Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is paaB [H]

Identifier: 124266181

GI number: 124266181

Start: 1050617

End: 1050907

Strand: Direct

Name: paaB [H]

Synonym: Mpe_A0988

Alternate gene names: 124266181

Gene position: 1050617-1050907 (Clockwise)

Preceding gene: 124266180

Following gene: 124266182

Centisome position: 25.98

GC content: 65.98

Gene sequence:

>291_bases
ATGAGCACCGACACCGAATGGCCGCTGTGGGAGGTCTTCGTGCGCAGCAAGGCCGGCCTGGACCACAAGCACTGCGGCAG
CCTGCACGCCACCGACGCGAAGATGGCGATCCAGCTCGCGCGCGACGTCTACACGCGCCGTCAGGAAGGGACGAGCCTCT
GGGTGGTGCGTTCGGACCAGATCACCGCCAGCGACCCGGCCGAGAAGGGCGCCTTTTTCGACCCGATGGAGGACAAGGTC
TACCGCCACCCGACCTTCTACGCGCTGCCGAAGTCGGTCGATCACATGTGA

Upstream 100 bases:

>100_bases
AGCGCCTCGCCGCCCGCGTGCAGGCCTGGGCGGAGGGCGCCTGGGTGCGCGAGGCCGCGCTGGCGCATGCACGCAAGCAG
GCACCGAAGGAGGAGGTCGC

Downstream 100 bases:

>100_bases
ACCGAGGCCGGCATGACGCAATCCATCGAACTCCGGCGCGATCCCGCGGTGCAGTACCTGCTGCGCATCGCCGACACGAC
GCTGATCCTGGCGCAGCGGC

Product: phenylacetate-CoA oxygenase subunit PaaB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSTDTEWPLWEVFVRSKAGLDHKHCGSLHATDAKMAIQLARDVYTRRQEGTSLWVVRSDQITASDPAEKGAFFDPMEDKV
YRHPTFYALPKSVDHM

Sequences:

>Translated_96_residues
MSTDTEWPLWEVFVRSKAGLDHKHCGSLHATDAKMAIQLARDVYTRRQEGTSLWVVRSDQITASDPAEKGAFFDPMEDKV
YRHPTFYALPKSVDHM
>Mature_95_residues
STDTEWPLWEVFVRSKAGLDHKHCGSLHATDAKMAIQLARDVYTRRQEGTSLWVVRSDQITASDPAEKGAFFDPMEDKVY
RHPTFYALPKSVDHM

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG3460

COG function: function code Q; Uncharacterized enzyme of phenylacetate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787655, Length=94, Percent_Identity=60.6382978723404, Blast_Score=137, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009359 [H]

Pfam domain/function: PF06243 PaaB [H]

EC number: NA

Molecular weight: Translated: 11010; Mature: 10879

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDTEWPLWEVFVRSKAGLDHKHCGSLHATDAKMAIQLARDVYTRRQEGTSLWVVRSDQ
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
ITASDPAEKGAFFDPMEDKVYRHPTFYALPKSVDHM
CCCCCCCCCCCCCCCCCCHHCCCCCEEECCCCCCCC
>Mature Secondary Structure 
STDTEWPLWEVFVRSKAGLDHKHCGSLHATDAKMAIQLARDVYTRRQEGTSLWVVRSDQ
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
ITASDPAEKGAFFDPMEDKVYRHPTFYALPKSVDHM
CCCCCCCCCCCCCCCCCCHHCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]