| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475105
Identifier: 13475105
GI number: 13475105
Start: 4945710
End: 4946753
Strand: Reverse
Name: 13475105
Synonym: mll6112
Alternate gene names: NA
Gene position: 4946753-4945710 (Counterclockwise)
Preceding gene: 13475111
Following gene: 13475104
Centisome position: 70.31
GC content: 59.96
Gene sequence:
>1044_bases GTGGAGCAAATTATTCGAATTGGCATGGACACGTCAAAGCACGTCTTTCAACTGCATGGTGTGAATGCAGCCGAAGAGGT CGTGCTGCGCAAAAAAATGCGGCGTAAGGAGATGGTGGCTTTCTTCGAGAGGGCGGCGCCAACGGTGGTCGCGCTCGAAG CGTGCGGCGGATCGCATCATTGGGCCCGCCTGCTTGAGGCGCTTGGCCATGACGTGAAACTGATCCCGCCGCAATATGTC AAACCGTACGTAAAGCGCGGCAAGAACGACGCGGCCGATGCGGAGGCTCTTTGCGAAGCGGTAAGCCGCCCGACGATGCG CTTCGTTCGGGTAAAAACCACCGACAACCAGGCGGCTTTGATGCTGGTCGGCATGCGTGACCGACTGGTTCGCAATCGCA CGCAACTTGCCAACGCCATCCGCGGATACGCTGCCGAGTTCGGATTGATCGCTGCCACAGGTACATCGAAGGTCAGATCA TTGCTCGAGCGTATCGCGACTGATGAAACGCTGCCTGAACTGGCACGTGAACTGTTTGGGCTGCACGGCCGCGAATATGA TCGGCTGGAGGACGAAATCGAAAAGGTCGAAGCACGGCTGATGGCGTGGCATCGCACAAACGAATGCAGTCGACGCCTGA CACGGATTCCTGGCGTCGGACCGATCGGCGCATTGATGATGGTCATGAAGACCCCGGCGCCCGAGACGTTCCGATCAGGG CGGCACTTCGCGGCTTGGCTTGGCCTGACGCCGAAGGATCACTCGACAGCTGGCAGGGTCAGGCTTGGCGTGATCACCCG AGCTGGCGATGAAAATCTGCGAAGCGTGCTCGTCGCGGGCGCCACCGCTGTCCTCCGGCATGTTCGGGAGGACCGCGGGA AGAATGCGTCCCCATGGCTGCTGGACATGCTCAACCGCAAACCGCCGAAGCTCGTCGCTGTGGCGCTAGCCAATAAAATC GCCCGCGTCGCCTGGAAGCTGATGGTCACCGGCGAACGATACAATCCCAACGCTGCATTGTCGGCTTATGGCCAGGCAGC ATAG
Upstream 100 bases:
>100_bases GCAGACCGTGGTCCAGACCTGTTGGTGTGGACGGCCTCCTGCACGGCATCAATGTGCCAGAATGAGGTCATCGGAGACCT CAAGCAAAGGAGACCGCCCC
Downstream 100 bases:
>100_bases AGATCAGTCATCCAGGGGAGCACAATGTGACGCGACCTTGGTAGGCTGAACCCGAACTTGCGGGAAACGAGCAGTTGGTG TGATCGATCGATCCGAAACG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MEQIIRIGMDTSKHVFQLHGVNAAEEVVLRKKMRRKEMVAFFERAAPTVVALEACGGSHHWARLLEALGHDVKLIPPQYV KPYVKRGKNDAADAEALCEAVSRPTMRFVRVKTTDNQAALMLVGMRDRLVRNRTQLANAIRGYAAEFGLIAATGTSKVRS LLERIATDETLPELARELFGLHGREYDRLEDEIEKVEARLMAWHRTNECSRRLTRIPGVGPIGALMMVMKTPAPETFRSG RHFAAWLGLTPKDHSTAGRVRLGVITRAGDENLRSVLVAGATAVLRHVREDRGKNASPWLLDMLNRKPPKLVAVALANKI ARVAWKLMVTGERYNPNAALSAYGQAA
Sequences:
>Translated_347_residues MEQIIRIGMDTSKHVFQLHGVNAAEEVVLRKKMRRKEMVAFFERAAPTVVALEACGGSHHWARLLEALGHDVKLIPPQYV KPYVKRGKNDAADAEALCEAVSRPTMRFVRVKTTDNQAALMLVGMRDRLVRNRTQLANAIRGYAAEFGLIAATGTSKVRS LLERIATDETLPELARELFGLHGREYDRLEDEIEKVEARLMAWHRTNECSRRLTRIPGVGPIGALMMVMKTPAPETFRSG RHFAAWLGLTPKDHSTAGRVRLGVITRAGDENLRSVLVAGATAVLRHVREDRGKNASPWLLDMLNRKPPKLVAVALANKI ARVAWKLMVTGERYNPNAALSAYGQAA >Mature_347_residues MEQIIRIGMDTSKHVFQLHGVNAAEEVVLRKKMRRKEMVAFFERAAPTVVALEACGGSHHWARLLEALGHDVKLIPPQYV KPYVKRGKNDAADAEALCEAVSRPTMRFVRVKTTDNQAALMLVGMRDRLVRNRTQLANAIRGYAAEFGLIAATGTSKVRS LLERIATDETLPELARELFGLHGREYDRLEDEIEKVEARLMAWHRTNECSRRLTRIPGVGPIGALMMVMKTPAPETFRSG RHFAAWLGLTPKDHSTAGRVRLGVITRAGDENLRSVLVAGATAVLRHVREDRGKNASPWLLDMLNRKPPKLVAVALANKI ARVAWKLMVTGERYNPNAALSAYGQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 20 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 38592; Mature: 38592
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQIIRIGMDTSKHVFQLHGVNAAEEVVLRKKMRRKEMVAFFERAAPTVVALEACGGSHH CCCHHEECCCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH WARLLEALGHDVKLIPPQYVKPYVKRGKNDAADAEALCEAVSRPTMRFVRVKTTDNQAAL HHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEE MLVGMRDRLVRNRTQLANAIRGYAAEFGLIAATGTSKVRSLLERIATDETLPELARELFG EEECHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHC LHGREYDRLEDEIEKVEARLMAWHRTNECSRRLTRIPGVGPIGALMMVMKTPAPETFRSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCC RHFAAWLGLTPKDHSTAGRVRLGVITRAGDENLRSVLVAGATAVLRHVREDRGKNASPWL CCEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LDMLNRKPPKLVAVALANKIARVAWKLMVTGERYNPNAALSAYGQAA HHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCCC >Mature Secondary Structure MEQIIRIGMDTSKHVFQLHGVNAAEEVVLRKKMRRKEMVAFFERAAPTVVALEACGGSHH CCCHHEECCCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH WARLLEALGHDVKLIPPQYVKPYVKRGKNDAADAEALCEAVSRPTMRFVRVKTTDNQAAL HHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEE MLVGMRDRLVRNRTQLANAIRGYAAEFGLIAATGTSKVRSLLERIATDETLPELARELFG EEECHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHC LHGREYDRLEDEIEKVEARLMAWHRTNECSRRLTRIPGVGPIGALMMVMKTPAPETFRSG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCC RHFAAWLGLTPKDHSTAGRVRLGVITRAGDENLRSVLVAGATAVLRHVREDRGKNASPWL CCEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH LDMLNRKPPKLVAVALANKIARVAWKLMVTGERYNPNAALSAYGQAA HHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]