| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is argG
Identifier: 126699394
GI number: 126699394
Start: 2067107
End: 2068306
Strand: Direct
Name: argG
Synonym: CD1785
Alternate gene names: 126699394
Gene position: 2067107-2068306 (Clockwise)
Preceding gene: 126699393
Following gene: 126699395
Centisome position: 48.18
GC content: 31.33
Gene sequence:
>1200_bases ATGAAGGAAAAAGTAGTATTAGCATATTCAGGAGGACTTGACACATCAATCATAATACCTTGGTTAAAGGAAAATTATGA AGATATAGATGTTATAGCTGTTTGTGGAAATGTAGGTCAGGAAGATAAAATGGAAGATGTATATGAAAAAGCTTTACAAA GTGGAGCATCAAAGGCATATGTGGATGATATAAGTGAAGAATTTGTAACTGAAACTATATTTAAAGCCGTAAAAGCAGAG GCTAAATATGAAGGAAAATACTTATTAGGAACTTCTTTAGCAAGACCTATAATAGCTAAAAAATTAGTTGAAGTTGCTCA TAAAGAAGGTGCAAAATATATATGCCATGGATGTACAGGAAAAGGTAATGACCAAGTTAGATTTGAAGCTACAATTGCAG CTCTTGACCCAACTATAAAAGTTATTGCACCTTGGAGAATTTGGGATATAAAATCAAGAGAAGATGCTATAGACTATGCT GAAAAACATAATATAAAGGTAACAGCAACTAAAGCTAAAATATATTCAGTAGATGCTAACCTTTGGCATGTTTCAACAGA AGGTGGAGATATAGAGCACCTAGAAAATGAACATAAAAAAGATGTTTATAAACAATGTGTAGACCCAGAAGATGCATGTG ATGTAGCTGAATATGTAGAAGTTTACTTTGAAAAAGGTGTACCTAAAAAGGTAAATGGCGAAGAATTATCTCCAGTTGCA CTGATTCATAAGTTAAATGAGTTGGGTTGTAAACATGGAATTGGTGTTATAGATATAGTTGAGAATAGACTTGTTGGTAT GAAATCAAGAGGTATATATGAGACTCCAGGAGGAACAATCCTTTATGAAGCACATAATATTTTAGAAAGTGCTACTTTAG ACAAAGATACATTACATTTCAAACAAATGGTATCTTATAAATACGGAGAACTTATTTACAATGGACTATGGTATTGTAAA TTAAGAGAATCTATAGATGCATTTATGGAACAAACTCAAGATAATGTTACAGGAACAGTAAAAGTTAAACTTTACAAAGG AAATATAAAACCTGCTGGAATATTTACTGAAAATGCTCTTTATGATGAAGGAATATCTTCTTTTGGAAATAGTGAACTTT ATGACCACAAAGATGCAGAAGGATTTATTAATTTATTCACTTTACCATTAAAAATCAGAGCTATGAAAGCTGGAAAATAA
Upstream 100 bases:
>100_bases TATTAAAATGATTTTATGTGAGTCTAAATTCTCAGAGTCATTCAATATTAAGAATTTCTATAAAATAAAAATTATAATTT AAGATTGGGAGGAATTAAAA
Downstream 100 bases:
>100_bases TAAAATAAATTATTTAAGAGTGTATAAAAACTATTTTTAGGTTTTTATATGCTCTTTTTTTATTTGAATTTATTAAATTA TATAGTAAATAGTATAAAAA
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKEKVVLAYSGGLDTSIIIPWLKENYEDIDVIAVCGNVGQEDKMEDVYEKALQSGASKAYVDDISEEFVTETIFKAVKAE AKYEGKYLLGTSLARPIIAKKLVEVAHKEGAKYICHGCTGKGNDQVRFEATIAALDPTIKVIAPWRIWDIKSREDAIDYA EKHNIKVTATKAKIYSVDANLWHVSTEGGDIEHLENEHKKDVYKQCVDPEDACDVAEYVEVYFEKGVPKKVNGEELSPVA LIHKLNELGCKHGIGVIDIVENRLVGMKSRGIYETPGGTILYEAHNILESATLDKDTLHFKQMVSYKYGELIYNGLWYCK LRESIDAFMEQTQDNVTGTVKVKLYKGNIKPAGIFTENALYDEGISSFGNSELYDHKDAEGFINLFTLPLKIRAMKAGK
Sequences:
>Translated_399_residues MKEKVVLAYSGGLDTSIIIPWLKENYEDIDVIAVCGNVGQEDKMEDVYEKALQSGASKAYVDDISEEFVTETIFKAVKAE AKYEGKYLLGTSLARPIIAKKLVEVAHKEGAKYICHGCTGKGNDQVRFEATIAALDPTIKVIAPWRIWDIKSREDAIDYA EKHNIKVTATKAKIYSVDANLWHVSTEGGDIEHLENEHKKDVYKQCVDPEDACDVAEYVEVYFEKGVPKKVNGEELSPVA LIHKLNELGCKHGIGVIDIVENRLVGMKSRGIYETPGGTILYEAHNILESATLDKDTLHFKQMVSYKYGELIYNGLWYCK LRESIDAFMEQTQDNVTGTVKVKLYKGNIKPAGIFTENALYDEGISSFGNSELYDHKDAEGFINLFTLPLKIRAMKAGK >Mature_399_residues MKEKVVLAYSGGLDTSIIIPWLKENYEDIDVIAVCGNVGQEDKMEDVYEKALQSGASKAYVDDISEEFVTETIFKAVKAE AKYEGKYLLGTSLARPIIAKKLVEVAHKEGAKYICHGCTGKGNDQVRFEATIAALDPTIKVIAPWRIWDIKSREDAIDYA EKHNIKVTATKAKIYSVDANLWHVSTEGGDIEHLENEHKKDVYKQCVDPEDACDVAEYVEVYFEKGVPKKVNGEELSPVA LIHKLNELGCKHGIGVIDIVENRLVGMKSRGIYETPGGTILYEAHNILESATLDKDTLHFKQMVSYKYGELIYNGLWYCK LRESIDAFMEQTQDNVTGTVKVKLYKGNIKPAGIFTENALYDEGISSFGNSELYDHKDAEGFINLFTLPLKIRAMKAGK
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily
Homologues:
Organism=Homo sapiens, GI53759107, Length=399, Percent_Identity=46.1152882205514, Blast_Score=338, Evalue=4e-93, Organism=Homo sapiens, GI16950633, Length=399, Percent_Identity=46.1152882205514, Blast_Score=338, Evalue=4e-93, Organism=Escherichia coli, GI1789563, Length=369, Percent_Identity=28.4552845528455, Blast_Score=139, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6324514, Length=406, Percent_Identity=42.6108374384236, Blast_Score=293, Evalue=3e-80, Organism=Drosophila melanogaster, GI21358151, Length=413, Percent_Identity=41.6464891041162, Blast_Score=292, Evalue=3e-79,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ASSY_CLOD6 (Q186Z6)
Other databases:
- EMBL: AM180355 - RefSeq: YP_001088291.1 - ProteinModelPortal: Q186Z6 - SMR: Q186Z6 - STRING: Q186Z6 - GeneID: 4914984 - GenomeReviews: AM180355_GR - KEGG: cdf:CD1785 - NMPDR: fig|1496.1.peg.3022 - eggNOG: COG0137 - HOGENOM: HBG335267 - OMA: VAVDVGQ - ProtClustDB: PRK00509 - GO: GO:0005737 - HAMAP: MF_00005 - InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11587 - TIGRFAMs: TIGR00032
Pfam domain/function: PF00764 Arginosuc_synth
EC number: =6.3.4.5
Molecular weight: Translated: 44624; Mature: 44624
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1; PS00565 ARGININOSUCCIN_SYN_2
Important sites: BINDING 87-87 BINDING 92-92 BINDING 117-117 BINDING 119-119 BINDING 123-123 BINDING 123-123 BINDING 124-124 BINDING 127-127 BINDING 176-176 BINDING 185-185 BINDING 261-261 BINDING 273-273
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKVVLAYSGGLDTSIIIPWLKENYEDIDVIAVCGNVGQEDKMEDVYEKALQSGASKAY CCCCEEEEECCCCCCEEEEEHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHH VDDISEEFVTETIFKAVKAEAKYEGKYLLGTSLARPIIAKKLVEVAHKEGAKYICHGCTG HHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCC KGNDQVRFEATIAALDPTIKVIAPWRIWDIKSREDAIDYAEKHNIKVTATKAKIYSVDAN CCCCEEEEEEEEEEECCCEEEEECEEEEECCCCHHHHHHHHHCCEEEEEEEEEEEEECCC LWHVSTEGGDIEHLENEHKKDVYKQCVDPEDACDVAEYVEVYFEKGVPKKVNGEELSPVA EEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LIHKLNELGCKHGIGVIDIVENRLVGMKSRGIYETPGGTILYEAHNILESATLDKDTLHF HHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCEECCCCEEEEHHHHHHHHHCCCHHHHHH KQMVSYKYGELIYNGLWYCKLRESIDAFMEQTQDNVTGTVKVKLYKGNIKPAGIFTENAL HHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEECCHH YDEGISSFGNSELYDHKDAEGFINLFTLPLKIRAMKAGK HHHHHHHCCCCCCCCCCCCCCEEEEEEECEEEEEECCCC >Mature Secondary Structure MKEKVVLAYSGGLDTSIIIPWLKENYEDIDVIAVCGNVGQEDKMEDVYEKALQSGASKAY CCCCEEEEECCCCCCEEEEEHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHH VDDISEEFVTETIFKAVKAEAKYEGKYLLGTSLARPIIAKKLVEVAHKEGAKYICHGCTG HHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCC KGNDQVRFEATIAALDPTIKVIAPWRIWDIKSREDAIDYAEKHNIKVTATKAKIYSVDAN CCCCEEEEEEEEEEECCCEEEEECEEEEECCCCHHHHHHHHHCCEEEEEEEEEEEEECCC LWHVSTEGGDIEHLENEHKKDVYKQCVDPEDACDVAEYVEVYFEKGVPKKVNGEELSPVA EEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH LIHKLNELGCKHGIGVIDIVENRLVGMKSRGIYETPGGTILYEAHNILESATLDKDTLHF HHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCEECCCCEEEEHHHHHHHHHCCCHHHHHH KQMVSYKYGELIYNGLWYCKLRESIDAFMEQTQDNVTGTVKVKLYKGNIKPAGIFTENAL HHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEECCHH YDEGISSFGNSELYDHKDAEGFINLFTLPLKIRAMKAGK HHHHHHHCCCCCCCCCCCCCCEEEEEEECEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA