| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126699395
Identifier: 126699395
GI number: 126699395
Start: 2068553
End: 2069599
Strand: Direct
Name: 126699395
Synonym: CD1786
Alternate gene names: NA
Gene position: 2068553-2069599 (Clockwise)
Preceding gene: 126699394
Following gene: 126699396
Centisome position: 48.22
GC content: 28.65
Gene sequence:
>1047_bases ATGAGAAAAATAATTGAAATTAAACATCATTCACATGATTATGAGTGTATGTGGAATGGTATAGAAGATTTATATATAAA TAAAACCGGTGAATACCTTCCAAACGATTTTTTCTTTTTACTGTCAGGTTTTGGTTCATTTTGTTATATGAAAACAAATA AAGCTGATTTGAAAAGAATGGTAGCTTTGGGAGATGGAAGGACAAAACAGATGTATAAATTTTTAGCACCAATTGTTGGA TTTGAATACAAACATCATGAGTTTAAAAAGTATGAGCAAGCATTAAAGAAAGCAAAATCTGAAATTGATGATGGATATCC AGTTATTTTAGGAGCTTTAGATATGTATTATCTACCATATTATAAGAAGCTATATCATAAAGAACATATTCCTTTTCATT ATATATTAATGGTAGGATATGATGATGAAGGAATATATCTGTATGATTGTGGTAGAACAGAATTATTACATCTTTCTTAT GATAAATTACGTGAAAGCATGAATTGCAATTCCCCTGGATTAAGCAAAGAAAATACTATTTGCACAATAAGAATGAATAC TTCAAAGAATAAATATAACATTGCTAGAGAAGCTATTGCTATAAAGCGTGATATGTTTTTAAATCCACCTAAAGGATTTT TGGGATATAAAGGTTTTGAAAAGTTTATTAAAGAGTTGCCACAGTGGAACACTGAATTGGATAAAGATGATTATGATAAG ATTTTGACCAATATGGTTATGTTTTTTGGAACAGTACCAACAATTCCAAATGCAATCAAAGGAATTAAAGAACCAGATAC TGTTCAATTTAAAGGTGGATTTGATAAAATGAGTAGAATGCTCAACAGTATTGGGGAGGAATACAAAAACGACTCTTTTA TACAAGTAGCTGATATTTTTGATAAAACTGCTATTATAATTGAGAAAATATCCAATATTATAATAGATTATTTAACTCAA ACATGTGATGATACAGAACAACTTCCGTTATTGTTCTCTGAGGTCTTAGAGCATATGAAAACAGGATATTTAATCTTGGA TGTATAA
Upstream 100 bases:
>100_bases CTAAAATATAAATTTTATAAATACAATAGTTATTGACTCTCTCATTGTAAGAGGGTTTATACTGAATCTAATGAAAATTT ATAGTGAGGAGATAGATTAT
Downstream 100 bases:
>100_bases AAAATATATTGTTGACCCTAACATTACGTAATAGTGTAATATGAAAATATAGCTTGAATATATTAGTAGGTATTGATGGC TGTAAAATTAAAATTTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MRKIIEIKHHSHDYECMWNGIEDLYINKTGEYLPNDFFFLLSGFGSFCYMKTNKADLKRMVALGDGRTKQMYKFLAPIVG FEYKHHEFKKYEQALKKAKSEIDDGYPVILGALDMYYLPYYKKLYHKEHIPFHYILMVGYDDEGIYLYDCGRTELLHLSY DKLRESMNCNSPGLSKENTICTIRMNTSKNKYNIAREAIAIKRDMFLNPPKGFLGYKGFEKFIKELPQWNTELDKDDYDK ILTNMVMFFGTVPTIPNAIKGIKEPDTVQFKGGFDKMSRMLNSIGEEYKNDSFIQVADIFDKTAIIIEKISNIIIDYLTQ TCDDTEQLPLLFSEVLEHMKTGYLILDV
Sequences:
>Translated_348_residues MRKIIEIKHHSHDYECMWNGIEDLYINKTGEYLPNDFFFLLSGFGSFCYMKTNKADLKRMVALGDGRTKQMYKFLAPIVG FEYKHHEFKKYEQALKKAKSEIDDGYPVILGALDMYYLPYYKKLYHKEHIPFHYILMVGYDDEGIYLYDCGRTELLHLSY DKLRESMNCNSPGLSKENTICTIRMNTSKNKYNIAREAIAIKRDMFLNPPKGFLGYKGFEKFIKELPQWNTELDKDDYDK ILTNMVMFFGTVPTIPNAIKGIKEPDTVQFKGGFDKMSRMLNSIGEEYKNDSFIQVADIFDKTAIIIEKISNIIIDYLTQ TCDDTEQLPLLFSEVLEHMKTGYLILDV >Mature_348_residues MRKIIEIKHHSHDYECMWNGIEDLYINKTGEYLPNDFFFLLSGFGSFCYMKTNKADLKRMVALGDGRTKQMYKFLAPIVG FEYKHHEFKKYEQALKKAKSEIDDGYPVILGALDMYYLPYYKKLYHKEHIPFHYILMVGYDDEGIYLYDCGRTELLHLSY DKLRESMNCNSPGLSKENTICTIRMNTSKNKYNIAREAIAIKRDMFLNPPKGFLGYKGFEKFIKELPQWNTELDKDDYDK ILTNMVMFFGTVPTIPNAIKGIKEPDTVQFKGGFDKMSRMLNSIGEEYKNDSFIQVADIFDKTAIIIEKISNIIIDYLTQ TCDDTEQLPLLFSEVLEHMKTGYLILDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40699; Mature: 40699
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIIEIKHHSHDYECMWNGIEDLYINKTGEYLPNDFFFLLSGFGSFCYMKTNKADLKRM CCCEEEECCCCCCHHHHHCCCHHEEECCCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHH VALGDGRTKQMYKFLAPIVGFEYKHHEFKKYEQALKKAKSEIDDGYPVILGALDMYYLPY HHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH YKKLYHKEHIPFHYILMVGYDDEGIYLYDCGRTELLHLSYDKLRESMNCNSPGLSKENTI HHHHHHCCCCCEEEEEEEEECCCCEEEEECCCCEEEECCHHHHHHHCCCCCCCCCCCCCE CTIRMNTSKNKYNIAREAIAIKRDMFLNPPKGFLGYKGFEKFIKELPQWNTELDKDDYDK EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH ILTNMVMFFGTVPTIPNAIKGIKEPDTVQFKGGFDKMSRMLNSIGEEYKNDSFIQVADIF HHHHHHHHHCCCCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHH DKTAIIIEKISNIIIDYLTQTCDDTEQLPLLFSEVLEHMKTGYLILDV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEC >Mature Secondary Structure MRKIIEIKHHSHDYECMWNGIEDLYINKTGEYLPNDFFFLLSGFGSFCYMKTNKADLKRM CCCEEEECCCCCCHHHHHCCCHHEEECCCCCCCCCHHHHHHHCCCCEEEEECCHHHHHHH VALGDGRTKQMYKFLAPIVGFEYKHHEFKKYEQALKKAKSEIDDGYPVILGALDMYYLPY HHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH YKKLYHKEHIPFHYILMVGYDDEGIYLYDCGRTELLHLSYDKLRESMNCNSPGLSKENTI HHHHHHCCCCCEEEEEEEEECCCCEEEEECCCCEEEECCHHHHHHHCCCCCCCCCCCCCE CTIRMNTSKNKYNIAREAIAIKRDMFLNPPKGFLGYKGFEKFIKELPQWNTELDKDDYDK EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH ILTNMVMFFGTVPTIPNAIKGIKEPDTVQFKGGFDKMSRMLNSIGEEYKNDSFIQVADIF HHHHHHHHHCCCCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEHHHHH DKTAIIIEKISNIIIDYLTQTCDDTEQLPLLFSEVLEHMKTGYLILDV HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA