| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is nagA [H]
Identifier: 124024955
GI number: 124024955
Start: 223118
End: 224278
Strand: Direct
Name: nagA [H]
Synonym: NATL1_02421
Alternate gene names: 124024955
Gene position: 223118-224278 (Clockwise)
Preceding gene: 124024953
Following gene: 124024956
Centisome position: 11.97
GC content: 34.97
Gene sequence:
>1161_bases ATGAGAAAAATTACAAACATTAAAGTACCTCAACCAGAGAAAAGCGAAGATGAAAAGAATTTATTTTCACTAGTTTTAGA TGAACATGGAATTATTCTTTCTATTGATAAAACTTGCAAGAAGGAATCAAGTTATGACGAAGATTGGCATGGAGATTGGC TAAGTCCTAGAGCCATTGATCTTCAAATGAATGGAGGTTTAGGGATCTCATTTACAGATTTAAATTTTAATAAAATACCT AAATTATTAACATTGCTTGATCAACTTTGGCTAGATGGAGTTGAAGGAATTTGTCCAACTTTTGTTAGTTGTTCTCTAGA TCAATTTCAATTAGGAATGGAGGTCTTAAAGGAAACGAAAAAATATACTTCAACAAATCGATGTCGACTACTTGGCGCCC ATATGGAAGGACCTTTTTTATGTGAGACATATTCTGGAGCACATGACACAGGAAGTATTTGTAGACCTAGTATTTCTGCC TTAAATGAGAGAATAAAGGGATTTGAGGACGACATAGCACTAATGACATTGGCTCCAGAATTAAAAGGTTCTTTGGATGT AATTTCTCGTCTAAGAGAATTAAATATCGTTGTCTCACTGGGACATTCTTCAGCTGATTTTGATTCAGCCATAAAAGCTT TTAATAATGGTGTGAGCATGATTACGCATACTTTTAATGCAATGAAAGGTTTACATCATCGAGCTATTGGACCTATAGGA GCGGCTGCAAGAAGAGACGATATTTTCCTAGGATTGATAGGTGATGGTGTTCATGTTCATTCAGATATGATTAGGCTTTT AAAGATACTTGCACCAAAGCAAATTGTTTTAGTTAGCGATGCAATATCAGCTTATGGTTTAGGAGATGGATCGTTTAATT GGGATAAACGCTTGATAACAGTAGAAAATGGTTTATGCAGACTTCCAAATGAAACAATTGCAGGATCCACTTTGCCTTTA CTAGACGCATGCAAAAAAATAGCAAATTGGATTAATGATCCCTCTGCTGCTATTTGGATGGCAACACTTGCTCCACGTAT GGTATTAAGTCAGAACAAAATGACTGCAAAATCTTTTTTTATTGGAAAGAATATTAAGTCTTTACTTAGATGGAAAATGA ATTCTTGTAATCATCAGTTGTCTTGGCAGTTGGCTGCGTAA
Upstream 100 bases:
>100_bases TATTAGCTTCAGTTAAAGACAATTGTCAATTTTATAAATCTCATTTTTATAATGCCAATTATTTAAGAATTCTGCATTAA TTATTTTTAGTTTTTAAGAA
Downstream 100 bases:
>100_bases GATTGGTAAGAGGTAATTATCTGATTAAATGACAACGCAAATTGAGAAAAATGAAAAGGCGGAAGTCACTGAATATTTTA ATGGGACTGGGTTTGATAGA
Product: N-acetylglucosamine-6-phosphate deacetylase
Products: NA
Alternate protein names: GlcNAc 6-P deacetylase [H]
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MRKITNIKVPQPEKSEDEKNLFSLVLDEHGIILSIDKTCKKESSYDEDWHGDWLSPRAIDLQMNGGLGISFTDLNFNKIP KLLTLLDQLWLDGVEGICPTFVSCSLDQFQLGMEVLKETKKYTSTNRCRLLGAHMEGPFLCETYSGAHDTGSICRPSISA LNERIKGFEDDIALMTLAPELKGSLDVISRLRELNIVVSLGHSSADFDSAIKAFNNGVSMITHTFNAMKGLHHRAIGPIG AAARRDDIFLGLIGDGVHVHSDMIRLLKILAPKQIVLVSDAISAYGLGDGSFNWDKRLITVENGLCRLPNETIAGSTLPL LDACKKIANWINDPSAAIWMATLAPRMVLSQNKMTAKSFFIGKNIKSLLRWKMNSCNHQLSWQLAA
Sequences:
>Translated_386_residues MRKITNIKVPQPEKSEDEKNLFSLVLDEHGIILSIDKTCKKESSYDEDWHGDWLSPRAIDLQMNGGLGISFTDLNFNKIP KLLTLLDQLWLDGVEGICPTFVSCSLDQFQLGMEVLKETKKYTSTNRCRLLGAHMEGPFLCETYSGAHDTGSICRPSISA LNERIKGFEDDIALMTLAPELKGSLDVISRLRELNIVVSLGHSSADFDSAIKAFNNGVSMITHTFNAMKGLHHRAIGPIG AAARRDDIFLGLIGDGVHVHSDMIRLLKILAPKQIVLVSDAISAYGLGDGSFNWDKRLITVENGLCRLPNETIAGSTLPL LDACKKIANWINDPSAAIWMATLAPRMVLSQNKMTAKSFFIGKNIKSLLRWKMNSCNHQLSWQLAA >Mature_386_residues MRKITNIKVPQPEKSEDEKNLFSLVLDEHGIILSIDKTCKKESSYDEDWHGDWLSPRAIDLQMNGGLGISFTDLNFNKIP KLLTLLDQLWLDGVEGICPTFVSCSLDQFQLGMEVLKETKKYTSTNRCRLLGAHMEGPFLCETYSGAHDTGSICRPSISA LNERIKGFEDDIALMTLAPELKGSLDVISRLRELNIVVSLGHSSADFDSAIKAFNNGVSMITHTFNAMKGLHHRAIGPIG AAARRDDIFLGLIGDGVHVHSDMIRLLKILAPKQIVLVSDAISAYGLGDGSFNWDKRLITVENGLCRLPNETIAGSTLPL LDACKKIANWINDPSAAIWMATLAPRMVLSQNKMTAKSFFIGKNIKSLLRWKMNSCNHQLSWQLAA
Specific function: N-acetylglucosamine utilization. [C]
COG id: COG1820
COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nagA family [H]
Homologues:
Organism=Homo sapiens, GI21361513, Length=274, Percent_Identity=32.4817518248175, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI224922791, Length=273, Percent_Identity=32.6007326007326, Blast_Score=135, Evalue=4e-32, Organism=Escherichia coli, GI1786892, Length=337, Percent_Identity=30.8605341246291, Blast_Score=139, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17553768, Length=315, Percent_Identity=32.6984126984127, Blast_Score=144, Evalue=6e-35, Organism=Drosophila melanogaster, GI19920392, Length=351, Percent_Identity=32.4786324786325, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI281361140, Length=364, Percent_Identity=31.043956043956, Blast_Score=147, Evalue=8e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR003764 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.1.25 [H]
Molecular weight: Translated: 42709; Mature: 42709
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKITNIKVPQPEKSEDEKNLFSLVLDEHGIILSIDKTCKKESSYDEDWHGDWLSPRAID CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCCCCCCCCEEEE LQMNGGLGISFTDLNFNKIPKLLTLLDQLWLDGVEGICPTFVSCSLDQFQLGMEVLKETK EEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHH KYTSTNRCRLLGAHMEGPFLCETYSGAHDTGSICRPSISALNERIKGFEDDIALMTLAPE HHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECHH LKGSLDVISRLRELNIVVSLGHSSADFDSAIKAFNNGVSMITHTFNAMKGLHHRAIGPIG HCCHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC AAARRDDIFLGLIGDGVHVHSDMIRLLKILAPKQIVLVSDAISAYGLGDGSFNWDKRLIT CCCCCCCEEEEEECCCEEHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCCCCEEEE VENGLCRLPNETIAGSTLPLLDACKKIANWINDPSAAIWMATLAPRMVLSQNKMTAKSFF ECCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH IGKNIKSLLRWKMNSCNHQLSWQLAA HHHHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MRKITNIKVPQPEKSEDEKNLFSLVLDEHGIILSIDKTCKKESSYDEDWHGDWLSPRAID CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCCCCCCCCEEEE LQMNGGLGISFTDLNFNKIPKLLTLLDQLWLDGVEGICPTFVSCSLDQFQLGMEVLKETK EEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHH KYTSTNRCRLLGAHMEGPFLCETYSGAHDTGSICRPSISALNERIKGFEDDIALMTLAPE HHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECHH LKGSLDVISRLRELNIVVSLGHSSADFDSAIKAFNNGVSMITHTFNAMKGLHHRAIGPIG HCCHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC AAARRDDIFLGLIGDGVHVHSDMIRLLKILAPKQIVLVSDAISAYGLGDGSFNWDKRLIT CCCCCCCEEEEEECCCEEHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCCCCCEEEE VENGLCRLPNETIAGSTLPLLDACKKIANWINDPSAAIWMATLAPRMVLSQNKMTAKSFF ECCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHH IGKNIKSLLRWKMNSCNHQLSWQLAA HHHHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969210 [H]