| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123967538
Identifier: 123967538
GI number: 123967538
Start: 1327
End: 2034
Strand: Direct
Name: 123967538
Synonym: A9601_00011
Alternate gene names: NA
Gene position: 1327-2034 (Clockwise)
Preceding gene: 123967537
Following gene: 123967539
Centisome position: 0.08
GC content: 27.26
Gene sequence:
>708_bases TTGAAATTACCTAAAGAAATTTTATTAAGTGAATTATTAAATTATATTGTTAAGGGCAATATGGTCCTTAATTATGGAAA TGGTGAAAATGTTTGGATGCATCCTCCAGTTCATCGAATTTTAGGATGGTACTCTCGTCCTTCAAATTTTGATTTAAAAA GAAATGTTTGGCGATTAAATCAAATTACTCAAATAATAGATAATGAAATTTATGTCAAAGGTGATCCAGCTATTTCGGAT TTAGCAACTTTAAATAGGTTCCCAACTTTAATAGAAGCTAATCTTATAAATATAAATGGATCAAAAATAGGAGTCATTGC AGATTTTCTATTTGAAATGAAAACGGGAAACATTAAGTATTACTTAGTTTCTAGATCTAACCCTAAGATTCCAGGTTCTA GTAGATGGAAATTAACTATTGATAATATCAATGATCAACAACCGGGATTGGTATTTTGTAAAAGCAATTCGTTAGATGAT TTATCTTTAATAAAATCAAGTATTAAAAATGAATTTATGCAAAAAGGGAAAAAAATTTTTGATAGATTTGATGATATGAA AAATATTGCTTCTAATAGATTAGAGGAATGGCTTGAAGAAGATGAAGATATAAGCGAAAATTTAGATTTTAAACAAAAAA GTTTTTATAATAACGACAGAACCTCTAGAGAGTTTAGTGAAAAAAAAGAAGATGACCCTTGGATATAA
Upstream 100 bases:
>100_bases TTAAAGTGTAATATTGCAACTACTCCAGCTGTTTTTGTACCAGAAGATAATCTCAATTCTTTTACGTATCTAGTTATGCC AGTGCAGGTTCGTTCTTAAC
Downstream 100 bases:
>100_bases ATAATGATAAATCATGAAAATAATGATCTATTTGATCTTAATGAAGCATTAAAAGTTGAAAATTTAACACTTAATGATTA CGAAGAAATTTGCAAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MKLPKEILLSELLNYIVKGNMVLNYGNGENVWMHPPVHRILGWYSRPSNFDLKRNVWRLNQITQIIDNEIYVKGDPAISD LATLNRFPTLIEANLININGSKIGVIADFLFEMKTGNIKYYLVSRSNPKIPGSSRWKLTIDNINDQQPGLVFCKSNSLDD LSLIKSSIKNEFMQKGKKIFDRFDDMKNIASNRLEEWLEEDEDISENLDFKQKSFYNNDRTSREFSEKKEDDPWI
Sequences:
>Translated_235_residues MKLPKEILLSELLNYIVKGNMVLNYGNGENVWMHPPVHRILGWYSRPSNFDLKRNVWRLNQITQIIDNEIYVKGDPAISD LATLNRFPTLIEANLININGSKIGVIADFLFEMKTGNIKYYLVSRSNPKIPGSSRWKLTIDNINDQQPGLVFCKSNSLDD LSLIKSSIKNEFMQKGKKIFDRFDDMKNIASNRLEEWLEEDEDISENLDFKQKSFYNNDRTSREFSEKKEDDPWI >Mature_235_residues MKLPKEILLSELLNYIVKGNMVLNYGNGENVWMHPPVHRILGWYSRPSNFDLKRNVWRLNQITQIIDNEIYVKGDPAISD LATLNRFPTLIEANLININGSKIGVIADFLFEMKTGNIKYYLVSRSNPKIPGSSRWKLTIDNINDQQPGLVFCKSNSLDD LSLIKSSIKNEFMQKGKKIFDRFDDMKNIASNRLEEWLEEDEDISENLDFKQKSFYNNDRTSREFSEKKEDDPWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27429; Mature: 27429
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPKEILLSELLNYIVKGNMVLNYGNGENVWMHPPVHRILGWYSRPSNFDLKRNVWRLN CCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCHHHHHHHCCCCCCCCHHHHHHHHH QITQIIDNEIYVKGDPAISDLATLNRFPTLIEANLININGSKIGVIADFLFEMKTGNIKY HHHHHHCCCEEEECCCCHHHHHHHHHCCHHEEEEEEEECCCCHHHHHHHHHHHCCCCEEE YLVSRSNPKIPGSSRWKLTIDNINDQQPGLVFCKSNSLDDLSLIKSSIKNEFMQKGKKIF EEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH DRFDDMKNIASNRLEEWLEEDEDISENLDFKQKSFYNNDRTSREFSEKKEDDPWI HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MKLPKEILLSELLNYIVKGNMVLNYGNGENVWMHPPVHRILGWYSRPSNFDLKRNVWRLN CCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCHHHHHHHCCCCCCCCHHHHHHHHH QITQIIDNEIYVKGDPAISDLATLNRFPTLIEANLININGSKIGVIADFLFEMKTGNIKY HHHHHHCCCEEEECCCCHHHHHHHHHCCHHEEEEEEEECCCCHHHHHHHHHHHCCCCEEE YLVSRSNPKIPGSSRWKLTIDNINDQQPGLVFCKSNSLDDLSLIKSSIKNEFMQKGKKIF EEEECCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH DRFDDMKNIASNRLEEWLEEDEDISENLDFKQKSFYNNDRTSREFSEKKEDDPWI HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA