| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is cat [H]
Identifier: 13472906
GI number: 13472906
Start: 2694078
End: 2694695
Strand: Direct
Name: cat [H]
Synonym: mlr3351
Alternate gene names: 13472906
Gene position: 2694078-2694695 (Clockwise)
Preceding gene: 13472905
Following gene: 13472907
Centisome position: 38.29
GC content: 65.86
Gene sequence:
>618_bases ATGACCAGGAAATTGTCAGAGACGCCGCTGGTCCACCCGACGGCGGAGGTGCACAATTCGACGCTCGGCCGCTGGACCGA GATCGCCGACCGCAGCCGGGTTTCGGAAAGCGAACTCGGCGACTATTCCTACATGATGCAGGATTGCTCTGTCTGGTGCG CGACAATCGGCAAGTTTGCAAACATTGCCGCCTCGGTGCGCCTCAACGCCACCAACCACCCGACCTGGCGGCCGACGCTG CACCACTTCACCTACCGCGCCTCGGACTATTGGGACGACGCCGAGCACGAGAGCGAATTCTTCGCCCAGCGCCGCGCCAA GCGCGTCACCATCGGCCACGACACCTGGCTCGGTCACGGCTCGACCGTCCTGCCGGGAGTCACTGTCGGCGATGGCGCGG CGGTTGGTGCCGGAGCGGTCGTCTCGAAGGATGTCGCGCCCTACACCATCGTCGCCGGCGTACCGGCCAAACCGATCCGC GAGCGCTTCGACCGCCGCACCGCCGAACGCTACCAGGTGCTTGCCTGGTGGGACTGGGACCACGCGCGGCTGCGCGCGTC GCTCGAGGATTTTCGCGAGCTGTCGGCAGAGGCATTCCTGGAGAAATACGGGGGATAG
Upstream 100 bases:
>100_bases GCGTCGCCTTGCTCGGCATCTTCCACGATCATGATGTGCGCGAGGCGGTAGCCGACCGCATCATCGACGTCACCGCTTTT GCTCCAGGAAAACTCGCCGC
Downstream 100 bases:
>100_bases TTCCTCACATCATCGTAATCAGGGGGGGCCCGTTCATATCCCTGACACAGGACTCGGACAGGACGCCATCTCCCCCAAGG AGATCGCCATGCTCGACACC
Product: acetyltransferase (virginiamycin, streptogramin A, chloramphenicol)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTRKLSETPLVHPTAEVHNSTLGRWTEIADRSRVSESELGDYSYMMQDCSVWCATIGKFANIAASVRLNATNHPTWRPTL HHFTYRASDYWDDAEHESEFFAQRRAKRVTIGHDTWLGHGSTVLPGVTVGDGAAVGAGAVVSKDVAPYTIVAGVPAKPIR ERFDRRTAERYQVLAWWDWDHARLRASLEDFRELSAEAFLEKYGG
Sequences:
>Translated_205_residues MTRKLSETPLVHPTAEVHNSTLGRWTEIADRSRVSESELGDYSYMMQDCSVWCATIGKFANIAASVRLNATNHPTWRPTL HHFTYRASDYWDDAEHESEFFAQRRAKRVTIGHDTWLGHGSTVLPGVTVGDGAAVGAGAVVSKDVAPYTIVAGVPAKPIR ERFDRRTAERYQVLAWWDWDHARLRASLEDFRELSAEAFLEKYGG >Mature_204_residues TRKLSETPLVHPTAEVHNSTLGRWTEIADRSRVSESELGDYSYMMQDCSVWCATIGKFANIAASVRLNATNHPTWRPTLH HFTYRASDYWDDAEHESEFFAQRRAKRVTIGHDTWLGHGSTVLPGVTVGDGAAVGAGAVVSKDVAPYTIVAGVPAKPIRE RFDRRTAERYQVLAWWDWDHARLRASLEDFRELSAEAFLEKYGG
Specific function: This enzyme is an effector of chloramphenicol resistance in bacteria [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1786537, Length=114, Percent_Identity=34.2105263157895, Blast_Score=74, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.28 [H]
Molecular weight: Translated: 23094; Mature: 22963
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKLSETPLVHPTAEVHNSTLGRWTEIADRSRVSESELGDYSYMMQDCSVWCATIGKFA CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHH NIAASVRLNATNHPTWRPTLHHFTYRASDYWDDAEHESEFFAQRRAKRVTIGHDTWLGHG HHHEEEEECCCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHCEEECCCCCCCCCC STVLPGVTVGDGAAVGAGAVVSKDVAPYTIVAGVPAKPIRERFDRRTAERYQVLAWWDWD CEECCCEEECCCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEEEEECCH HARLRASLEDFRELSAEAFLEKYGG HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TRKLSETPLVHPTAEVHNSTLGRWTEIADRSRVSESELGDYSYMMQDCSVWCATIGKFA CCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHH NIAASVRLNATNHPTWRPTLHHFTYRASDYWDDAEHESEFFAQRRAKRVTIGHDTWLGHG HHHEEEEECCCCCCCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHCEEECCCCCCCCCC STVLPGVTVGDGAAVGAGAVVSKDVAPYTIVAGVPAKPIRERFDRRTAERYQVLAWWDWD CEECCCEEECCCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEEEEECCH HARLRASLEDFRELSAEAFLEKYGG HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013403; 11743193; 11743194 [H]