Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is orf22

Identifier: 126698073

GI number: 126698073

Start: 586031

End: 586417

Strand: Direct

Name: orf22

Synonym: CD0497

Alternate gene names: NA

Gene position: 586031-586417 (Clockwise)

Preceding gene: 126698072

Following gene: 126698074

Centisome position: 13.66

GC content: 41.34

Gene sequence:

>387_bases
ATGAGATTAGCCAATGGCATTGTTTTAGAAAAAGACGCTACGTTTGGGGAATTAAAGTTCTCTGCACTCCGACGTGAAGT
AAGAATCCAAAATGAAGACGGGTCGGTATCAGATGAAATCAAAGAGCGTACCTATGACCTTAAATCCAAAGGACAAGGAC
GTATGATTCAAGTGAGTATTCCTGCCAGTGTTCCACTGAAAGAGTTTGACTATAACGCACGAGTGGAGCTTATCAATCCT
GTTGCTGATACGGTGGCTACTGCTACTTTTCAAGGGGCAGATGTGGACTGGTATATCAAGGCTGACGATATTGTGCTAAC
AAAGGATTCTAATTCCTTTAGAACACAACCTCAACCAAAGAAAGAACCTGTTATAGATAAACAGTAG

Upstream 100 bases:

>100_bases
TACTGCCGAGGGCTACAAAATCGGTACTCGTGGCTTTACGAACTACATCTTAGAAGCTGACGACATGATTAAGGAATAGA
AAGAAAGAGAGGAAAACATT

Downstream 100 bases:

>100_bases
CACTTCCGTTAGAGAGAAAGGAGGATTTTACCCATGAAACAGCGTGGTAAAAGGATTCGCCCATCGGATAAAGATTTAGT
CTTTCATTTTACGATTGCTT

Product: conjugative transposon protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MRLANGIVLEKDATFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINP
VADTVATATFQGADVDWYIKADDIVLTKDSNSFRTQPQPKKEPVIDKQ

Sequences:

>Translated_128_residues
MRLANGIVLEKDATFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINP
VADTVATATFQGADVDWYIKADDIVLTKDSNSFRTQPQPKKEPVIDKQ
>Mature_128_residues
MRLANGIVLEKDATFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINP
VADTVATATFQGADVDWYIKADDIVLTKDSNSFRTQPQPKKEPVIDKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14416; Mature: 14416

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLANGIVLEKDATFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSI
CCCCCCEEEECCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEC
PASVPLKEFDYNARVELINPVADTVATATFQGADVDWYIKADDIVLTKDSNSFRTQPQPK
CCCCCHHHCCCCCEEEEECCHHHHHHHEEECCCCEEEEEECCCEEEEECCCCCCCCCCCC
KEPVIDKQ
CCCCCCCC
>Mature Secondary Structure
MRLANGIVLEKDATFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSI
CCCCCCEEEECCCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEC
PASVPLKEFDYNARVELINPVADTVATATFQGADVDWYIKADDIVLTKDSNSFRTQPQPK
CCCCCHHHCCCCCEEEEECCHHHHHHHEEECCCCEEEEEECCCEEEEECCCCCCCCCCCC
KEPVIDKQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA