Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126699907

Identifier: 126699907

GI number: 126699907

Start: 2659171

End: 2659584

Strand: Direct

Name: 126699907

Synonym: CD2292

Alternate gene names: NA

Gene position: 2659171-2659584 (Clockwise)

Preceding gene: 126699906

Following gene: 126699908

Centisome position: 61.98

GC content: 24.4

Gene sequence:

>414_bases
ATGAAAGTAAAGAGTAAACGAAGTTTTATAGTGGGTATTATAGTTTGTGTGTTATGTTGTGCTAGTTTAGTTATTTATTG
CATTTTAAAAGATAAAAGATTCCTAATTTCATCATTTCTTTTAATTGTAATAGCAATCTTTAATTTTTGTAATGCTTTTT
CAAGAAAAGGCATTGTTGAAGAATTACACGATAGTACAGATGAAAGAGACTTGTACTTAACAATGAAAACAAGTCATATC
TTAGTTAAAATTATGAATTATACATTATTTACTTTTACATTTCTTTTCATCATAGCTTATAGTGCATGGAAAAATCAATC
ACTTCTAGTTATAGCTATAACACTATGTGTCATTGAGATTTTTTTATTTGTTGCATATTTACTTATCAATATATTTTTAG
AGAAAAAAGAGTAA

Upstream 100 bases:

>100_bases
CCTTCTCTTATGCTTGCCTATCGTATGGCACAAGTGTTTGGTACAACGATTGAAGAACTATGTTGTTTAAAAGAAAATAA
AGAAATGGAGGATAAAAAAC

Downstream 100 bases:

>100_bases
ATACAAGGGGTGATATAAATGTATTTTAAAACTTATATACTAAAAAGAGAAGTAAATAACAAACAACTAGAGATAACTCG
AAGTTTTGACTTAGATAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKVKSKRSFIVGIIVCVLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVEELHDSTDERDLYLTMKTSHI
LVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEIFLFVAYLLINIFLEKKE

Sequences:

>Translated_137_residues
MKVKSKRSFIVGIIVCVLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVEELHDSTDERDLYLTMKTSHI
LVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEIFLFVAYLLINIFLEKKE
>Mature_137_residues
MKVKSKRSFIVGIIVCVLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVEELHDSTDERDLYLTMKTSHI
LVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEIFLFVAYLLINIFLEKKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15883; Mature: 15883

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKSKRSFIVGIIVCVLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ELHDSTDERDLYLTMKTSHILVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEI
HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FLFVAYLLINIFLEKKE
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVKSKRSFIVGIIVCVLCCASLVIYCILKDKRFLISSFLLIVIAIFNFCNAFSRKGIVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ELHDSTDERDLYLTMKTSHILVKIMNYTLFTFTFLFIIAYSAWKNQSLLVIAITLCVIEI
HHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FLFVAYLLINIFLEKKE
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA