| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is guaB [H]
Identifier: 126699953
GI number: 126699953
Start: 2700697
End: 2702196
Strand: Direct
Name: guaB [H]
Synonym: CD2335
Alternate gene names: 126699953
Gene position: 2700697-2702196 (Clockwise)
Preceding gene: 126699935
Following gene: 126699963
Centisome position: 62.95
GC content: 34.2
Gene sequence:
>1500_bases ATGGCGTTTTATTTTGATACACCATCACATACTTTCAGTGAATACCTTCTTGTACCAGGTTTCTCTTCTACTGATTGTAT ACCTGCTAATGTAAGTTTAAAAACACCTGTTACTAAATTTAAAAAGGGCGAGGAAGCAGATATTTATATGAATATACCTT TGACTTCTGCTATTATGCAATCTGTTTCTGATGACAAAATGGCTATTGCACTTGCTAAAGAAGGTGGTATTTCATTTATA TACGGTTCTCAAACTATTGAAAATGAAGCTGCTATGGTAGCACGTGTTAAATCCCACAAAGCTGGTTTTGTTGTAAGTGA TTCAAATATTAAACCTGATAACACATTAAAAGACATACTTGACTTAAAAGAAAAAACTGGACATTCTACAGTAGCTGTTA CTGAAGATGGAACTTCAACTGGTAAATTATTGGGTATTGTTGCAAGTCGTGATTATCGTATAAGTCGTATGGATTTAGAT ACTAAAGTTAGTGAATTTATGACTCCTATGTCATCTATAGTTTATGCTAACAAAGATGTTACTTTAAAGGAAGCAAACAA TATTATATGGGACCACAAACTTAATTCTCTTCCTGTACTTGATGATAATGGTAATCTTATGTATATGGTATTCCGTAAAG ATTACTCTTCTCATAAAGAAAATCCACTTGAACTTTTAGATTCTTCTAAGAGATATGTAGTTGGAGCTGGTATTAATACT AGAGACTTTGCTGAACGTGTTCCTGCTTTAGTTGAAGCTGGTGCTGATGTTTTATGTATAGATTCTTCAGAAGGTTTTTC TGAGTGGCAAAAAATAACACTTGATTTCATTCGTGAAAAATATGGTGATACAGTTAAGGTAGGAGCTGGAAATGTAGTTG ACCGCGAAGGATTCCTTTACCTAGCTGAAGCTGGTGCTGACTTCGTTAAAGTTGGTATTGGTGGTGGTTCTATATGTATA ACTCGTGAACAAAAAGGTATAGGACGTGGACAAGCTACTTCTATAATTGAAGTTGCTCAAGCTAGAGACGAATACTTTGA AAAAACAGGTATTTATATTCCAATTTGCTCTGATGGTGGTATCGTTTATGACCATCATATAACTTTAGCTTTAGCTATGG GTGCAGATTTTATAATGCTTGGTAGATACTTCTCTCGTTTTGATGAGAGTCCAACTAACAAAGTTAATATAAATGGTAGT TATATGAAAGAGTATTGGGGAGAAGGTTCTGCTCGTGCTAGAAACTGGCAAAGATATGACCTTGGTGGAGATAAGAAACT TTCTTTTGAAGAAGGTGTTGACTCTTATGTGCCTTATGCTGGTTCTTTGAAAGACAATGTAACTCTTTCTTTAAGTAAAG TTCGTTCTACTATGTGTAACTGTGGAGCACTTAGCATTCCTGAACTTCAAAAAAATGCTAAACTTACACTTGTATCTTCT ACTAGTATAGTTGAAGGTGGAGCTCATGATGTTATGTTAAAAGATAATAGAAATTTATAA
Upstream 100 bases:
>100_bases ATCTCAATATTTGACAAAATACTTTAATAAAATTAAAGAATAAGTTATAATTAATACTATCAATTATAAAAAGTATAAAA ATATAAGGAGTGATTAAAAA
Downstream 100 bases:
>100_bases TATAAATATACTTTAATCATTTAAACAATGAAAAAGAGACTTATCTCTATTTTGAGACAGTCTCTTTTTATATTAGTATA ATTTTTATTTAACTGTAAAT
Product: inosine 5-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MAFYFDTPSHTFSEYLLVPGFSSTDCIPANVSLKTPVTKFKKGEEADIYMNIPLTSAIMQSVSDDKMAIALAKEGGISFI YGSQTIENEAAMVARVKSHKAGFVVSDSNIKPDNTLKDILDLKEKTGHSTVAVTEDGTSTGKLLGIVASRDYRISRMDLD TKVSEFMTPMSSIVYANKDVTLKEANNIIWDHKLNSLPVLDDNGNLMYMVFRKDYSSHKENPLELLDSSKRYVVGAGINT RDFAERVPALVEAGADVLCIDSSEGFSEWQKITLDFIREKYGDTVKVGAGNVVDREGFLYLAEAGADFVKVGIGGGSICI TREQKGIGRGQATSIIEVAQARDEYFEKTGIYIPICSDGGIVYDHHITLALAMGADFIMLGRYFSRFDESPTNKVNINGS YMKEYWGEGSARARNWQRYDLGGDKKLSFEEGVDSYVPYAGSLKDNVTLSLSKVRSTMCNCGALSIPELQKNAKLTLVSS TSIVEGGAHDVMLKDNRNL
Sequences:
>Translated_499_residues MAFYFDTPSHTFSEYLLVPGFSSTDCIPANVSLKTPVTKFKKGEEADIYMNIPLTSAIMQSVSDDKMAIALAKEGGISFI YGSQTIENEAAMVARVKSHKAGFVVSDSNIKPDNTLKDILDLKEKTGHSTVAVTEDGTSTGKLLGIVASRDYRISRMDLD TKVSEFMTPMSSIVYANKDVTLKEANNIIWDHKLNSLPVLDDNGNLMYMVFRKDYSSHKENPLELLDSSKRYVVGAGINT RDFAERVPALVEAGADVLCIDSSEGFSEWQKITLDFIREKYGDTVKVGAGNVVDREGFLYLAEAGADFVKVGIGGGSICI TREQKGIGRGQATSIIEVAQARDEYFEKTGIYIPICSDGGIVYDHHITLALAMGADFIMLGRYFSRFDESPTNKVNINGS YMKEYWGEGSARARNWQRYDLGGDKKLSFEEGVDSYVPYAGSLKDNVTLSLSKVRSTMCNCGALSIPELQKNAKLTLVSS TSIVEGGAHDVMLKDNRNL >Mature_498_residues AFYFDTPSHTFSEYLLVPGFSSTDCIPANVSLKTPVTKFKKGEEADIYMNIPLTSAIMQSVSDDKMAIALAKEGGISFIY GSQTIENEAAMVARVKSHKAGFVVSDSNIKPDNTLKDILDLKEKTGHSTVAVTEDGTSTGKLLGIVASRDYRISRMDLDT KVSEFMTPMSSIVYANKDVTLKEANNIIWDHKLNSLPVLDDNGNLMYMVFRKDYSSHKENPLELLDSSKRYVVGAGINTR DFAERVPALVEAGADVLCIDSSEGFSEWQKITLDFIREKYGDTVKVGAGNVVDREGFLYLAEAGADFVKVGIGGGSICIT REQKGIGRGQATSIIEVAQARDEYFEKTGIYIPICSDGGIVYDHHITLALAMGADFIMLGRYFSRFDESPTNKVNINGSY MKEYWGEGSARARNWQRYDLGGDKKLSFEEGVDSYVPYAGSLKDNVTLSLSKVRSTMCNCGALSIPELQKNAKLTLVSST SIVEGGAHDVMLKDNRNL
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI156616279, Length=499, Percent_Identity=34.6693386773547, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI217035146, Length=499, Percent_Identity=34.6693386773547, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI34328930, Length=499, Percent_Identity=34.6693386773547, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI34328928, Length=499, Percent_Identity=34.6693386773547, Blast_Score=254, Evalue=9e-68, Organism=Homo sapiens, GI217035152, Length=497, Percent_Identity=34.8088531187123, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI217035148, Length=499, Percent_Identity=34.0681362725451, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI66933016, Length=499, Percent_Identity=32.064128256513, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI217035150, Length=499, Percent_Identity=32.6653306613226, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI156104880, Length=237, Percent_Identity=32.9113924050633, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI50541956, Length=273, Percent_Identity=30.03663003663, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI50541954, Length=273, Percent_Identity=30.03663003663, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI50541952, Length=273, Percent_Identity=30.03663003663, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI50541948, Length=273, Percent_Identity=30.03663003663, Blast_Score=102, Evalue=6e-22, Organism=Escherichia coli, GI1788855, Length=494, Percent_Identity=36.0323886639676, Blast_Score=221, Evalue=8e-59, Organism=Escherichia coli, GI1786293, Length=253, Percent_Identity=32.0158102766798, Blast_Score=97, Evalue=2e-21, Organism=Caenorhabditis elegans, GI71994385, Length=510, Percent_Identity=32.5490196078431, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71994389, Length=425, Percent_Identity=34.8235294117647, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17560440, Length=257, Percent_Identity=30.3501945525292, Blast_Score=105, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6323585, Length=506, Percent_Identity=34.3873517786561, Blast_Score=240, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6323464, Length=504, Percent_Identity=34.1269841269841, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6322012, Length=504, Percent_Identity=32.9365079365079, Blast_Score=229, Evalue=1e-60, Organism=Saccharomyces cerevisiae, GI6319352, Length=381, Percent_Identity=34.3832020997375, Blast_Score=186, Evalue=7e-48, Organism=Drosophila melanogaster, GI24641071, Length=501, Percent_Identity=32.5349301397206, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24641073, Length=501, Percent_Identity=32.5349301397206, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI28571163, Length=453, Percent_Identity=33.112582781457, Blast_Score=211, Evalue=1e-54,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 54778; Mature: 54646
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFYFDTPSHTFSEYLLVPGFSSTDCIPANVSLKTPVTKFKKGEEADIYMNIPLTSAIMQ CEEEECCCCCCCCCEEEECCCCCCCCEECCEEECCCHHHHCCCCCCEEEEECCHHHHHHH SVSDDKMAIALAKEGGISFIYGSQTIENEAAMVARVKSHKAGFVVSDSNIKPDNTLKDIL HCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH DLKEKTGHSTVAVTEDGTSTGKLLGIVASRDYRISRMDLDTKVSEFMTPMSSIVYANKDV HHHHHCCCCEEEEECCCCCCCEEEEEEECCCEEEEEECCHHHHHHHHCHHHHHEECCCCE TLKEANNIIWDHKLNSLPVLDDNGNLMYMVFRKDYSSHKENPLELLDSSKRYVVGAGINT EEECCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCH RDFAERVPALVEAGADVLCIDSSEGFSEWQKITLDFIREKYGDTVKVGAGNVVDREGFLY HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCCCEECCCCEEE LAEAGADFVKVGIGGGSICITREQKGIGRGQATSIIEVAQARDEYFEKTGIYIPICSDGG EEECCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC IVYDHHITLALAMGADFIMLGRYFSRFDESPTNKVNINGSYMKEYWGEGSARARNWQRYD EEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCCCCEEEC LGGDKKLSFEEGVDSYVPYAGSLKDNVTLSLSKVRSTMCNCGALSIPELQKNAKLTLVSS CCCCCCCCHHHCCHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHCCCCEEEEEEC TSIVEGGAHDVMLKDNRNL CCEECCCCCEEEEECCCCC >Mature Secondary Structure AFYFDTPSHTFSEYLLVPGFSSTDCIPANVSLKTPVTKFKKGEEADIYMNIPLTSAIMQ EEEECCCCCCCCCEEEECCCCCCCCEECCEEECCCHHHHCCCCCCEEEEECCHHHHHHH SVSDDKMAIALAKEGGISFIYGSQTIENEAAMVARVKSHKAGFVVSDSNIKPDNTLKDIL HCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH DLKEKTGHSTVAVTEDGTSTGKLLGIVASRDYRISRMDLDTKVSEFMTPMSSIVYANKDV HHHHHCCCCEEEEECCCCCCCEEEEEEECCCEEEEEECCHHHHHHHHCHHHHHEECCCCE TLKEANNIIWDHKLNSLPVLDDNGNLMYMVFRKDYSSHKENPLELLDSSKRYVVGAGINT EEECCCCEEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCH RDFAERVPALVEAGADVLCIDSSEGFSEWQKITLDFIREKYGDTVKVGAGNVVDREGFLY HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCCCEECCCCEEE LAEAGADFVKVGIGGGSICITREQKGIGRGQATSIIEVAQARDEYFEKTGIYIPICSDGG EEECCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC IVYDHHITLALAMGADFIMLGRYFSRFDESPTNKVNINGSYMKEYWGEGSARARNWQRYD EEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCCCCEEEC LGGDKKLSFEEGVDSYVPYAGSLKDNVTLSLSKVRSTMCNCGALSIPELQKNAKLTLVSS CCCCCCCCHHHCCHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHCCCCEEEEEEC TSIVEGGAHDVMLKDNRNL CCEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]