| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126700495
Identifier: 126700495
GI number: 126700495
Start: 3368314
End: 3368778
Strand: Direct
Name: 126700495
Synonym: CD2879
Alternate gene names: NA
Gene position: 3368314-3368778 (Clockwise)
Preceding gene: 126700489
Following gene: 126700503
Centisome position: 78.51
GC content: 27.74
Gene sequence:
>465_bases ATGGTACATTTAGTATATTGTGATAATGCAGGAAAAAAAGGAGAAAAGGTCTTAGATAAAATCTTGGCTAGAACAAAAAC AATGGTTATTAGAGGTGCTGCTGGTAGAAAAATACCACATAGTAGAGTATTTGAAGATGAGTTACTTTATTTTATGGAAA AAGGAACTGCAAAAATATCTGCAAAAGCCACTGTTAAAAAGGTAGAAAACTATGTTAAATTAACAGAAGATGAAATTTCT AAAATTTTAAATGAAAATCAATCAAAATTAAATTTATCTGAAAAGCAAAAAGTTCGTTGGCATAAAAAATGTTTATGCTT AGTTGAATTTGAAAATGTTGAAGAAATAACACCTCTTGATTTTGACCATCAAGGAAATATGGATGATTGGCTTATTGTTG AAAAAATTGAAGATGTAGTTGTTGGTACTAGTATACCTTACAATTATGAGAAGTCTAAATTTTAA
Upstream 100 bases:
>100_bases TATTTTTTTTAAGAATTGGACACAAATACAATGACTTTTCAGTTAAACAATGATAAAATGCAATTTATAGATAAGGAATT TAGTAGGGAGGATTCAAAAC
Downstream 100 bases:
>100_bases AGTATCAATAACATAATACTATATTGCTAAACTCTACTTAAATAAAAAAAGAGTGCATTTAATAATTATAAAAATTATTT TTATACACTCTTTTTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MVHLVYCDNAGKKGEKVLDKILARTKTMVIRGAAGRKIPHSRVFEDELLYFMEKGTAKISAKATVKKVENYVKLTEDEIS KILNENQSKLNLSEKQKVRWHKKCLCLVEFENVEEITPLDFDHQGNMDDWLIVEKIEDVVVGTSIPYNYEKSKF
Sequences:
>Translated_154_residues MVHLVYCDNAGKKGEKVLDKILARTKTMVIRGAAGRKIPHSRVFEDELLYFMEKGTAKISAKATVKKVENYVKLTEDEIS KILNENQSKLNLSEKQKVRWHKKCLCLVEFENVEEITPLDFDHQGNMDDWLIVEKIEDVVVGTSIPYNYEKSKF >Mature_154_residues MVHLVYCDNAGKKGEKVLDKILARTKTMVIRGAAGRKIPHSRVFEDELLYFMEKGTAKISAKATVKKVENYVKLTEDEIS KILNENQSKLNLSEKQKVRWHKKCLCLVEFENVEEITPLDFDHQGNMDDWLIVEKIEDVVVGTSIPYNYEKSKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17792; Mature: 17792
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHLVYCDNAGKKGEKVLDKILARTKTMVIRGAAGRKIPHSRVFEDELLYFMEKGTAKIS CEEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEE AKATVKKVENYVKLTEDEISKILNENQSKLNLSEKQKVRWHKKCLCLVEFENVEEITPLD HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCC FDHQGNMDDWLIVEKIEDVVVGTSIPYNYEKSKF CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MVHLVYCDNAGKKGEKVLDKILARTKTMVIRGAAGRKIPHSRVFEDELLYFMEKGTAKIS CEEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEE AKATVKKVENYVKLTEDEISKILNENQSKLNLSEKQKVRWHKKCLCLVEFENVEEITPLD HHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCC FDHQGNMDDWLIVEKIEDVVVGTSIPYNYEKSKF CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA