| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is chlM [H]
Identifier: 124024956
GI number: 124024956
Start: 224307
End: 225008
Strand: Direct
Name: chlM [H]
Synonym: NATL1_02431
Alternate gene names: 124024956
Gene position: 224307-225008 (Clockwise)
Preceding gene: 124024955
Following gene: 124024958
Centisome position: 12.03
GC content: 34.9
Gene sequence:
>702_bases ATGACAACGCAAATTGAGAAAAATGAAAAGGCGGAAGTCACTGAATATTTTAATGGGACTGGGTTTGATAGATGGAATCG AATATATAGCGAAAGTGATGATGTAAATAAAGTGCAAAAAAATATAAGGATAGGTCACCAAAAGACAGTTGATGATGTCA TTAGTTGGTTGAAAGAGTATGACAATATCAAGGATAAAAGTTTTTGTGATGCTGGCTGTGGTGTTGGTAGTTTAAGTATT CCATTGGCAAAATTGGGTGCTAAATCAATTCATTTAAGTGATATTTCTGAAGCCATGATAAACGAGACAAAAAGTAGGGC AAAGGAAGAAGGTTTGGACTTCAATAAGCTGAATTTTCGAACATCTGATTTAGAAAATTTAAAAGGTTCATTTAATACAG TTGTTTGCTTAGATGTTTTCATTCACTACCCTCAACAGAAGGCTGAGGCAATGGTGAAACATCTATGTGAATTATCTGAT GAGAGATTAATTGTTAGCTTTGCACCATACACTCCTTTACTAGCCCTTTTGAAAGGTATTGGTCAGCTATTCCCTGGACC AAGTAAAACTACTAGGGCATATACATTAAGGGAGTCCGGAATTATCGAAGCTGCAAAGCAATCTGGCTTTAAAGTTGTCA AAAGCAAGTTGAATCAAGCTCCTTTTTATTTTTCGAAATTAATAGAATTTGTGAAATCCTAG
Upstream 100 bases:
>100_bases AATATTAAGTCTTTACTTAGATGGAAAATGAATTCTTGTAATCATCAGTTGTCTTGGCAGTTGGCTGCGTAAGATTGGTA AGAGGTAATTATCTGATTAA
Downstream 100 bases:
>100_bases AGAACTAAAATTTTTAATTTTTCAAAACATATTTAGGTAACTAAATGATTTTCAAGTGCATATCTAACTAGTTCTGTTCT ACTGGAAGTACCGGTTTTAA
Product: Mg-protoporphyrin IX methyl transferase
Products: NA
Alternate protein names: Magnesium-protoporphyrin IX methyltransferase [H]
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTTQIEKNEKAEVTEYFNGTGFDRWNRIYSESDDVNKVQKNIRIGHQKTVDDVISWLKEYDNIKDKSFCDAGCGVGSLSI PLAKLGAKSIHLSDISEAMINETKSRAKEEGLDFNKLNFRTSDLENLKGSFNTVVCLDVFIHYPQQKAEAMVKHLCELSD ERLIVSFAPYTPLLALLKGIGQLFPGPSKTTRAYTLRESGIIEAAKQSGFKVVKSKLNQAPFYFSKLIEFVKS
Sequences:
>Translated_233_residues MTTQIEKNEKAEVTEYFNGTGFDRWNRIYSESDDVNKVQKNIRIGHQKTVDDVISWLKEYDNIKDKSFCDAGCGVGSLSI PLAKLGAKSIHLSDISEAMINETKSRAKEEGLDFNKLNFRTSDLENLKGSFNTVVCLDVFIHYPQQKAEAMVKHLCELSD ERLIVSFAPYTPLLALLKGIGQLFPGPSKTTRAYTLRESGIIEAAKQSGFKVVKSKLNQAPFYFSKLIEFVKS >Mature_232_residues TTQIEKNEKAEVTEYFNGTGFDRWNRIYSESDDVNKVQKNIRIGHQKTVDDVISWLKEYDNIKDKSFCDAGCGVGSLSIP LAKLGAKSIHLSDISEAMINETKSRAKEEGLDFNKLNFRTSDLENLKGSFNTVVCLDVFIHYPQQKAEAMVKHLCELSDE RLIVSFAPYTPLLALLKGIGQLFPGPSKTTRAYTLRESGIIEAAKQSGFKVVKSKLNQAPFYFSKLIEFVKS
Specific function: Converts Mg-protoporphyrin IX to Mg-protoporphyrin IX methylester using S-adenosyl-L-methionine as a cofactor [H]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010251 - InterPro: IPR010940 [H]
Pfam domain/function: PF07109 Mg-por_mtran_C [H]
EC number: =2.1.1.11 [H]
Molecular weight: Translated: 26215; Mature: 26084
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQIEKNEKAEVTEYFNGTGFDRWNRIYSESDDVNKVQKNIRIGHQKTVDDVISWLKEY CCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH DNIKDKSFCDAGCGVGSLSIPLAKLGAKSIHLSDISEAMINETKSRAKEEGLDFNKLNFR CCCCCCHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TSDLENLKGSFNTVVCLDVFIHYPQQKAEAMVKHLCELSDERLIVSFAPYTPLLALLKGI CCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH GQLFPGPSKTTRAYTLRESGIIEAAKQSGFKVVKSKLNQAPFYFSKLIEFVKS HHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC >Mature Secondary Structure TTQIEKNEKAEVTEYFNGTGFDRWNRIYSESDDVNKVQKNIRIGHQKTVDDVISWLKEY CCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH DNIKDKSFCDAGCGVGSLSIPLAKLGAKSIHLSDISEAMINETKSRAKEEGLDFNKLNFR CCCCCCHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC TSDLENLKGSFNTVVCLDVFIHYPQQKAEAMVKHLCELSDERLIVSFAPYTPLLALLKGI CCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH GQLFPGPSKTTRAYTLRESGIIEAAKQSGFKVVKSKLNQAPFYFSKLIEFVKS HHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704138; 8590279; 8905231 [H]