| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is 126697916
Identifier: 126697916
GI number: 126697916
Start: 420193
End: 421104
Strand: Direct
Name: 126697916
Synonym: CD0344
Alternate gene names: NA
Gene position: 420193-421104 (Clockwise)
Preceding gene: 126697915
Following gene: 126697917
Centisome position: 9.79
GC content: 25.33
Gene sequence:
>912_bases GTGAATCTTACAAAAGTAAAAGGAAATACCTTTTTTATAAAAGGTGGCACGAATACAGGAATATATGTATTTGAAGATAA CACAGCACTTATGATAGACCCAGGGTTATGTGGTTCAAGACCTAGGAGAGTAAATAAAGTATTAGATGAAAATAATATAC AGGTTAGATATATTATAAATACTCATGGTCATGATGACCACTATGGAGCTTGTAATCAATTTAAAGAATATTATAAAGAT GTGTGTATAATGTCATCTGAATACGATAAATTATATATAGAAAATCCAGAATTGTTTTCAAAGTATATTGTTGGGGGAAA GAGCAATGTATTTATGGATAATATCTTAAAAAATAAAATGTTGGATGATATAAAAATAGATAAATCTATAGAAGCTGGAA AATTTGAATTAAACAATGAAATGTTTGATATAATTGAATTTCAGGGTCATACACCTGGTAGTATAGCTGTTTTGACGAAG GATAATGTGATTTTTGTTGGCGATTTATTGATAGGAGATGAAATTTTATCAAAATACGATTTCTTGTTTCTATATGATAT ACAAGAACAAATAAATTCATTAGAAAAATTAAAAAATATAGATTTTGAGTACTTAGTTTTAGGGCATGGCAAGCAAGTTA TATCGAAAGAAGATTCTTATAAATTAATAGAAAAACATTTGAATGCTTTAAAAAAATATTTATATCAAATAAGAGAGTTG CTTGTAGAACCGAAATCTTTAGAAATTTTATTAAAAAACATTATAAATAACAATAATTTAAGCAATAATTATAAAGAGTA TCATTTTTTTAAATCTTCGTTAGTATCTGTCATAAGTTACTTAGTTGATTTAGAAGAAATAGGGTATATATTGGAAAATG GAGAATTGCTTTACTATACAAAAACAAAATAA
Upstream 100 bases:
>100_bases AAAAGAACTATAGATAGAATAAAAAGGATTGTTCTTGTATAGTTTTATATTAGTAAGTAATAAATTGTATCATAAATATT GTCAAAATGAGGTGAAGAAG
Downstream 100 bases:
>100_bases ATTATGATAAAATAAAGAAGGTCATAAAAAACAAATAAAGGGTGAGCAATATGGAATACGAAAAATGGAATGAGATACTA GCACCTTATGAACATGCAGT
Product: metallo-beta-lactamase superfamily protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Domain Protein; Hydrolase; Zinc Metallohydrolase; Beta-Lactamase-Like; Zn-Dependent Hydrolase Glyoxylase II Family; Metallo-Beta-Lactamase Superfamily Protein; Zinc-Dependent Hydrolase; Metallo-Beta-Lactamase; Zn-Dependent Hydrolase Including Glyoxylase; Zinc Metallohydrolase Glyoxalase II Family
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MNLTKVKGNTFFIKGGTNTGIYVFEDNTALMIDPGLCGSRPRRVNKVLDENNIQVRYIINTHGHDDHYGACNQFKEYYKD VCIMSSEYDKLYIENPELFSKYIVGGKSNVFMDNILKNKMLDDIKIDKSIEAGKFELNNEMFDIIEFQGHTPGSIAVLTK DNVIFVGDLLIGDEILSKYDFLFLYDIQEQINSLEKLKNIDFEYLVLGHGKQVISKEDSYKLIEKHLNALKKYLYQIREL LVEPKSLEILLKNIINNNNLSNNYKEYHFFKSSLVSVISYLVDLEEIGYILENGELLYYTKTK
Sequences:
>Translated_303_residues MNLTKVKGNTFFIKGGTNTGIYVFEDNTALMIDPGLCGSRPRRVNKVLDENNIQVRYIINTHGHDDHYGACNQFKEYYKD VCIMSSEYDKLYIENPELFSKYIVGGKSNVFMDNILKNKMLDDIKIDKSIEAGKFELNNEMFDIIEFQGHTPGSIAVLTK DNVIFVGDLLIGDEILSKYDFLFLYDIQEQINSLEKLKNIDFEYLVLGHGKQVISKEDSYKLIEKHLNALKKYLYQIREL LVEPKSLEILLKNIINNNNLSNNYKEYHFFKSSLVSVISYLVDLEEIGYILENGELLYYTKTK >Mature_303_residues MNLTKVKGNTFFIKGGTNTGIYVFEDNTALMIDPGLCGSRPRRVNKVLDENNIQVRYIINTHGHDDHYGACNQFKEYYKD VCIMSSEYDKLYIENPELFSKYIVGGKSNVFMDNILKNKMLDDIKIDKSIEAGKFELNNEMFDIIEFQGHTPGSIAVLTK DNVIFVGDLLIGDEILSKYDFLFLYDIQEQINSLEKLKNIDFEYLVLGHGKQVISKEDSYKLIEKHLNALKKYLYQIREL LVEPKSLEILLKNIINNNNLSNNYKEYHFFKSSLVSVISYLVDLEEIGYILENGELLYYTKTK
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35121; Mature: 35121
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLTKVKGNTFFIKGGTNTGIYVFEDNTALMIDPGLCGSRPRRVNKVLDENNIQVRYIIN CCCEEECCCEEEEECCCCCEEEEEECCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEEE THGHDDHYGACNQFKEYYKDVCIMSSEYDKLYIENPELFSKYIVGGKSNVFMDNILKNKM CCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHH LDDIKIDKSIEAGKFELNNEMFDIIEFQGHTPGSIAVLTKDNVIFVGDLLIGDEILSKYD HCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEEEEECCEEEEEHHHHHHHHHHHCC FLFLYDIQEQINSLEKLKNIDFEYLVLGHGKQVISKEDSYKLIEKHLNALKKYLYQIREL EEEEEEHHHHHHHHHHHHCCCEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LVEPKSLEILLKNIINNNNLSNNYKEYHFFKSSLVSVISYLVDLEEIGYILENGELLYYT HCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEE KTK ECC >Mature Secondary Structure MNLTKVKGNTFFIKGGTNTGIYVFEDNTALMIDPGLCGSRPRRVNKVLDENNIQVRYIIN CCCEEECCCEEEEECCCCCEEEEEECCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEEEE THGHDDHYGACNQFKEYYKDVCIMSSEYDKLYIENPELFSKYIVGGKSNVFMDNILKNKM CCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHH LDDIKIDKSIEAGKFELNNEMFDIIEFQGHTPGSIAVLTKDNVIFVGDLLIGDEILSKYD HCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCEEEEEEECCEEEEEHHHHHHHHHHHCC FLFLYDIQEQINSLEKLKNIDFEYLVLGHGKQVISKEDSYKLIEKHLNALKKYLYQIREL EEEEEEHHHHHHHHHHHHCCCEEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LVEPKSLEILLKNIINNNNLSNNYKEYHFFKSSLVSVISYLVDLEEIGYILENGELLYYT HCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEE KTK ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA