| Definition | Clostridium difficile 630 chromosome, complete genome. |
|---|---|
| Accession | NC_009089 |
| Length | 4,290,252 |
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The map label for this gene is ykvI [H]
Identifier: 126697703
GI number: 126697703
Start: 175896
End: 176993
Strand: Direct
Name: ykvI [H]
Synonym: CD0131
Alternate gene names: 126697703
Gene position: 175896-176993 (Clockwise)
Preceding gene: 126697702
Following gene: 126697704
Centisome position: 4.1
GC content: 31.97
Gene sequence:
>1098_bases ATGTCAGGCAAAGTAAATATTAAAACGGTTATAAGTTTTGCTGGAGCTTATGTTGCTACTGTAATAGGTTCTGGATTTGC AACTGGTCAAGAAATACTGCAATTTTTTACGTTTTATGGATATGCGGGTATTATAGGTGGAATAATCTCTATGGTACTAT TTTCATGGTTTGGAGCAGAAGTTATAGATAAGGGAAGAGAATTGAAACTTAAGGAGCCAATAAAAATTTATCAAGTATAT TGTGGAAAATATCTTGGAACATTTTTTGAATGGTTTGGTCCATTGTTTTTATTTGGAACATTAGTAATAATGATTGCAGG AGCAGGAGCTACATTATCAGAGTACTATGGATTAAATCCATATGTAGGTAGGATTGGTATGGCAATCGTTTCCCTAATAA CTGTTTCATTAGGTTTGACAAGGCTTTCTAAAATACTAGGTAATATAGGACCTATAATAATAATATTTACACTTTTAGTA GGAGCAATTAGTTTATTTAGCAATATTGATGCTTTATCAAATGCTGGAAATATGGTTGATAGTTTAAATATTAAAACTGC TACATCAAATGGATATTTCTCGGGAGTACTTTATACTTGTTACAATGTAATAATAGTAATAACATTCTTGACAGGAATGG GAGCTTCTGCAGTAAATAAGAAAGATGCTGTATGGGGTGGTATAGTAGGTGGAGTAGCACTTATGGCAGCAGCTATAATG ATGAATTTGGCATTACTTTCAGACATAGGAAATATATACACAAAAGAGATACCAGCACTTTACTTAGCTGATAAGATATC TCCAATAATAGGTATTTTATTCTCAGTAGTACTTTTACTAGGAATATACACTACAGCTGTACCATTGTTATGGTCAGTAA CAAACCGATTTGTAGAAGATGACCACCCTAAGTTTAAAATTATAACAATAGTGGTAAGTATATTAGCTTGTATAGGAGGT TTACTGCCATTTGATAAGTTAGTAGGTACACTATATCCATATACAGGTTACATGGGAATTTTAATTTTACTATGTATGCT TTATAGAAGAATTACTAAAACTGAGGGGTACAAGGAGAATAAATCTGAAATAAGTTAG
Upstream 100 bases:
>100_bases TAAATAATTAAAAATATATTGAAATATCACAATAATGAGTCTAATATAATCTTAATAAACTTACACTTTAAAAATAATTT TAATTGGGGGGGAGTAGTGT
Downstream 100 bases:
>100_bases TACTGTAATATACTTATGAAATTTAATTTATACTCTAAATATAGAGTAATTAAAATAAAATAGCTATTTAAATATGGTAC CTGTATTTCATGGTACCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MSGKVNIKTVISFAGAYVATVIGSGFATGQEILQFFTFYGYAGIIGGIISMVLFSWFGAEVIDKGRELKLKEPIKIYQVY CGKYLGTFFEWFGPLFLFGTLVIMIAGAGATLSEYYGLNPYVGRIGMAIVSLITVSLGLTRLSKILGNIGPIIIIFTLLV GAISLFSNIDALSNAGNMVDSLNIKTATSNGYFSGVLYTCYNVIIVITFLTGMGASAVNKKDAVWGGIVGGVALMAAAIM MNLALLSDIGNIYTKEIPALYLADKISPIIGILFSVVLLLGIYTTAVPLLWSVTNRFVEDDHPKFKIITIVVSILACIGG LLPFDKLVGTLYPYTGYMGILILLCMLYRRITKTEGYKENKSEIS
Sequences:
>Translated_365_residues MSGKVNIKTVISFAGAYVATVIGSGFATGQEILQFFTFYGYAGIIGGIISMVLFSWFGAEVIDKGRELKLKEPIKIYQVY CGKYLGTFFEWFGPLFLFGTLVIMIAGAGATLSEYYGLNPYVGRIGMAIVSLITVSLGLTRLSKILGNIGPIIIIFTLLV GAISLFSNIDALSNAGNMVDSLNIKTATSNGYFSGVLYTCYNVIIVITFLTGMGASAVNKKDAVWGGIVGGVALMAAAIM MNLALLSDIGNIYTKEIPALYLADKISPIIGILFSVVLLLGIYTTAVPLLWSVTNRFVEDDHPKFKIITIVVSILACIGG LLPFDKLVGTLYPYTGYMGILILLCMLYRRITKTEGYKENKSEIS >Mature_364_residues SGKVNIKTVISFAGAYVATVIGSGFATGQEILQFFTFYGYAGIIGGIISMVLFSWFGAEVIDKGRELKLKEPIKIYQVYC GKYLGTFFEWFGPLFLFGTLVIMIAGAGATLSEYYGLNPYVGRIGMAIVSLITVSLGLTRLSKILGNIGPIIIIFTLLVG AISLFSNIDALSNAGNMVDSLNIKTATSNGYFSGVLYTCYNVIIVITFLTGMGASAVNKKDAVWGGIVGGVALMAAAIMM NLALLSDIGNIYTKEIPALYLADKISPIIGILFSVVLLLGIYTTAVPLLWSVTNRFVEDDHPKFKIITIVVSILACIGGL LPFDKLVGTLYPYTGYMGILILLCMLYRRITKTEGYKENKSEIS
Specific function: Unknown
COG id: COG3949
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39378; Mature: 39247
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKVNIKTVISFAGAYVATVIGSGFATGQEILQFFTFYGYAGIIGGIISMVLFSWFGAE CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH VIDKGRELKLKEPIKIYQVYCGKYLGTFFEWFGPLFLFGTLVIMIAGAGATLSEYYGLNP HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCH YVGRIGMAIVSLITVSLGLTRLSKILGNIGPIIIIFTLLVGAISLFSNIDALSNAGNMVD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SLNIKTATSNGYFSGVLYTCYNVIIVITFLTGMGASAVNKKDAVWGGIVGGVALMAAAIM HCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MNLALLSDIGNIYTKEIPALYLADKISPIIGILFSVVLLLGIYTTAVPLLWSVTNRFVED HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DHPKFKIITIVVSILACIGGLLPFDKLVGTLYPYTGYMGILILLCMLYRRITKTEGYKEN CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC KSEIS CCCCC >Mature Secondary Structure SGKVNIKTVISFAGAYVATVIGSGFATGQEILQFFTFYGYAGIIGGIISMVLFSWFGAE CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH VIDKGRELKLKEPIKIYQVYCGKYLGTFFEWFGPLFLFGTLVIMIAGAGATLSEYYGLNP HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCH YVGRIGMAIVSLITVSLGLTRLSKILGNIGPIIIIFTLLVGAISLFSNIDALSNAGNMVD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH SLNIKTATSNGYFSGVLYTCYNVIIVITFLTGMGASAVNKKDAVWGGIVGGVALMAAAIM HCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MNLALLSDIGNIYTKEIPALYLADKISPIIGILFSVVLLLGIYTTAVPLLWSVTNRFVED HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DHPKFKIITIVVSILACIGGLLPFDKLVGTLYPYTGYMGILILLCMLYRRITKTEGYKEN CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC KSEIS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]