Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is orf23

Identifier: 126698072

GI number: 126698072

Start: 585695

End: 586009

Strand: Direct

Name: orf23

Synonym: CD0496

Alternate gene names: NA

Gene position: 585695-586009 (Clockwise)

Preceding gene: 126698071

Following gene: 126698073

Centisome position: 13.65

GC content: 39.37

Gene sequence:

>315_bases
ATGGAACTTAAATTTGTCATTCCCAACATGGAAAAAACATTCGGAAACTTAGAATTTGCTGGCGAGGATAAAATCGTACA
GCGAAGAATCAACGGACAGCTTACTATCTTATCAAGAAGCTATAACCTCTATTCAGATGTTCAAAGAGCAGATGATATTG
TGGTGGTACTTCCTGCTGAAGCTGGCGAAAAACATTTCAGTTTTGAAGAAAAAGTAAAGCTCGTCAATCCACGTATTACT
GCCGAGGGCTACAAAATCGGTACTCGTGGCTTTACGAACTACATCTTAGAAGCTGACGACATGATTAAGGAATAG

Upstream 100 bases:

>100_bases
TGATACCACGAAAGCAAAAAATCAAGGTCGTTCCCCACCCAATAGACCATCAAACAAATTAGATTCATGAAACCATTAAA
CAGAAAGGATAGGTAAAAAT

Downstream 100 bases:

>100_bases
AAAGAAAGAGAGGAAAACATTATGAGATTAGCCAATGGCATTGTTTTAGAAAAAGACGCTACGTTTGGGGAATTAAAGTT
CTCTGCACTCCGACGTGAAG

Product: conjugative transposon protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MELKFVIPNMEKTFGNLEFAGEDKIVQRRINGQLTILSRSYNLYSDVQRADDIVVVLPAEAGEKHFSFEEKVKLVNPRIT
AEGYKIGTRGFTNYILEADDMIKE

Sequences:

>Translated_104_residues
MELKFVIPNMEKTFGNLEFAGEDKIVQRRINGQLTILSRSYNLYSDVQRADDIVVVLPAEAGEKHFSFEEKVKLVNPRIT
AEGYKIGTRGFTNYILEADDMIKE
>Mature_104_residues
MELKFVIPNMEKTFGNLEFAGEDKIVQRRINGQLTILSRSYNLYSDVQRADDIVVVLPAEAGEKHFSFEEKVKLVNPRIT
AEGYKIGTRGFTNYILEADDMIKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11915; Mature: 11915

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKFVIPNMEKTFGNLEFAGEDKIVQRRINGQLTILSRSYNLYSDVQRADDIVVVLPAE
CCEEEECCCCHHHCCCEEECCCCHHHHHHCCCEEEEEECCCCHHHHHHCCCCEEEEEECC
AGEKHFSFEEKVKLVNPRITAEGYKIGTRGFTNYILEADDMIKE
CCCCCCCHHHHEEECCCEEECCCEEECCCCCHHEEECCHHHHCC
>Mature Secondary Structure
MELKFVIPNMEKTFGNLEFAGEDKIVQRRINGQLTILSRSYNLYSDVQRADDIVVVLPAE
CCEEEECCCCHHHCCCEEECCCCHHHHHHCCCEEEEEECCCCHHHHHHCCCCEEEEEECC
AGEKHFSFEEKVKLVNPRITAEGYKIGTRGFTNYILEADDMIKE
CCCCCCCHHHHEEECCCEEECCCEEECCCCCHHEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA