Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is yuiD [H]

Identifier: 124026220

GI number: 124026220

Start: 1228426

End: 1228941

Strand: Reverse

Name: yuiD [H]

Synonym: NATL1_15141

Alternate gene names: 124026220

Gene position: 1228941-1228426 (Counterclockwise)

Preceding gene: 124026221

Following gene: 124026219

Centisome position: 65.9

GC content: 38.18

Gene sequence:

>516_bases
ATGAATCTTAATCCAGCTTTCGAATTTCAATTCATTTATATTCTTGATAATGCTGTATTGGCTTGGGGGCTAGCAGCATG
TGGTCTTGCTCAATTTTCTAAATTATTATTCGAATTGATTTTTAAGCAACGGTGGAGACCGTCAGTACTTATTGAAACAG
GAGGTATGCCTTCCAGTCACTCGGCTTTGGTAACAGGAACCGCTGCAGGAATTGGACTTCAGCTTGGTTTTAATGATCCA
GTATTTGCTTTGGCTTCAACAATTGCTTTTATTGTGATGTACGACGCTTCGGGCATAAGGAGGTCGGCAGGCTTAACAGC
AGCAAGAGTCAATCAAATTTTAAAAGATAATTCCAACGAATTATCTTCAGAAACTACTTTGAAAGAATCATTAGGGCACA
CAAAAATTGAGGTATTGATAGGAAGTATTCTTGGACCAATTGTGGCTTTACCAGGTATTTTCTTCATTGGATCCCCTCTG
CATATTTTGCAAATGATTGGATTAGTTTCTTTGTGA

Upstream 100 bases:

>100_bases
CAGATCTTTTAGTAGCTAAAGCAAAAAGTGCTCTTGATCCTTGGCCAGAAAAATCAAAACCTCTTCTTGCATTGGCTGAT
TACATTACAAGTAGAGATAG

Downstream 100 bases:

>100_bases
AAGAGGTAAAAGCAAAAGAAGATCGTGTTGTTTTAACTAAGGATCAAGAAAAATCTCTTCAAATTTTCTGTGAATGGCTA
GAGGCCCCGTATTCCTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MNLNPAFEFQFIYILDNAVLAWGLAACGLAQFSKLLFELIFKQRWRPSVLIETGGMPSSHSALVTGTAAGIGLQLGFNDP
VFALASTIAFIVMYDASGIRRSAGLTAARVNQILKDNSNELSSETTLKESLGHTKIEVLIGSILGPIVALPGIFFIGSPL
HILQMIGLVSL

Sequences:

>Translated_171_residues
MNLNPAFEFQFIYILDNAVLAWGLAACGLAQFSKLLFELIFKQRWRPSVLIETGGMPSSHSALVTGTAAGIGLQLGFNDP
VFALASTIAFIVMYDASGIRRSAGLTAARVNQILKDNSNELSSETTLKESLGHTKIEVLIGSILGPIVALPGIFFIGSPL
HILQMIGLVSL
>Mature_171_residues
MNLNPAFEFQFIYILDNAVLAWGLAACGLAQFSKLLFELIFKQRWRPSVLIETGGMPSSHSALVTGTAAGIGLQLGFNDP
VFALASTIAFIVMYDASGIRRSAGLTAARVNQILKDNSNELSSETTLKESLGHTKIEVLIGSILGPIVALPGIFFIGSPL
HILQMIGLVSL

Specific function: Unknown

COG id: COG1963

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003832 [H]

Pfam domain/function: PF02681 DUF212 [H]

EC number: NA

Molecular weight: Translated: 18290; Mature: 18290

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNPAFEFQFIYILDNAVLAWGLAACGLAQFSKLLFELIFKQRWRPSVLIETGGMPSSH
CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
SALVTGTAAGIGLQLGFNDPVFALASTIAFIVMYDASGIRRSAGLTAARVNQILKDNSNE
CEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCCH
LSSETTLKESLGHTKIEVLIGSILGPIVALPGIFFIGSPLHILQMIGLVSL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNLNPAFEFQFIYILDNAVLAWGLAACGLAQFSKLLFELIFKQRWRPSVLIETGGMPSSH
CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
SALVTGTAAGIGLQLGFNDPVFALASTIAFIVMYDASGIRRSAGLTAARVNQILKDNSNE
CEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHCCCCH
LSSETTLKESLGHTKIEVLIGSILGPIVALPGIFFIGSPLHILQMIGLVSL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]