| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
Click here to switch to the map view.
The map label for this gene is 126698206
Identifier: 126698206
GI number: 126698206
Start: 751541
End: 752122
Strand: Direct
Name: 126698206
Synonym: CD0628
Alternate gene names: NA
Gene position: 751541-752122 (Clockwise)
Preceding gene: 126698205
Following gene: 126698209
Centisome position: 17.52
GC content: 30.76
Gene sequence:
>582_bases ATGAATAATAAAAAACATTGGTATGACTATTTATGGATTTTTTCTTCAATATATTTGATATTGGGATTTGTAAATATTAT TTTCGCTTGGATTGGGCTAATTTGTTTCTTTGTTCCACTAGCTATTTCTATTGTTAAGGGAAATAAAGCTTACTGTAATA AGTATTGTGGAAGAGGGCAACTGTTTAATTTGCTTGGAAATAAATTGAAGCTGTCAAGAAATAGAGATATTCCTAAATTT ATTAGAAGTAAGTGGTTTAGATATGGGTTTTTGACATTTTTTATGGTAATGTTTGCTAATATGCTTTTTTCAACTTATTT AGTGTTTGAAGGAAGTAGAAATTTTAAAGAAGTAGTGACTTTGTTGTGGACTATAAAAATGCCTTGGCAATGGGCGTATC ATGGAACTTTAGTTTCACCTTGGGTGGTACAGTTTGCATTTGGTTTTTATAGTGTTATGCTTACATCAACTGTTCTTGGT TTGATTACTATGATATTGTTTAAACCTCGTTCATGGTGTGTTTATTGCCCTATGGGTACTATGACTCAGATGATATGTAA GGCAAAGAGTAAGTCTATATAG
Upstream 100 bases:
>100_bases AATAGAGATTTATGTGTTGGATGTGGGATTTGTGAAAAGATATGTCCAGCATCTGTAATTGAGATTATAACAATATTAAA AGAGGAAGAAGGTAAGTGTC
Downstream 100 bases:
>100_bases AAAGGCTTTATGTGATATTTACAGTTTTGTTAGAGATGAGTAGTAGGTTTGAATATATATGACAAATATATGAGTATAGG GGCATAGATTTAGTTTGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNNKKHWYDYLWIFSSIYLILGFVNIIFAWIGLICFFVPLAISIVKGNKAYCNKYCGRGQLFNLLGNKLKLSRNRDIPKF IRSKWFRYGFLTFFMVMFANMLFSTYLVFEGSRNFKEVVTLLWTIKMPWQWAYHGTLVSPWVVQFAFGFYSVMLTSTVLG LITMILFKPRSWCVYCPMGTMTQMICKAKSKSI
Sequences:
>Translated_193_residues MNNKKHWYDYLWIFSSIYLILGFVNIIFAWIGLICFFVPLAISIVKGNKAYCNKYCGRGQLFNLLGNKLKLSRNRDIPKF IRSKWFRYGFLTFFMVMFANMLFSTYLVFEGSRNFKEVVTLLWTIKMPWQWAYHGTLVSPWVVQFAFGFYSVMLTSTVLG LITMILFKPRSWCVYCPMGTMTQMICKAKSKSI >Mature_193_residues MNNKKHWYDYLWIFSSIYLILGFVNIIFAWIGLICFFVPLAISIVKGNKAYCNKYCGRGQLFNLLGNKLKLSRNRDIPKF IRSKWFRYGFLTFFMVMFANMLFSTYLVFEGSRNFKEVVTLLWTIKMPWQWAYHGTLVSPWVVQFAFGFYSVMLTSTVLG LITMILFKPRSWCVYCPMGTMTQMICKAKSKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22756; Mature: 22756
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKKHWYDYLWIFSSIYLILGFVNIIFAWIGLICFFVPLAISIVKGNKAYCNKYCGRGQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHH LFNLLGNKLKLSRNRDIPKFIRSKWFRYGFLTFFMVMFANMLFSTYLVFEGSRNFKEVVT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LLWTIKMPWQWAYHGTLVSPWVVQFAFGFYSVMLTSTVLGLITMILFKPRSWCVYCPMGT HHHHHCCCCEEHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHH MTQMICKAKSKSI HHHHHHHHHCCCC >Mature Secondary Structure MNNKKHWYDYLWIFSSIYLILGFVNIIFAWIGLICFFVPLAISIVKGNKAYCNKYCGRGQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHH LFNLLGNKLKLSRNRDIPKFIRSKWFRYGFLTFFMVMFANMLFSTYLVFEGSRNFKEVVT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LLWTIKMPWQWAYHGTLVSPWVVQFAFGFYSVMLTSTVLGLITMILFKPRSWCVYCPMGT HHHHHCCCCEEHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHH MTQMICKAKSKSI HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA