| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472907
Identifier: 13472907
GI number: 13472907
Start: 2694508
End: 2695494
Strand: Direct
Name: 13472907
Synonym: mlr3352
Alternate gene names: NA
Gene position: 2694508-2695494 (Clockwise)
Preceding gene: 13472906
Following gene: 13472908
Centisome position: 38.3
GC content: 63.02
Gene sequence:
>987_bases ATGTCGCGCCCTACACCATCGTCGCCGGCGTACCGGCCAAACCGATCCGCGAGCGCTTCGACCGCCGCACCGCCGAACGC TACCAGGTGCTTGCCTGGTGGGACTGGGACCACGCGCGGCTGCGCGCGTCGCTCGAGGATTTTCGCGAGCTGTCGGCAGA GGCATTCCTGGAGAAATACGGGGGATAGTTCCTCACATCATCGTAATCAGGGGGGGCCCGTTCATATCCCTGACACAGGA CTCGGACAGGACGCCATCTCCCCCAAGGAGATCGCCATGCTCGACACCGTCAAACCCTCGCTCGCCGGATTCTTTGCCGG CTCCAACCCGGCCACCCCGGCGCATCTCGGCACGCGCTACGACATCTCAGGTAATTTCCTGACCGAGCCCGGCAACACGG TTGTCAGCCATCTCGTCAGCGGCTCGCCCTCCGAAGCCGTGGTCCTGGAGATCCGTGAGCGGATGCTCGCCATGCCCGAT GCCGACCGTCTGGCTTTCACCCCTGTTTCCAGCCTGCATATGACGCTGTTCCAGGGCATCATCGAATATCGTCGCCGCTT GCCCTACTGGCCGCAGGACGTGCCGCTAGACACCAGCATCGACGCCATGACCCGGCTCTATCTGGAGCGCCTGAAGGGCT TCGAGGGCTTCGGCCCGTTCAACATCAAGGTGGTCGAGGTCGTGCCGACCGGTCTCACCGTGGCAGGTGCAACCGACGAG GATGTGCGCATCATGCGTCAATGGCGCGATGCGCTGGCGGTGCCGTTCGGCTACCGGCACCCCGATCATGACGCCTACGT CTTCCACATCACCTTCGCCTATCAGATCCAGCGCCTTGCGGATGACCGTGCGGCAGCGTGGCAGGCTCTATTCGACGATT GCCTGGCGCTTTTCGCAAGGCAGGCACCGATAATCGAGATCAAGGCGCCCTCCTTCTGCGCTTTCCGCGACATGAAGCAT TTCGAGGAATTGCTGGTGCTCGGCTGA
Upstream 100 bases:
>100_bases ATCGGCCACGACACCTGGCTCGGTCACGGCTCGACCGTCCTGCCGGGAGTCACTGTCGGCGATGGCGCGGCGGTTGGTGC CGGAGCGGTCGTCTCGAAGG
Downstream 100 bases:
>100_bases TCGACGGCCAGGCACCAATGCATGTCGCCCGAAAGCGGCCCCGGTCTTGGGAGAACGACATGCATAAAACAAAGACCCGA AGCGCGTCGCATGAATTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSRPTPSSPAYRPNRSASASTAAPPNATRCLPGGTGTTRGCARRSRIFASCRQRHSWRNTGDSSSHHRNQGGPVHIPDTG LGQDAISPKEIAMLDTVKPSLAGFFAGSNPATPAHLGTRYDISGNFLTEPGNTVVSHLVSGSPSEAVVLEIRERMLAMPD ADRLAFTPVSSLHMTLFQGIIEYRRRLPYWPQDVPLDTSIDAMTRLYLERLKGFEGFGPFNIKVVEVVPTGLTVAGATDE DVRIMRQWRDALAVPFGYRHPDHDAYVFHITFAYQIQRLADDRAAAWQALFDDCLALFARQAPIIEIKAPSFCAFRDMKH FEELLVLG
Sequences:
>Translated_328_residues MSRPTPSSPAYRPNRSASASTAAPPNATRCLPGGTGTTRGCARRSRIFASCRQRHSWRNTGDSSSHHRNQGGPVHIPDTG LGQDAISPKEIAMLDTVKPSLAGFFAGSNPATPAHLGTRYDISGNFLTEPGNTVVSHLVSGSPSEAVVLEIRERMLAMPD ADRLAFTPVSSLHMTLFQGIIEYRRRLPYWPQDVPLDTSIDAMTRLYLERLKGFEGFGPFNIKVVEVVPTGLTVAGATDE DVRIMRQWRDALAVPFGYRHPDHDAYVFHITFAYQIQRLADDRAAAWQALFDDCLALFARQAPIIEIKAPSFCAFRDMKH FEELLVLG >Mature_327_residues SRPTPSSPAYRPNRSASASTAAPPNATRCLPGGTGTTRGCARRSRIFASCRQRHSWRNTGDSSSHHRNQGGPVHIPDTGL GQDAISPKEIAMLDTVKPSLAGFFAGSNPATPAHLGTRYDISGNFLTEPGNTVVSHLVSGSPSEAVVLEIRERMLAMPDA DRLAFTPVSSLHMTLFQGIIEYRRRLPYWPQDVPLDTSIDAMTRLYLERLKGFEGFGPFNIKVVEVVPTGLTVAGATDED VRIMRQWRDALAVPFGYRHPDHDAYVFHITFAYQIQRLADDRAAAWQALFDDCLALFARQAPIIEIKAPSFCAFRDMKHF EELLVLG
Specific function: Unknown
COG id: COG5255
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36192; Mature: 36061
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPTPSSPAYRPNRSASASTAAPPNATRCLPGGTGTTRGCARRSRIFASCRQRHSWRNT CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC GDSSSHHRNQGGPVHIPDTGLGQDAISPKEIAMLDTVKPSLAGFFAGSNPATPAHLGTRY CCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCEE DISGNFLTEPGNTVVSHLVSGSPSEAVVLEIRERMLAMPDADRLAFTPVSSLHMTLFQGI ECCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHH IEYRRRLPYWPQDVPLDTSIDAMTRLYLERLKGFEGFGPFNIKVVEVVPTGLTVAGATDE HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCH DVRIMRQWRDALAVPFGYRHPDHDAYVFHITFAYQIQRLADDRAAAWQALFDDCLALFAR HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QAPIIEIKAPSFCAFRDMKHFEELLVLG CCCEEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRPTPSSPAYRPNRSASASTAAPPNATRCLPGGTGTTRGCARRSRIFASCRQRHSWRNT CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCC GDSSSHHRNQGGPVHIPDTGLGQDAISPKEIAMLDTVKPSLAGFFAGSNPATPAHLGTRY CCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCEE DISGNFLTEPGNTVVSHLVSGSPSEAVVLEIRERMLAMPDADRLAFTPVSSLHMTLFQGI ECCCCEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHH IEYRRRLPYWPQDVPLDTSIDAMTRLYLERLKGFEGFGPFNIKVVEVVPTGLTVAGATDE HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCH DVRIMRQWRDALAVPFGYRHPDHDAYVFHITFAYQIQRLADDRAAAWQALFDDCLALFAR HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QAPIIEIKAPSFCAFRDMKHFEELLVLG CCCEEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA