| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is suhB
Identifier: 13473355
GI number: 13473355
Start: 3145340
End: 3146140
Strand: Direct
Name: suhB
Synonym: mlr3921
Alternate gene names: 13473355
Gene position: 3145340-3146140 (Clockwise)
Preceding gene: 13473354
Following gene: 13473356
Centisome position: 44.7
GC content: 65.54
Gene sequence:
>801_bases ATGGCACGCTCAGCCCTTCTCAACGTCATGGTCCAGGCCGCAATGAAGGCCGGCCGCTCGCTGTCACGCGACTTTGGTGA GGTCCAGAACCTCCAGGTCTCGTTGAAGGGACCCGGCGACTATGTCAGCCAGGCCGACCGCAAGGCCGAGGACATCATCT TTGCCGAATTGTCGAAGGCGCGCCCGGGCTACGGTTTCCTGATGGAAGAGCGTGGCGCGGTGGAAGGCGAAGACAGCCAG CACCGCTGGATCGTGGATCCGCTCGACGGCACCACCAATTTCCTGCACGGCATTCCGCTGTTCGCCGTCTCGATCGCGCT GGAGCGCCAGGGCCAGATCGTAGCCGGCGTCATCTACAATCCGGCCATGGACGAGCTCTACACGACCGAGCGCGGTGGCG GCGCTTTCATGAACGACCGCCGGCTGCGCGTGGCTGGCCGCATCAAGCTGGTCGACACGGTGATCGGCTGCGGCATGCCG CATCTGGGACGCGGCCACCACGGCAATTTCCTCGTGGAATTGCGTAACGTCATGGCCGAGGTCTCGGGCGTGCGCCGTCT CGGTTCGGCCGCGCTCGATCTCGCTTATGTCGCTGCCGGCCGCATGGACGGTTTCTGGGAAACCGGCCTGTCGGCCTGGG ACATTGCCGCGGGCCTGCTCCTGATCCGCGAAGCCGGCGGCTTCGTCTCGGACATGGATGGCGGGCAGGACATGCTGGAC AACGGCTCGGTGGTCGCGGGCAACGAGGTCATCCAGCGCGCGCTGCTGAAGGCCGTGAAAAAGCCTCTCTCGGCGCGCTG A
Upstream 100 bases:
>100_bases GCCGCCTTTCATCGGCGCCGGCGAACGCATCATCGTCGACACCAACGAAATCACTTACGTGCGCCGCGCCGACTGACGCG CTGCAGCAGGAAGACATACG
Downstream 100 bases:
>100_bases AGGGCCGCAGTCGCAAAACCGCCACCTAAGCTTGAAATACTGTCCGGCGGTTGCCCAGATATGGGGTGAAGCAGGACGAT CGATGGCCAATATCCCGCCC
Product: extragenic suppressor protein SuhB
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MARSALLNVMVQAAMKAGRSLSRDFGEVQNLQVSLKGPGDYVSQADRKAEDIIFAELSKARPGYGFLMEERGAVEGEDSQ HRWIVDPLDGTTNFLHGIPLFAVSIALERQGQIVAGVIYNPAMDELYTTERGGGAFMNDRRLRVAGRIKLVDTVIGCGMP HLGRGHHGNFLVELRNVMAEVSGVRRLGSAALDLAYVAAGRMDGFWETGLSAWDIAAGLLLIREAGGFVSDMDGGQDMLD NGSVVAGNEVIQRALLKAVKKPLSAR
Sequences:
>Translated_266_residues MARSALLNVMVQAAMKAGRSLSRDFGEVQNLQVSLKGPGDYVSQADRKAEDIIFAELSKARPGYGFLMEERGAVEGEDSQ HRWIVDPLDGTTNFLHGIPLFAVSIALERQGQIVAGVIYNPAMDELYTTERGGGAFMNDRRLRVAGRIKLVDTVIGCGMP HLGRGHHGNFLVELRNVMAEVSGVRRLGSAALDLAYVAAGRMDGFWETGLSAWDIAAGLLLIREAGGFVSDMDGGQDMLD NGSVVAGNEVIQRALLKAVKKPLSAR >Mature_265_residues ARSALLNVMVQAAMKAGRSLSRDFGEVQNLQVSLKGPGDYVSQADRKAEDIIFAELSKARPGYGFLMEERGAVEGEDSQH RWIVDPLDGTTNFLHGIPLFAVSIALERQGQIVAGVIYNPAMDELYTTERGGGAFMNDRRLRVAGRIKLVDTVIGCGMPH LGRGHHGNFLVELRNVMAEVSGVRRLGSAALDLAYVAAGRMDGFWETGLSAWDIAAGLLLIREAGGFVSDMDGGQDMLDN GSVVAGNEVIQRALLKAVKKPLSAR
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family
Homologues:
Organism=Homo sapiens, GI7657236, Length=251, Percent_Identity=36.2549800796813, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI5031789, Length=266, Percent_Identity=30.8270676691729, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI221625487, Length=266, Percent_Identity=30.8270676691729, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI221625507, Length=170, Percent_Identity=34.1176470588235, Blast_Score=95, Evalue=6e-20, Organism=Escherichia coli, GI1788882, Length=259, Percent_Identity=42.4710424710425, Blast_Score=221, Evalue=5e-59, Organism=Escherichia coli, GI1790659, Length=129, Percent_Identity=31.7829457364341, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193202570, Length=261, Percent_Identity=33.3333333333333, Blast_Score=135, Evalue=2e-32, Organism=Caenorhabditis elegans, GI193202572, Length=261, Percent_Identity=31.8007662835249, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6320493, Length=208, Percent_Identity=36.5384615384615, Blast_Score=140, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6321836, Length=215, Percent_Identity=30.6976744186047, Blast_Score=115, Evalue=1e-26, Organism=Drosophila melanogaster, GI21357329, Length=240, Percent_Identity=33.75, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI24664922, Length=263, Percent_Identity=29.6577946768061, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI21357957, Length=268, Percent_Identity=33.5820895522388, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI24664918, Length=267, Percent_Identity=31.4606741573034, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI21357303, Length=223, Percent_Identity=34.0807174887892, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI24664926, Length=230, Percent_Identity=30, Blast_Score=120, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SUHB_RHILO (Q98F59)
Other databases:
- EMBL: BA000012 - RefSeq: NP_104922.1 - ProteinModelPortal: Q98F59 - SMR: Q98F59 - GeneID: 1227583 - GenomeReviews: BA000012_GR - KEGG: mlo:mlr3921 - NMPDR: fig|266835.1.peg.3026 - HOGENOM: HBG730251 - OMA: TGFPFKQ - ProtClustDB: CLSK863909 - BRENDA: 3.1.3.25 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 - PANTHER: PTHR20854 - PRINTS: PR00377 - PRINTS: PR01959
Pfam domain/function: PF00459 Inositol_P
EC number: =3.1.3.25
Molecular weight: Translated: 28655; Mature: 28524
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00629 IMP_1; PS00630 IMP_2
Important sites: BINDING 69-69 BINDING 185-185 BINDING 214-214
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSALLNVMVQAAMKAGRSLSRDFGEVQNLQVSLKGPGDYVSQADRKAEDIIFAELSKA CCHHHHHHHHHHHHHHHCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHC RPGYGFLMEERGAVEGEDSQHRWIVDPLDGTTNFLHGIPLFAVSIALERQGQIVAGVIYN CCCCCEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEC PAMDELYTTERGGGAFMNDRRLRVAGRIKLVDTVIGCGMPHLGRGHHGNFLVELRNVMAE CHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH VSGVRRLGSAALDLAYVAAGRMDGFWETGLSAWDIAAGLLLIREAGGFVSDMDGGQDMLD HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHC NGSVVAGNEVIQRALLKAVKKPLSAR CCCEEECHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ARSALLNVMVQAAMKAGRSLSRDFGEVQNLQVSLKGPGDYVSQADRKAEDIIFAELSKA CHHHHHHHHHHHHHHHCHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHC RPGYGFLMEERGAVEGEDSQHRWIVDPLDGTTNFLHGIPLFAVSIALERQGQIVAGVIYN CCCCCEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEC PAMDELYTTERGGGAFMNDRRLRVAGRIKLVDTVIGCGMPHLGRGHHGNFLVELRNVMAE CHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH VSGVRRLGSAALDLAYVAAGRMDGFWETGLSAWDIAAGLLLIREAGGFVSDMDGGQDMLD HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHC NGSVVAGNEVIQRALLKAVKKPLSAR CCCEEECHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968