| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is ureB
Identifier: 124265861
GI number: 124265861
Start: 705098
End: 705406
Strand: Reverse
Name: ureB
Synonym: Mpe_A0668
Alternate gene names: 124265861
Gene position: 705406-705098 (Counterclockwise)
Preceding gene: 124265862
Following gene: 124265860
Centisome position: 17.44
GC content: 69.26
Gene sequence:
>309_bases ATGACGCCTGGAGAGCTGTTGCCGTCCGACGGACCGGACCATGTGCTGAACCCCGATCGCCGCACGCTGACGCTGGTGAT CGAGAACGGTGGCGACCGGCCGATCCAGGTCGGCTCGCACTACCACTTCGCCGAGACCAACGGCGCGCTGCGCTTCGACC GCGCCGCGGCCCACGGCATGCGGCTCAACATCGCCTCGGGCACCGCAGTGCGCTTCGAGCCCGGCCAGCAGCGCACTGTC GAGCTGGTCGACTACGCCGGCGACCGCACGGTCTACGGCTTCCGCGGCCTCGTGCAAGGAAAGCTCTGA
Upstream 100 bases:
>100_bases GGCGTGGCCGAGATGATCCCGGACATCCAGGTCGAGGCGACCTTCCCGGACGGCACCAAATTGGTGACCGTGCACCAACC CATTGCATGAGGCCGCTCAC
Downstream 100 bases:
>100_bases CATGGCCACCATCGGACGCCGCGCCTACGCGGAGATGTACGGACCGACGGTGGGCGACCGCGTGCGGCTGGCCGACACCG AACTCGTTATCGAGGTCGAG
Product: urease subunit beta
Products: NA
Alternate protein names: Urea amidohydrolase subunit beta
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MTPGELLPSDGPDHVLNPDRRTLTLVIENGGDRPIQVGSHYHFAETNGALRFDRAAAHGMRLNIASGTAVRFEPGQQRTV ELVDYAGDRTVYGFRGLVQGKL
Sequences:
>Translated_102_residues MTPGELLPSDGPDHVLNPDRRTLTLVIENGGDRPIQVGSHYHFAETNGALRFDRAAAHGMRLNIASGTAVRFEPGQQRTV ELVDYAGDRTVYGFRGLVQGKL >Mature_101_residues TPGELLPSDGPDHVLNPDRRTLTLVIENGGDRPIQVGSHYHFAETNGALRFDRAAAHGMRLNIASGTAVRFEPGQQRTVE LVDYAGDRTVYGFRGLVQGKL
Specific function: Unknown
COG id: COG0832
COG function: function code E; Urea amidohydrolase (urease) beta subunit
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease beta subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): URE2_METPP (A2SDJ1)
Other databases:
- EMBL: CP000555 - RefSeq: YP_001019865.1 - ProteinModelPortal: A2SDJ1 - SMR: A2SDJ1 - STRING: A2SDJ1 - GeneID: 4784795 - GenomeReviews: CP000555_GR - KEGG: mpt:Mpe_A0668 - NMPDR: fig|279263.3.peg.3232 - eggNOG: COG0832 - HOGENOM: HBG365918 - OMA: RETAYGM - ProtClustDB: PRK13203 - BioCyc: MPET420662:MPE_A0668-MONOMER - GO: GO:0005737 - HAMAP: MF_01954 - InterPro: IPR002019 - Gene3D: G3DSA:2.10.150.10 - TIGRFAMs: TIGR00192
Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta
EC number: =3.5.1.5
Molecular weight: Translated: 11144; Mature: 11012
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPGELLPSDGPDHVLNPDRRTLTLVIENGGDRPIQVGSHYHFAETNGALRFDRAAAHGM CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCEEEEECCCCCEEECCCCCCCE RLNIASGTAVRFEPGQQRTVELVDYAGDRTVYGFRGLVQGKL EEEECCCCEEEECCCCCCEEEEEECCCCEEEEEECEEEECCC >Mature Secondary Structure TPGELLPSDGPDHVLNPDRRTLTLVIENGGDRPIQVGSHYHFAETNGALRFDRAAAHGM CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECCEEEEECCCCCEEECCCCCCCE RLNIASGTAVRFEPGQQRTVELVDYAGDRTVYGFRGLVQGKL EEEECCCCEEEECCCCCCEEEEEECCCCEEEEEECEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA