| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is manZ [H]
Identifier: 126698071
GI number: 126698071
Start: 583393
End: 584232
Strand: Direct
Name: manZ [H]
Synonym: CD0494
Alternate gene names: 126698071
Gene position: 583393-584232 (Clockwise)
Preceding gene: 126698070
Following gene: 126698072
Centisome position: 13.6
GC content: 32.26
Gene sequence:
>840_bases ATGTCAGATATAAAAAATGAAGTATCTAAGAAAACGTTAAGCAAGAAAGATGTAATAAAATCATGGTTAAGATGGTTTTT CTTTGCACAATCTAATTACAATTATGAAAGATTGCAATCAACAGCTTTTTCACATTCAATGTTGCCAGTACTTAAAAAAT TATATCCAGATAAGGAAGAGTTAAAACAAGAAGTGGAGACTCATCTAGCATTTTTTAACACAGAACCTATATGTGGATGT GTTATACATGGAATAACAATAGCTATGGAAGAAGAAAAAGCTAATGGAGCAGATGAAATAAGTGGAGATGGTATGAATGC TATCAAAACAGGCTTGATGGGTCCACTAGCGGGAATTGGCGATACTTTAACTCAAGGAGTTATAACTCCTATAGTGTTGG CTGTTTGTATTGGTTTAACTGAGGGAGGAGCATCAATTGCAGGACCTATATTATTTGTAATAGCTCAATATATAATAATG ACTTCAATTTCTTTTGGAATGTGGACAAATGGATATAAGTATGGGAAAAAAGCTGTTGAAAGTATACTTCAAGGTGGAAT AGTAAATAAGGTTATAGAAGGGGCTTCTATACTAGGTACCTTAGTCATGGGGGGACTTGTAGGTAGGTTTATTAATTTAT CTACACCAATAAGTTATACTAGTGGTGATTTTAAATTTAGTCTTCAAACGGATTTACTTGATAAGATATTTCCTGGGTTA ATTCCTTTGGTACTTACTTTATTAGTACTCTTTGCTTTAAAAAAAGGTCTTTCTCCAATAAAAATAATGTGTATACTGAT AGTAGTGGGAGCTATTACAGGTATTTTAGGACTATTTTAA
Upstream 100 bases:
>100_bases TAATATCTGTTATTGGAGTAATACTTGCTCTTACAATTACTTCAATTAAGTACGGAAAAGATAGTGCTACATCTTAAATA CATGTGAGGGGGAAAATATT
Downstream 100 bases:
>100_bases ATAAATATATATTGGTGTAAGTTAGGATTCTATATCTATTGATTATATTTGTAGGATGTTGGAAAATTTATATTAAAAAG TTTGGCAATTAGGGTAATTT
Product: PTS system transporter subunit IID
Products: protein histidine; sugar phosphate; D-glucosamine-6-phosphate [Cytoplasm]; pyruvate; glucose-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm] [C]
Alternate protein names: EII-M-Man; EIID-Man; PTS system mannose-specific EIID component [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSDIKNEVSKKTLSKKDVIKSWLRWFFFAQSNYNYERLQSTAFSHSMLPVLKKLYPDKEELKQEVETHLAFFNTEPICGC VIHGITIAMEEEKANGADEISGDGMNAIKTGLMGPLAGIGDTLTQGVITPIVLAVCIGLTEGGASIAGPILFVIAQYIIM TSISFGMWTNGYKYGKKAVESILQGGIVNKVIEGASILGTLVMGGLVGRFINLSTPISYTSGDFKFSLQTDLLDKIFPGL IPLVLTLLVLFALKKGLSPIKIMCILIVVGAITGILGLF
Sequences:
>Translated_279_residues MSDIKNEVSKKTLSKKDVIKSWLRWFFFAQSNYNYERLQSTAFSHSMLPVLKKLYPDKEELKQEVETHLAFFNTEPICGC VIHGITIAMEEEKANGADEISGDGMNAIKTGLMGPLAGIGDTLTQGVITPIVLAVCIGLTEGGASIAGPILFVIAQYIIM TSISFGMWTNGYKYGKKAVESILQGGIVNKVIEGASILGTLVMGGLVGRFINLSTPISYTSGDFKFSLQTDLLDKIFPGL IPLVLTLLVLFALKKGLSPIKIMCILIVVGAITGILGLF >Mature_278_residues SDIKNEVSKKTLSKKDVIKSWLRWFFFAQSNYNYERLQSTAFSHSMLPVLKKLYPDKEELKQEVETHLAFFNTEPICGCV IHGITIAMEEEKANGADEISGDGMNAIKTGLMGPLAGIGDTLTQGVITPIVLAVCIGLTEGGASIAGPILFVIAQYIIMT SISFGMWTNGYKYGKKAVESILQGGIVNKVIEGASILGTLVMGGLVGRFINLSTPISYTSGDFKFSLQTDLLDKIFPGLI PLVLTLLVLFALKKGLSPIKIMCILIVVGAITGILGLF
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3716
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIID domain [H]
Homologues:
Organism=Escherichia coli, GI1788122, Length=287, Percent_Identity=37.2822299651568, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI1789529, Length=277, Percent_Identity=31.7689530685921, Blast_Score=140, Evalue=7e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004704 - InterPro: IPR018405 [H]
Pfam domain/function: PF03613 EIID-AGA [H]
EC number: NA
Molecular weight: Translated: 30146; Mature: 30015
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: PS51108 PTS_EIID
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIKNEVSKKTLSKKDVIKSWLRWFFFAQSNYNYERLQSTAFSHSMLPVLKKLYPDKEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH LKQEVETHLAFFNTEPICGCVIHGITIAMEEEKANGADEISGDGMNAIKTGLMGPLAGIG HHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DTLTQGVITPIVLAVCIGLTEGGASIAGPILFVIAQYIIMTSISFGMWTNGYKYGKKAVE HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SILQGGIVNKVIEGASILGTLVMGGLVGRFINLSTPISYTSGDFKFSLQTDLLDKIFPGL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHH IPLVLTLLVLFALKKGLSPIKIMCILIVVGAITGILGLF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDIKNEVSKKTLSKKDVIKSWLRWFFFAQSNYNYERLQSTAFSHSMLPVLKKLYPDKEE CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH LKQEVETHLAFFNTEPICGCVIHGITIAMEEEKANGADEISGDGMNAIKTGLMGPLAGIG HHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DTLTQGVITPIVLAVCIGLTEGGASIAGPILFVIAQYIIMTSISFGMWTNGYKYGKKAVE HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SILQGGIVNKVIEGASILGTLVMGGLVGRFINLSTPISYTSGDFKFSLQTDLLDKIFPGL HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHH IPLVLTLLVLFALKKGLSPIKIMCILIVVGAITGILGLF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N p -phosphohistidine; sugar; phosphoenolpyruvate; glucosamine [Periplasm]; phosphoenolpyruvate; beta-D-glucose [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; fructose [Periplasm] [C]
Specific reaction: protein N p -phosphohistidine + sugar = protein histidine + sugar phosphate phosphoenolpyruvate + glucosamine [Periplasm] = D-glucosamine-6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + beta-D-glucose [Periplasm] = glucose-6-phosphate [Cytoplasm]
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]