Definition Clostridium difficile 630 chromosome, complete genome.
Accession NC_009089
Length 4,290,252

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The map label for this gene is 126697915

Identifier: 126697915

GI number: 126697915

Start: 419403

End: 420134

Strand: Direct

Name: 126697915

Synonym: CD0343

Alternate gene names: NA

Gene position: 419403-420134 (Clockwise)

Preceding gene: 126697911

Following gene: 126697916

Centisome position: 9.78

GC content: 23.63

Gene sequence:

>732_bases
ATGACTAGTATAAAAAATAAAGATATTTTAAATTGTATAGATTATTCCATTAAAAATAAGCTCTTTGACAAACTAAATGA
TGTATATAAGTCCTTGCCAGTAGGAAATTGTTCTGGATGTGGAAATTGTTGTATGGAGTCAGTAGGTATAAATTTAATTG
AGTTTTTGAATATATTTTGTTATCTTGAAGATAGAGTTGATTTAAAAAAAAGCTGTATAAGTAAAATATTAGATTATTAT
TTTGAGGAGTATACAAGAAAGAACCCATGTCCATTTAAAGATACTAATAATAGATGTTTAATATATGAAGTTAGACCATT
AAATTGTAGGATGTTTGGACATTGGAAAAAAGAGGATTATAATAAAAATTTAGATAATGTTATTGAGAAAAATAATAACT
ATAGAGAGTTAATGAAAAAGCAATATGGATTTGAAATAAATGATGAAGTAGTAAATTACAGGATAGATTATTGTGATAGA
TTTATTCCAAATAAAGATTATTTAAGTAAATCTAAGAGATTAAGCTTTTTTGATGAGCTTATGATATTAGACTCAAGTAT
TTATTCAAGTGGAAATATAGATATAGACTTTAGGGATAGAGGTATAGTTGAATATTTTATAGAGTCATTACTTTATAGAA
ATTTAGCATATAATGTGAAAATAAGGATATCTAAAGAATACAAAATAAGAAAAAGAACTATAGATAGAATAAAAAGGATT
GTTCTTGTATAG

Upstream 100 bases:

>100_bases
ATATCTATTCATAAAATACCTCCATATGCGATTAAATTTAAAAAATATGTTATAATAATTGTTTGTATTAACTTAATAAT
TATAACAAGGAGTAATAATA

Downstream 100 bases:

>100_bases
TTTTATATTAGTAAGTAATAAATTGTATCATAAATATTGTCAAAATGAGGTGAAGAAGGTGAATCTTACAAAAGTAAAAG
GAAATACCTTTTTTATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTSIKNKDILNCIDYSIKNKLFDKLNDVYKSLPVGNCSGCGNCCMESVGINLIEFLNIFCYLEDRVDLKKSCISKILDYY
FEEYTRKNPCPFKDTNNRCLIYEVRPLNCRMFGHWKKEDYNKNLDNVIEKNNNYRELMKKQYGFEINDEVVNYRIDYCDR
FIPNKDYLSKSKRLSFFDELMILDSSIYSSGNIDIDFRDRGIVEYFIESLLYRNLAYNVKIRISKEYKIRKRTIDRIKRI
VLV

Sequences:

>Translated_243_residues
MTSIKNKDILNCIDYSIKNKLFDKLNDVYKSLPVGNCSGCGNCCMESVGINLIEFLNIFCYLEDRVDLKKSCISKILDYY
FEEYTRKNPCPFKDTNNRCLIYEVRPLNCRMFGHWKKEDYNKNLDNVIEKNNNYRELMKKQYGFEINDEVVNYRIDYCDR
FIPNKDYLSKSKRLSFFDELMILDSSIYSSGNIDIDFRDRGIVEYFIESLLYRNLAYNVKIRISKEYKIRKRTIDRIKRI
VLV
>Mature_242_residues
TSIKNKDILNCIDYSIKNKLFDKLNDVYKSLPVGNCSGCGNCCMESVGINLIEFLNIFCYLEDRVDLKKSCISKILDYYF
EEYTRKNPCPFKDTNNRCLIYEVRPLNCRMFGHWKKEDYNKNLDNVIEKNNNYRELMKKQYGFEINDEVVNYRIDYCDRF
IPNKDYLSKSKRLSFFDELMILDSSIYSSGNIDIDFRDRGIVEYFIESLLYRNLAYNVKIRISKEYKIRKRTIDRIKRIV
LV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29119; Mature: 28988

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIKNKDILNCIDYSIKNKLFDKLNDVYKSLPVGNCSGCGNCCMESVGINLIEFLNIFC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
YLEDRVDLKKSCISKILDYYFEEYTRKNPCPFKDTNNRCLIYEVRPLNCRMFGHWKKEDY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECCCCHHHH
NKNLDNVIEKNNNYRELMKKQYGFEINDEVVNYRIDYCDRFIPNKDYLSKSKRLSFFDEL
CCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHEEHHHHHHHCCCHHHHHHHHHHHHHHHH
MILDSSIYSSGNIDIDFRDRGIVEYFIESLLYRNLAYNVKIRISKEYKIRKRTIDRIKRI
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHH
VLV
HCC
>Mature Secondary Structure 
TSIKNKDILNCIDYSIKNKLFDKLNDVYKSLPVGNCSGCGNCCMESVGINLIEFLNIFC
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
YLEDRVDLKKSCISKILDYYFEEYTRKNPCPFKDTNNRCLIYEVRPLNCRMFGHWKKEDY
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECCCCHHHH
NKNLDNVIEKNNNYRELMKKQYGFEINDEVVNYRIDYCDRFIPNKDYLSKSKRLSFFDEL
CCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHEEHHHHHHHCCCHHHHHHHHHHHHHHHH
MILDSSIYSSGNIDIDFRDRGIVEYFIESLLYRNLAYNVKIRISKEYKIRKRTIDRIKRI
HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHHHHH
VLV
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA