCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEE
DPGFSVIDCVIVKKGKKDYVLVLKDNTRPMRNIKVAFGKSPLGPFEKSSEPLTEYLSEGP
CCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCC
TVVKVDKNWLLYYDNYGSKNYKALSTTDFVHFEDVSSKISLPEGHKHGTITTISEDVLKG
EEEEECCCEEEEEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHH
LIERK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA