Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13473386

Identifier: 13473386

GI number: 13473386

Start: 3171031

End: 3171291

Strand: Reverse

Name: 13473386

Synonym: mll3968

Alternate gene names: NA

Gene position: 3171291-3171031 (Counterclockwise)

Preceding gene: 13473387

Following gene: 13473385

Centisome position: 45.07

GC content: 61.3

Gene sequence:

>261_bases
ATGGCCGACGATATCACCGAGACCAGCCAGACTGTTGCCGCCGGCCAGCTGCGTGCCCTCATCGAACGCATCGAGCGGCT
CGAGGAAGAAAAGAAGACGATCGCCGACGACATCAAGGAAGTGTTCGCCGAGGCCAAGGGCACCGGTTTCGACACCAAGG
CGATACGCACCATCATCCGCCTGCGCAAGAAGGACCAGGCCGAGCGCCAGGAAGAGGATGCCATCCTCGATCTGTACATG
GCCGCGCTCGGCATGGTGTAA

Upstream 100 bases:

>100_bases
TAACAGCTTGACCCGCCGCCGCCGGTCGGGCATCGAACCGGCTCAAATTTGCCGCCGTCTTTCGCCGAGTCGCGGCCCAG
AACCAATTTTGGAGAAAAAC

Downstream 100 bases:

>100_bases
GAGACTGTCTGGAAATTCTACTCCGCCGGCCATCTGATGGCGTTTTCTGCGCTTCCCCGTTCTACTGCGGCAGCGCAGTA
GAACTGAGCTCACGGACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MADDITETSQTVAAGQLRALIERIERLEEEKKTIADDIKEVFAEAKGTGFDTKAIRTIIRLRKKDQAERQEEDAILDLYM
AALGMV

Sequences:

>Translated_86_residues
MADDITETSQTVAAGQLRALIERIERLEEEKKTIADDIKEVFAEAKGTGFDTKAIRTIIRLRKKDQAERQEEDAILDLYM
AALGMV
>Mature_85_residues
ADDITETSQTVAAGQLRALIERIERLEEEKKTIADDIKEVFAEAKGTGFDTKAIRTIIRLRKKDQAERQEEDAILDLYMA
ALGMV

Specific function: Unknown

COG id: COG3750

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0335 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3968_RHILO (Q98F28)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_104953.1
- GeneID:   1227614
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll3968
- NMPDR:   fig|266835.1.peg.3057
- HOGENOM:   HBG661468
- OMA:   NGYDVKA
- ProtClustDB:   PRK13694
- HAMAP:   MF_00797
- InterPro:   IPR018753

Pfam domain/function: PF10073 DUF2312

EC number: NA

Molecular weight: Translated: 9697; Mature: 9566

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDITETSQTVAAGQLRALIERIERLEEEKKTIADDIKEVFAEAKGTGFDTKAIRTIIR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LRKKDQAERQEEDAILDLYMAALGMV
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADDITETSQTVAAGQLRALIERIERLEEEKKTIADDIKEVFAEAKGTGFDTKAIRTIIR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LRKKDQAERQEEDAILDLYMAALGMV
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968